RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CCDC183Q5T5S1 534 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 INTS4Q96HW7 963 aaKnown RBP6.23□□□□□ -1.41
PROM1-220ENST00000540805 DIAPH3Q9NSV4 1193 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 SPTLC3Q9NUV7 552 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 PHF8Q9UPP1 1060 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 C5P01031 1676 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 CEP85Q6P2H3 762 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 MCM10Q7L590 875 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 NEUROD6Q96NK8 337 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 GDPD2Q9HCC8 539 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 HDAC5Q9UQL6 1122 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 RIOK3O14730 519 aaKnown RBP6.23□□□□□ -1.41
PROM1-220ENST00000540805 GADD45BO75293 160 aaPredicted RBP6.23□□□□□ -1.41
PROM1-220ENST00000540805 IRX3P78415 501 aaPredicted RBP6.23□□□□□ -1.41
PROM1-220ENST00000540805 GPATCH3Q96I76 525 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 WDR33Q9C0J8 1336 aaKnown RBP6.23□□□□□ -1.41
PROM1-220ENST00000540805 DHX16O60231 1041 aaKnown RBP6.22□□□□□ -1.41
PROM1-220ENST00000540805 CHRM1P11229 460 aaPredicted RBP6.22□□□□□ -1.41
PROM1-220ENST00000540805 RIC3Q7Z5B4 369 aa6.22□□□□□ -1.41
PROM1-220ENST00000540805 USP48Q86UV5 1035 aa6.22□□□□□ -1.41
PROM1-220ENST00000540805 AXIN2Q9Y2T1 843 aa6.22□□□□□ -1.41
PROM1-220ENST00000540805 NHSL1Q5SYE7 1610 aa6.22□□□□□ -1.41
PROM1-220ENST00000540805 TPM3P06753 285 aa6.22□□□□□ -1.41
PROM1-220ENST00000540805 SLFN14P0C7P3 912 aa6.22□□□□□ -1.41
PROM1-220ENST00000540805 HCLS1P14317 486 aaPredicted RBP6.22□□□□□ -1.41
PROM1-220ENST00000540805 GYS2P54840 703 aa6.22□□□□□ -1.41
PROM1-220ENST00000540805 PARP4Q9UKK3 1724 aaKnown RBP6.22□□□□□ -1.41
PROM1-220ENST00000540805 LOC102724159A0A0B4J2E5 919 aa6.21□□□□□ -1.41
PROM1-220ENST00000540805 ANAPC15P60006 121 aa6.21□□□□□ -1.41
PROM1-220ENST00000540805 PWP2Q15269 919 aaKnown RBP6.21□□□□□ -1.41
PROM1-220ENST00000540805 NBPF6Q5VWK0 638 aa6.21□□□□□ -1.41
PROM1-220ENST00000540805 IL17REQ8NFR9 667 aa6.21□□□□□ -1.41
PROM1-220ENST00000540805 NBPF4Q96M43 638 aa6.21□□□□□ -1.41
PROM1-220ENST00000540805 COL16A1Q07092 1604 aaPredicted RBP6.21□□□□□ -1.42
PROM1-220ENST00000540805 MX1P20591 662 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 ARHGEF25Q86VW2 580 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 TMEM87AQ8NBN3 555 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 IP6K1Q92551 441 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 ESYT1Q9BSJ8 1104 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 PAPPAQ13219 1627 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 GOLGA6L6A8MZA4 724 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 KDM4AO75164 1064 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 PDE1AP54750 535 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 DRC7Q8IY82 874 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 CCDC85AQ96PX6 553 aaPredicted RBP6.21□□□□□ -1.42
PROM1-220ENST00000540805 OSBPL3Q9H4L5 887 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 TCHHQ07283 1943 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 HEG1Q9ULI3 1381 aa6.21□□□□□ -1.42
PROM1-220ENST00000540805 PTCD1O75127 700 aaKnown RBP6.2□□□□□ -1.42
PROM1-220ENST00000540805 ANO2Q9NQ90 1003 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 PYCARDQ9ULZ3 195 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 UBR2Q8IWV8 1755 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 TMEM94Q12767 1356 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 ROBO1Q9Y6N7 1651 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 DCAF8L1A6NGE4 600 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 BICDL1Q6ZP65 573 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 SPC24Q8NBT2 197 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 KIAA1524Q8TCG1 905 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 ANKRD7Q92527 254 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 WWC3Q9ULE0 1092 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 PALD1Q9ULE6 856 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 TOM1O60784 492 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 UBE2HP62256 183 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 MEIS3Q99687 375 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 SRCIN1Q9C0H9 1055 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 MRC1P22897 1456 aa6.2□□□□□ -1.42
PROM1-220ENST00000540805 TAF3Q5VWG9 929 aa6.19□□□□□ -1.42
PROM1-220ENST00000540805 NGLY1Q96IV0 654 aa6.19□□□□□ -1.42
PROM1-220ENST00000540805 FEZ1Q99689 392 aa6.19□□□□□ -1.42
PROM1-220ENST00000540805 MIS18AQ9NYP9 233 aa6.19□□□□□ -1.42
PROM1-220ENST00000540805 CNPY2Q9Y2B0 182 aa6.19□□□□□ -1.42
PROM1-220ENST00000540805 RPAP1Q9BWH6 1393 aaPredicted RBP6.19□□□□□ -1.42
PROM1-220ENST00000540805 DDX58O95786 925 aaKnown RBP6.19□□□□□ -1.42
PROM1-220ENST00000540805 OVOS2A0A0G2JMS6 1433 aa6.19□□□□□ -1.42
PROM1-220ENST00000540805 PTPRCP08575 1304 aa6.19□□□□□ -1.42
PROM1-220ENST00000540805 USHBP1Q8N6Y0 703 aa6.19□□□□□ -1.42
PROM1-220ENST00000540805 DDX17Q92841 729 aaKnown RBP6.19□□□□□ -1.42
PROM1-220ENST00000540805 UPF3BQ9BZI7 483 aaKnown RBP6.19□□□□□ -1.42
PROM1-220ENST00000540805 TOGARAM1Q9Y4F4 1720 aa6.19□□□□□ -1.42
PROM1-220ENST00000540805 MAP3K5Q99683 1374 aa6.19□□□□□ -1.42
PROM1-220ENST00000540805 CTIFO43310 598 aaKnown RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 IFIT2P09913 472 aaKnown RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 BRD2P25440 801 aaKnown RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 G3BP1Q13283 466 aaKnown RBP eCLIP6.18□□□□□ -1.42
PROM1-220ENST00000540805 TEX2Q8IWB9 1127 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 NOL10Q9BSC4 688 aaKnown RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 KCNF1Q9H3M0 494 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 OGFRQ9NZT2 677 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 ATP6V1DQ9Y5K8 247 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 AP5Z1O43299 807 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 FIBPO43427 364 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 HTATSF1O43719 755 aaKnown RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 GCP02774 474 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 ZSCAN22P10073 491 aaPredicted RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 SF3A1Q15459 793 aaKnown RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 ZNF530Q6P9A1 599 aaPredicted RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 POTEAQ6S8J7 498 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 RNF216Q9NWF9 866 aaPredicted RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 CTDP1Q9Y5B0 961 aaPredicted RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 MEGF6O75095 1541 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms