RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ANKRD1Q15327 319 aa20.84■□□□□ 0.93
RAB40C-205ENST00000539661 ALDH8A1Q9H2A2 487 aaPredicted RBP20.84■□□□□ 0.93
RAB40C-205ENST00000539661 CAMK4Q16566 473 aa20.84■□□□□ 0.93
RAB40C-205ENST00000539661 NECTIN2Q92692 538 aa20.84■□□□□ 0.93
RAB40C-205ENST00000539661 CDC37L1Q7L3B6 337 aa20.83■□□□□ 0.93
RAB40C-205ENST00000539661 EYA1Q99502 592 aa20.83■□□□□ 0.93
RAB40C-205ENST00000539661 ADAMTS13Q76LX8 1427 aa20.83■□□□□ 0.93
RAB40C-205ENST00000539661 HDGFP51858 240 aaKnown RBP20.83■□□□□ 0.92
RAB40C-205ENST00000539661 TAF7Q15545 349 aaPredicted RBP20.83■□□□□ 0.92
RAB40C-205ENST00000539661 NUTM2GQ5VZR2 741 aa20.83■□□□□ 0.92
RAB40C-205ENST00000539661 GPATCH3Q96I76 525 aa20.83■□□□□ 0.92
RAB40C-205ENST00000539661 SPATA32Q96LK8 384 aa20.83■□□□□ 0.92
RAB40C-205ENST00000539661 TPCN1Q9ULQ1 816 aa20.83■□□□□ 0.92
RAB40C-205ENST00000539661 HIP1O00291 1037 aa20.82■□□□□ 0.92
RAB40C-205ENST00000539661 TPD52L1Q16890 204 aaPredicted RBP20.82■□□□□ 0.92
RAB40C-205ENST00000539661 HDGFL1Q5TGJ6 251 aa20.82■□□□□ 0.92
RAB40C-205ENST00000539661 CKAP2LQ8IYA6 745 aa20.82■□□□□ 0.92
RAB40C-205ENST00000539661 EVI5LQ96CN4 794 aa20.82■□□□□ 0.92
RAB40C-205ENST00000539661 CHMP4AQ9BY43 222 aa20.82■□□□□ 0.92
RAB40C-205ENST00000539661 ECHDC1Q9NTX5 307 aa20.82■□□□□ 0.92
RAB40C-205ENST00000539661 CLIP2Q9UDT6 1046 aa20.82■□□□□ 0.92
RAB40C-205ENST00000539661 NRBP1Q9UHY1 535 aa20.82■□□□□ 0.92
RAB40C-205ENST00000539661 ZNF165P49910 485 aa20.81■□□□□ 0.92
RAB40C-205ENST00000539661 CLASRPQ8N2M8 674 aaKnown RBP20.81■□□□□ 0.92
RAB40C-205ENST00000539661 NECAB1Q8N987 351 aa20.81■□□□□ 0.92
RAB40C-205ENST00000539661 PTPRUQ92729 1446 aa20.81■□□□□ 0.92
RAB40C-205ENST00000539661 CREB3L3Q68CJ9 461 aa20.81■□□□□ 0.92
RAB40C-205ENST00000539661 SARM1Q6SZW1 724 aa20.81■□□□□ 0.92
RAB40C-205ENST00000539661 ZNF771Q7L3S4 317 aaPredicted RBP20.81■□□□□ 0.92
RAB40C-205ENST00000539661 LEO1Q8WVC0 666 aaPredicted RBP20.81■□□□□ 0.92
RAB40C-205ENST00000539661 SNRKQ9NRH2 765 aa20.81■□□□□ 0.92
RAB40C-205ENST00000539661 AMOTL2Q9Y2J4 779 aa20.81■□□□□ 0.92
RAB40C-205ENST00000539661 GIGYF1O75420 1035 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-205ENST00000539661 MTX1Q13505 466 aa20.8■□□□□ 0.92
RAB40C-205ENST00000539661 RBM6P78332 1123 aaKnown RBP20.8■□□□□ 0.92
RAB40C-205ENST00000539661 CEP135Q66GS9 1140 aa20.8■□□□□ 0.92
RAB40C-205ENST00000539661 CACTINQ8WUQ7 758 aaKnown RBP20.8■□□□□ 0.92
RAB40C-205ENST00000539661 MAP4K1Q92918 833 aa20.8■□□□□ 0.92
RAB40C-205ENST00000539661 RBM8AQ9Y5S9 174 aaKnown RBP20.8■□□□□ 0.92
RAB40C-205ENST00000539661 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.79■□□□□ 0.92
RAB40C-205ENST00000539661 KIF18AQ8NI77 898 aa20.79■□□□□ 0.92
RAB40C-205ENST00000539661 CHMP3Q9Y3E7 222 aa20.79■□□□□ 0.92
RAB40C-205ENST00000539661 UBR1Q8IWV7 1749 aa20.79■□□□□ 0.92
RAB40C-205ENST00000539661 ERC1Q8IUD2 1116 aa20.79■□□□□ 0.92
RAB40C-205ENST00000539661 PHAXQ9H814 394 aaKnown RBP20.79■□□□□ 0.92
RAB40C-205ENST00000539661 FERMT3Q86UX7 667 aa20.78■□□□□ 0.92
RAB40C-205ENST00000539661 ZNF397Q8NF99 534 aaPredicted RBP20.78■□□□□ 0.92
RAB40C-205ENST00000539661 MRFAP1L1Q96HT8 127 aa20.78■□□□□ 0.92
RAB40C-205ENST00000539661 NBPF7P0C2Y1 421 aaPredicted RBP20.78■□□□□ 0.92
RAB40C-205ENST00000539661 BEND3Q5T5X7 828 aa20.78■□□□□ 0.92
RAB40C-205ENST00000539661 IL17REQ8NFR9 667 aa20.78■□□□□ 0.92
RAB40C-205ENST00000539661 OS9Q13438 667 aaPredicted RBP20.77■□□□□ 0.92
RAB40C-205ENST00000539661 RNF20Q5VTR2 975 aa20.77■□□□□ 0.92
RAB40C-205ENST00000539661 HOXB7P09629 217 aa20.77■□□□□ 0.92
RAB40C-205ENST00000539661 AMPHP49418 695 aa20.77■□□□□ 0.92
RAB40C-205ENST00000539661 FAM193AP78312 1265 aa20.77■□□□□ 0.92
RAB40C-205ENST00000539661 LRRC8AQ8IWT6 810 aa20.77■□□□□ 0.92
RAB40C-205ENST00000539661 SLFN14P0C7P3 912 aa20.76■□□□□ 0.91
RAB40C-205ENST00000539661 KRT222Q8N1A0 295 aa20.76■□□□□ 0.91
RAB40C-205ENST00000539661 DNAAF4Q8WXU2 420 aa20.76■□□□□ 0.91
RAB40C-205ENST00000539661 SLC27A2O14975 620 aa20.76■□□□□ 0.91
RAB40C-205ENST00000539661 KCNJ4P48050 445 aa20.76■□□□□ 0.91
RAB40C-205ENST00000539661 FAM173BQ6P4H8 233 aa20.76■□□□□ 0.91
RAB40C-205ENST00000539661 BLOC1S2Q6QNY1 142 aa20.76■□□□□ 0.91
RAB40C-205ENST00000539661 DNAJC25Q9H1X3 360 aa20.76■□□□□ 0.91
RAB40C-205ENST00000539661 KCND1Q9NSA2 647 aa20.76■□□□□ 0.91
RAB40C-205ENST00000539661 SLFNL1Q499Z3 407 aa20.75■□□□□ 0.91
RAB40C-205ENST00000539661 NYAP1Q6ZVC0 841 aa20.75■□□□□ 0.91
RAB40C-205ENST00000539661 NR1I2O75469 434 aa20.75■□□□□ 0.91
RAB40C-205ENST00000539661 CCDC144BQ3MJ40 725 aa20.75■□□□□ 0.91
RAB40C-205ENST00000539661 CCDC144CPQ8IYA2 1237 aa20.75■□□□□ 0.91
RAB40C-205ENST00000539661 GOLGA6L19H0YKK7 550 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 IFIT2P09913 472 aaKnown RBP20.74■□□□□ 0.91
RAB40C-205ENST00000539661 RPS6KB1P23443 525 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 LARP1Q6PKG0 1096 aaKnown RBP20.74■□□□□ 0.91
RAB40C-205ENST00000539661 BICD2Q8TD16 824 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 FAM53CQ9NYF3 392 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 HDAC5Q9UQL6 1122 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 CTAGE5O15320 804 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 IQCB1Q15051 598 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 PTPN14Q15678 1187 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 ERO1AQ96HE7 468 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 TFIP11Q9UBB9 837 aaKnown RBP20.74■□□□□ 0.91
RAB40C-205ENST00000539661 TSGA10IPQ3SY00 556 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 PGBD1Q96JS3 809 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 HMG20BQ9P0W2 317 aa20.74■□□□□ 0.91
RAB40C-205ENST00000539661 KIF2AO00139 706 aaPredicted RBP20.73■□□□□ 0.91
RAB40C-205ENST00000539661 CREBRFQ8IUR6 639 aa20.73■□□□□ 0.91
RAB40C-205ENST00000539661 DTNBO60941 627 aa20.73■□□□□ 0.91
RAB40C-205ENST00000539661 IGSF3O75054 1194 aa20.73■□□□□ 0.91
RAB40C-205ENST00000539661 NWD1Q149M9 1564 aa20.73■□□□□ 0.91
RAB40C-205ENST00000539661 TERF2Q15554 542 aa20.73■□□□□ 0.91
RAB40C-205ENST00000539661 ZSCAN16Q9H4T2 348 aaPredicted RBP20.73■□□□□ 0.91
RAB40C-205ENST00000539661 NPHP4O75161 1426 aaPredicted RBP20.72■□□□□ 0.91
RAB40C-205ENST00000539661 KCNA6P17658 529 aa20.72■□□□□ 0.91
RAB40C-205ENST00000539661 NAA30Q147X3 362 aaPredicted RBP20.72■□□□□ 0.91
RAB40C-205ENST00000539661 CFAP45Q9UL16 551 aa20.72■□□□□ 0.91
RAB40C-205ENST00000539661 EID1Q9Y6B2 187 aa20.72■□□□□ 0.91
RAB40C-205ENST00000539661 JCADQ9P266 1359 aa20.71■□□□□ 0.91
RAB40C-205ENST00000539661 CCDC66A2RUB6 948 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms