RNA–Protein interactions for RNA: ENST00000539594.5

ESRRA-206, Transcript of estrogen related receptor alpha, humanhuman

TSL 3

Gene ESRRA, Length 747 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-206ENST00000539594 RIC3Q7Z5B4 369 aa36.05■■■■□ 3.36
ESRRA-206ENST00000539594 SPINK5Q9NQ38 1064 aaPredicted RBP36.05■■■■□ 3.36
ESRRA-206ENST00000539594 EXOSC9Q06265 439 aaKnown RBP36.04■■■■□ 3.36
ESRRA-206ENST00000539594 ZNF784Q8NCA9 323 aaPredicted RBP36.03■■■■□ 3.36
ESRRA-206ENST00000539594 CRY2Q49AN0 593 aa36.02■■■■□ 3.36
ESRRA-206ENST00000539594 ISCA1Q9BUE6 129 aa36.02■■■■□ 3.36
ESRRA-206ENST00000539594 VAMP4O75379 141 aa36.01■■■■□ 3.36
ESRRA-206ENST00000539594 SLC10A5Q5PT55 438 aa36.01■■■■□ 3.36
ESRRA-206ENST00000539594 CACNA1SQ13698 1873 aa36.01■■■■□ 3.35
ESRRA-206ENST00000539594 TNRC6CQ9HCJ0 1690 aaKnown RBP36■■■■□ 3.35
ESRRA-206ENST00000539594 ALDH1B1P30837 517 aa36■■■■□ 3.35
ESRRA-206ENST00000539594 TRIM28Q13263 835 aaKnown RBP36■■■■□ 3.35
ESRRA-206ENST00000539594 SOGA3Q5TF21 947 aa36■■■■□ 3.35
ESRRA-206ENST00000539594 TRMT112Q9UI30 125 aaKnown RBP36■■■■□ 3.35
ESRRA-206ENST00000539594 SLX4Q8IY92 1834 aa35.99■■■■□ 3.35
ESRRA-206ENST00000539594 PRPF40BQ6NWY9 871 aaKnown RBP35.99■■■■□ 3.35
ESRRA-206ENST00000539594 MIER1Q8N108 512 aa35.99■■■■□ 3.35
ESRRA-206ENST00000539594 ADCY9O60503 1353 aa35.99■■■■□ 3.35
ESRRA-206ENST00000539594 NLRP3Q96P20 1036 aa35.98■■■■□ 3.35
ESRRA-206ENST00000539594 SH3TC1Q8TE82 1336 aa35.98■■■■□ 3.35
ESRRA-206ENST00000539594 E9PSI1 815 aa35.97■■■■□ 3.35
ESRRA-206ENST00000539594 SLC4A2P04920 1241 aa35.97■■■■□ 3.35
ESRRA-206ENST00000539594 RPGRQ92834 1020 aaKnown RBP35.96■■■■□ 3.35
ESRRA-206ENST00000539594 SBF1O95248 1867 aa35.96■■■■□ 3.35
ESRRA-206ENST00000539594 C21orf2O43822 256 aa35.95■■■■□ 3.35
ESRRA-206ENST00000539594 KSR2Q6VAB6 950 aa35.95■■■■□ 3.35
ESRRA-206ENST00000539594 ATP5J2-PTCD1G3V325 749 aa35.94■■■■□ 3.34
ESRRA-206ENST00000539594 TCERG1O14776 1098 aaKnown RBP35.94■■■■□ 3.34
ESRRA-206ENST00000539594 HOXA10P31260 410 aaPredicted RBP35.94■■■■□ 3.34
ESRRA-206ENST00000539594 METTL22Q9BUU2 404 aaPredicted RBP35.94■■■■□ 3.34
ESRRA-206ENST00000539594 C9orf131Q5VYM1 1079 aa35.92■■■■□ 3.34
ESRRA-206ENST00000539594 RBM17Q96I25 401 aaKnown RBP35.92■■■■□ 3.34
ESRRA-206ENST00000539594 MYD88Q99836 296 aa35.92■■■■□ 3.34
ESRRA-206ENST00000539594 FER1L6Q2WGJ9 1857 aa35.92■■■■□ 3.34
ESRRA-206ENST00000539594 CCDC191Q8NCU4 936 aa35.91■■■■□ 3.34
ESRRA-206ENST00000539594 ZNF219Q9P2Y4 722 aaPredicted RBP35.91■■■■□ 3.34
ESRRA-206ENST00000539594 MAP3K2Q9Y2U5 619 aa35.91■■■■□ 3.34
ESRRA-206ENST00000539594 PI4KAP2A4QPH2 592 aa35.9■■■■□ 3.34
ESRRA-206ENST00000539594 PI4KAP1Q8N8J0 262 aa35.9■■■■□ 3.34
ESRRA-206ENST00000539594 CRAMP1Q96RY5 1269 aa35.9■■■■□ 3.34
ESRRA-206ENST00000539594 FLIIQ13045 1269 aa35.89■■■■□ 3.34
ESRRA-206ENST00000539594 C7orf43Q8WVR3 580 aa35.89■■■■□ 3.34
ESRRA-206ENST00000539594 LMNB1P20700 586 aa35.88■■■■□ 3.33
ESRRA-206ENST00000539594 SLFN5Q08AF3 891 aa35.88■■■■□ 3.33
ESRRA-206ENST00000539594 NEXNQ0ZGT2 675 aa35.88■■■■□ 3.33
ESRRA-206ENST00000539594 RNF181Q9P0P0 153 aa35.88■■■■□ 3.33
ESRRA-206ENST00000539594 LTBP3Q9NS15 1303 aa35.87■■■■□ 3.33
ESRRA-206ENST00000539594 NFKBIEO00221 500 aa35.87■■■■□ 3.33
ESRRA-206ENST00000539594 HCLS1P14317 486 aaPredicted RBP35.87■■■■□ 3.33
ESRRA-206ENST00000539594 HSP90B1P14625 803 aaKnown RBP35.87■■■■□ 3.33
ESRRA-206ENST00000539594 RASSF7Q02833 373 aa35.87■■■■□ 3.33
ESRRA-206ENST00000539594 CCDC93Q567U6 631 aa35.87■■■■□ 3.33
ESRRA-206ENST00000539594 G2E3Q7L622 706 aa35.87■■■■□ 3.33
ESRRA-206ENST00000539594 ZBTB38Q8NAP3 1195 aaPredicted RBP35.86■■■■□ 3.33
ESRRA-206ENST00000539594 FAM89AQ96GI7 184 aa35.86■■■■□ 3.33
ESRRA-206ENST00000539594 CWC25Q9NXE8 425 aaPredicted RBP35.86■■■■□ 3.33
ESRRA-206ENST00000539594 LAMB2P55268 1798 aa35.86■■■■□ 3.33
ESRRA-206ENST00000539594 C3orf67Q6ZVT6 689 aa35.85■■■■□ 3.33
ESRRA-206ENST00000539594 SYNE4Q8N205 404 aa35.85■■■■□ 3.33
ESRRA-206ENST00000539594 TAOK3Q9H2K8 898 aa35.85■■■■□ 3.33
ESRRA-206ENST00000539594 CCDC88AQ3V6T2 1871 aa35.85■■■■□ 3.33
ESRRA-206ENST00000539594 ZC3H4Q9UPT8 1303 aaKnown RBP35.84■■■■□ 3.33
ESRRA-206ENST00000539594 FKBP5Q13451 457 aaPredicted RBP35.84■■■■□ 3.33
ESRRA-206ENST00000539594 CC2D2BQ6DHV5 1058 aa35.84■■■■□ 3.33
ESRRA-206ENST00000539594 DDX60Q8IY21 1712 aaKnown RBP35.83■■■■□ 3.33
ESRRA-206ENST00000539594 RTKN2Q8IZC4 609 aa35.83■■■■□ 3.33
ESRRA-206ENST00000539594 GRIPAP1Q4V328 841 aa35.81■■■■□ 3.32
ESRRA-206ENST00000539594 GPBP1L1Q9HC44 474 aaPredicted RBP35.81■■■■□ 3.32
ESRRA-206ENST00000539594 PCCAP05165 728 aaPredicted RBP35.8■■■■□ 3.32
ESRRA-206ENST00000539594 ZNF428Q96B54 188 aa35.8■■■■□ 3.32
ESRRA-206ENST00000539594 DICER1Q9UPY3 1922 aaKnown RBP35.79■■■■□ 3.32
ESRRA-206ENST00000539594 IRS4O14654 1257 aaPredicted RBP35.79■■■■□ 3.32
ESRRA-206ENST00000539594 DDX46Q7L014 1031 aaKnown RBP35.79■■■■□ 3.32
ESRRA-206ENST00000539594 SF3B3Q15393 1217 aaKnown RBP35.78■■■■□ 3.32
ESRRA-206ENST00000539594 TRMT2AQ8IZ69 625 aaKnown RBP35.78■■■■□ 3.32
ESRRA-206ENST00000539594 DNAAF4Q8WXU2 420 aa35.78■■■■□ 3.32
ESRRA-206ENST00000539594 TMX4Q9H1E5 349 aaPredicted RBP35.78■■■■□ 3.32
ESRRA-206ENST00000539594 PPEF1O14829 653 aaPredicted RBP35.77■■■■□ 3.32
ESRRA-206ENST00000539594 BBOX1O75936 387 aa35.77■■■■□ 3.32
ESRRA-206ENST00000539594 IGKV5-2P06315 115 aa35.77■■■■□ 3.32
ESRRA-206ENST00000539594 RTL5Q5HYW3 569 aaPredicted RBP35.77■■■■□ 3.32
ESRRA-206ENST00000539594 CDCA7LQ96GN5 454 aa35.77■■■■□ 3.32
ESRRA-206ENST00000539594 ABCC4O15439 1325 aa35.77■■■■□ 3.32
ESRRA-206ENST00000539594 FKBP4Q02790 459 aaKnown RBP eCLIP35.76■■■■□ 3.321e-6■■■■□ 24.8
ESRRA-206ENST00000539594 PRELPP51888 382 aa35.75■■■■□ 3.31
ESRRA-206ENST00000539594 NEURL1BA8MQ27 555 aa35.74■■■■□ 3.31
ESRRA-206ENST00000539594 ZNF526Q8TF50 670 aaPredicted RBP35.74■■■■□ 3.31
ESRRA-206ENST00000539594 GRAPQ13588 217 aa35.73■■■■□ 3.31
ESRRA-206ENST00000539594 LINS1Q8NG48 757 aa35.73■■■■□ 3.31
ESRRA-206ENST00000539594 GRAPLQ8TC17 118 aaPredicted RBP35.73■■■■□ 3.31
ESRRA-206ENST00000539594 CDHR2Q9BYE9 1310 aa35.73■■■■□ 3.31
ESRRA-206ENST00000539594 TIAM2Q8IVF5 1701 aa35.72■■■■□ 3.31
ESRRA-206ENST00000539594 CT47B1P0C2W7 299 aaPredicted RBP35.72■■■■□ 3.31
ESRRA-206ENST00000539594 TMC4Q7Z404 712 aa35.72■■■■□ 3.31
ESRRA-206ENST00000539594 PSMD1Q99460 953 aa35.72■■■■□ 3.31
ESRRA-206ENST00000539594 ATP6V0A2Q9Y487 856 aa35.72■■■■□ 3.31
ESRRA-206ENST00000539594 PDE8AO60658 829 aa35.71■■■■□ 3.31
ESRRA-206ENST00000539594 CWF19L2Q2TBE0 894 aaKnown RBP35.71■■■■□ 3.31
ESRRA-206ENST00000539594 OLFM4Q6UX06 510 aa35.71■■■■□ 3.31
ESRRA-206ENST00000539594 KDM2BQ8NHM5 1336 aa35.7■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms