RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.34	□□□□□ -0.75
ECHDC2-222	ENST00000539680	EXOC5	O00471	708 aa		10.34	□□□□□ -0.75
ECHDC2-222	ENST00000539680	GRIPAP1	Q4V328	841 aa		10.34	□□□□□ -0.75
ECHDC2-222	ENST00000539680	HOMER2	Q9NSB8	354 aa		10.34	□□□□□ -0.75
ECHDC2-222	ENST00000539680	NES	P48681	1621 aa		10.34	□□□□□ -0.75
ECHDC2-222	ENST00000539680	METAP2	P50579	478 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
ECHDC2-222	ENST00000539680	GJB2	P29033	226 aa		10.34	□□□□□ -0.75
ECHDC2-222	ENST00000539680	CCDC152	Q4G0S7	254 aa		10.34	□□□□□ -0.75
ECHDC2-222	ENST00000539680	EXOC1	Q9NV70	894 aa		10.34	□□□□□ -0.75
ECHDC2-222	ENST00000539680	ITSN2	Q9NZM3	1697 aa		10.34	□□□□□ -0.75
ECHDC2-222	ENST00000539680	SMARCA5	O60264	1052 aa	Predicted RBP	10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	TBCA	O75347	108 aa	Known RBP	10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	C6orf163	Q5TEZ5	329 aa		10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	KLHL10	Q6JEL2	608 aa		10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CEP63	Q96MT8	703 aa		10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	TTLL12	Q14166	644 aa	Predicted RBP	10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	TMEM87A	Q8NBN3	555 aa		10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	PAXBP1	Q9Y5B6	917 aa		10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CCDC171	Q6TFL3	1326 aa		10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	URI1	O94763	535 aa	Predicted RBP	10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	RASAL2	Q9UJF2	1139 aa		10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	MAP3K2	Q9Y2U5	619 aa		10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	FSD2	A1L4K1	749 aa		10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	DENND4B	O75064	1496 aa	Predicted RBP	10.33	□□□□□ -0.76
ECHDC2-222	ENST00000539680	ABCC5	O15440	1437 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	SYCP3	Q8IZU3	236 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	SSH1	Q8WYL5	1049 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	RAPGEF3	O95398	923 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CCDC175	P0C221	793 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	GNAQ	P50148	359 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CCDC174	Q6PII3	467 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	NEK1	Q96PY6	1258 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	STMN4	Q9H169	189 aa	Predicted RBP	10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	FLII	Q13045	1269 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	HDAC9	Q9UKV0	1011 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	RTL9	Q8NET4	1388 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	STX6	O43752	255 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	UBE2H	P62256	183 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	BMP2KL	Q5H9B9	411 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CCDC102B	Q68D86	513 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	ARHGAP45	Q92619	1136 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	SSX2IP	Q9Y2D8	614 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	THOC2	Q8NI27	1593 aa	Known RBP	10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680		B4DLN1	442 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	MRPL12	P52815	198 aa	Known RBP	10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CALCOCO1	Q9P1Z2	691 aa		10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	RBM27	Q9P2N5	1060 aa	Known RBP	10.32	□□□□□ -0.76
ECHDC2-222	ENST00000539680	TTC22	Q5TAA0	569 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	TSPY2	A6NKD2	308 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	SNRPA1	P09661	255 aa	Known RBP	10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	ACTN2	P35609	894 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CEP112	Q8N8E3	955 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	NSRP1	Q9H0G5	558 aa	Known RBP	10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	MIS18A	Q9NYP9	233 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	USP16	Q9Y5T5	823 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	PRC1	O43663	620 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	HSF2BP	O75031	334 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CALM1	P0DP23	149 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CALM2	P0DP24	149 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CALM3	P0DP25	149 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	TNNT1	P13805	278 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	TUBB4B	P68371	445 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	XPC	Q01831	940 aa	Predicted RBP	10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CTR9	Q6PD62	1173 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	SPATA24	Q86W54	205 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CCDC155	Q8N6L0	562 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	NAP1L4	Q99733	375 aa	Known RBP	10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	SPDYE4	A6NLX3	237 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	SPAG1	Q07617	926 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	KIF4A	O95239	1232 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	TMC6	Q7Z403	805 aa		10.31	□□□□□ -0.76
ECHDC2-222	ENST00000539680	SNW1	Q13573	536 aa	Known RBP	10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	SELENOO	Q9BVL4	669 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	PTCD1	O75127	700 aa	Known RBP	10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	FERMT3	Q86UX7	667 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	NME9	Q86XW9	330 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	FMNL3	Q8IVF7	1028 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	KCNG4	Q8TDN1	519 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	IKBKG	Q9Y6K9	419 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	TMCO5B	A8MYB1	307 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	GNAT2	P19087	354 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	ANKRD24	Q8TF21	1146 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	LMBR1	Q8WVP7	490 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	UTP14A	Q9BVJ6	771 aa	Known RBP	10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	AMOTL2	Q9Y2J4	779 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	GRIN2A	Q12879	1464 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	KRT13	P13646	458 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	CYLC1	P35663	651 aa	Predicted RBP	10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	UBA7	P41226	1012 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	MPRIP	Q6WCQ1	1025 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	BICD1	Q96G01	975 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	COMMD10	Q9Y6G5	202 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	NUP160	Q12769	1436 aa		10.3	□□□□□ -0.76
ECHDC2-222	ENST00000539680	LMAN1	P49257	510 aa		10.29	□□□□□ -0.76
ECHDC2-222	ENST00000539680	KRT28	Q7Z3Y7	464 aa		10.29	□□□□□ -0.76
ECHDC2-222	ENST00000539680	SMARCC1	Q92922	1105 aa	Predicted RBP	10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms