RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 CCDC136Q96JN2 1154 aa14.35□□□□□ -0.11
FAM60A-206ENST00000539409 QSER1Q2KHR3 1735 aa14.35□□□□□ -0.11
FAM60A-206ENST00000539409 GNAI2P04899 355 aa14.35□□□□□ -0.11
FAM60A-206ENST00000539409 COL24A1Q17RW2 1714 aa14.34□□□□□ -0.11
FAM60A-206ENST00000539409 LRRFIP2Q9Y608 721 aaKnown RBP14.34□□□□□ -0.11
FAM60A-206ENST00000539409 CASP7P55210 303 aa14.34□□□□□ -0.11
FAM60A-206ENST00000539409 UPF1Q92900 1129 aaKnown RBP eCLIP14.34□□□□□ -0.118e-9■■■■□ 21
FAM60A-206ENST00000539409 UBE3BQ7Z3V4 1068 aa14.33□□□□□ -0.12
FAM60A-206ENST00000539409 H7C1W4 665 aa14.33□□□□□ -0.12
FAM60A-206ENST00000539409 NIP7Q9Y221 180 aaKnown RBP eCLIP14.33□□□□□ -0.12
FAM60A-206ENST00000539409 PNPLA7Q6ZV29 1317 aa14.32□□□□□ -0.12
FAM60A-206ENST00000539409 SLC15A2Q16348 729 aa14.32□□□□□ -0.12
FAM60A-206ENST00000539409 CEP85Q6P2H3 762 aa14.32□□□□□ -0.12
FAM60A-206ENST00000539409 SIRT2Q8IXJ6 389 aa14.32□□□□□ -0.12
FAM60A-206ENST00000539409 JARID2Q92833 1246 aaPredicted RBP14.32□□□□□ -0.12
FAM60A-206ENST00000539409 KAZALD1Q96I82 304 aa14.32□□□□□ -0.12
FAM60A-206ENST00000539409 TBC1D9BQ66K14 1250 aa14.32□□□□□ -0.12
FAM60A-206ENST00000539409 COL23A1Q86Y22 540 aaPredicted RBP14.32□□□□□ -0.12
FAM60A-206ENST00000539409 SUCLG2Q96I99 432 aa14.32□□□□□ -0.12
FAM60A-206ENST00000539409 PCCAP05165 728 aaPredicted RBP14.31□□□□□ -0.12
FAM60A-206ENST00000539409 GYS1P13807 737 aa14.31□□□□□ -0.12
FAM60A-206ENST00000539409 PARP10Q53GL7 1025 aa14.31□□□□□ -0.12
FAM60A-206ENST00000539409 ANKRD44Q8N8A2 993 aa14.31□□□□□ -0.12
FAM60A-206ENST00000539409 FLAD1Q8NFF5 587 aa14.31□□□□□ -0.12
FAM60A-206ENST00000539409 STK32BQ9NY57 414 aa14.31□□□□□ -0.12
FAM60A-206ENST00000539409 KDM2BQ8NHM5 1336 aa14.31□□□□□ -0.12
FAM60A-206ENST00000539409 IGHDP01880 384 aa14.31□□□□□ -0.12
FAM60A-206ENST00000539409 HDAC1Q13547 482 aaPredicted RBP14.31□□□□□ -0.12
FAM60A-206ENST00000539409 RTL5Q5HYW3 569 aaPredicted RBP14.31□□□□□ -0.12
FAM60A-206ENST00000539409 ZBTB38Q8NAP3 1195 aaPredicted RBP14.31□□□□□ -0.12
FAM60A-206ENST00000539409 SUSD4Q5VX71 490 aa14.3□□□□□ -0.12
FAM60A-206ENST00000539409 RPAP2Q8IXW5 612 aaPredicted RBP14.3□□□□□ -0.12
FAM60A-206ENST00000539409 FAM89AQ96GI7 184 aa14.3□□□□□ -0.12
FAM60A-206ENST00000539409 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
FAM60A-206ENST00000539409 TRMT112Q9UI30 125 aaKnown RBP14.3□□□□□ -0.12
FAM60A-206ENST00000539409 LAMB2P55268 1798 aa14.29□□□□□ -0.12
FAM60A-206ENST00000539409 NTSR2O95665 410 aa14.29□□□□□ -0.12
FAM60A-206ENST00000539409 BICDL1Q6ZP65 573 aa14.29□□□□□ -0.12
FAM60A-206ENST00000539409 BICC1Q9H694 974 aaKnown RBP14.29□□□□□ -0.12
FAM60A-206ENST00000539409 CDHR2Q9BYE9 1310 aa14.29□□□□□ -0.12
FAM60A-206ENST00000539409 EPHA10Q5JZY3 1008 aa14.29□□□□□ -0.12
FAM60A-206ENST00000539409 ILDR2Q71H61 639 aa14.29□□□□□ -0.12
FAM60A-206ENST00000539409 SYNE4Q8N205 404 aa14.29□□□□□ -0.12
FAM60A-206ENST00000539409 UTP14AQ9BVJ6 771 aaKnown RBP14.29□□□□□ -0.12
FAM60A-206ENST00000539409 DDX60Q8IY21 1712 aaKnown RBP14.28□□□□□ -0.12
FAM60A-206ENST00000539409 PNMA6EA0A0J9YXQ4 647 aa14.28□□□□□ -0.12
FAM60A-206ENST00000539409 MTX1Q13505 466 aa14.28□□□□□ -0.12
FAM60A-206ENST00000539409 SETDB2Q96T68 719 aa14.28□□□□□ -0.12
FAM60A-206ENST00000539409 RWDD1Q9H446 243 aaPredicted RBP14.28□□□□□ -0.12
FAM60A-206ENST00000539409 CARMIL3Q8ND23 1372 aa14.28□□□□□ -0.12
FAM60A-206ENST00000539409 FAM177BA6PVY3 158 aa14.28□□□□□ -0.12
FAM60A-206ENST00000539409 NFIXQ14938 502 aa14.28□□□□□ -0.12
FAM60A-206ENST00000539409 PPP1R42Q7Z4L9 355 aa14.28□□□□□ -0.12
FAM60A-206ENST00000539409 SH3TC1Q8TE82 1336 aa14.27□□□□□ -0.12
FAM60A-206ENST00000539409 MSH5O43196 834 aa14.27□□□□□ -0.13
FAM60A-206ENST00000539409 FOXO4P98177 505 aa14.27□□□□□ -0.13
FAM60A-206ENST00000539409 ATP8B2P98198 1209 aa14.27□□□□□ -0.13
FAM60A-206ENST00000539409 RABL6Q3YEC7 729 aaPredicted RBP14.27□□□□□ -0.13
FAM60A-206ENST00000539409 CENPQQ7L2Z9 268 aaPredicted RBP14.27□□□□□ -0.13
FAM60A-206ENST00000539409 MYH3P11055 1940 aa14.27□□□□□ -0.13
FAM60A-206ENST00000539409 PLA2G12BQ9BX93 195 aa14.26□□□□□ -0.13
FAM60A-206ENST00000539409 IRS4O14654 1257 aaPredicted RBP14.25□□□□□ -0.13
FAM60A-206ENST00000539409 SRGAP3O43295 1099 aa14.25□□□□□ -0.13
FAM60A-206ENST00000539409 HMMRO75330 724 aa14.25□□□□□ -0.13
FAM60A-206ENST00000539409 NUTM1Q86Y26 1132 aa14.25□□□□□ -0.13
FAM60A-206ENST00000539409 SSH3Q8TE77 659 aa14.25□□□□□ -0.13
FAM60A-206ENST00000539409 TM4SF1P30408 202 aa14.25□□□□□ -0.13
FAM60A-206ENST00000539409 POLA2Q14181 598 aa14.25□□□□□ -0.13
FAM60A-206ENST00000539409 CASZ1Q86V15 1759 aa14.25□□□□□ -0.13
FAM60A-206ENST00000539409 NBPF5PQ86XG9 351 aaPredicted RBP14.24□□□□□ -0.13
FAM60A-206ENST00000539409 NYXQ9GZU5 481 aa14.24□□□□□ -0.13
FAM60A-206ENST00000539409 ABCC12Q96J65 1359 aa14.24□□□□□ -0.13
FAM60A-206ENST00000539409 LMBR1LQ6UX01 489 aa14.24□□□□□ -0.13
FAM60A-206ENST00000539409 NLGN1Q8N2Q7 840 aa14.24□□□□□ -0.13
FAM60A-206ENST00000539409 DDR1Q08345 913 aa14.23□□□□□ -0.13
FAM60A-206ENST00000539409 ERFEQ4G0M1 354 aa14.23□□□□□ -0.13
FAM60A-206ENST00000539409 SMC5Q8IY18 1101 aa14.23□□□□□ -0.13
FAM60A-206ENST00000539409 PDGFDQ9GZP0 370 aaPredicted RBP14.23□□□□□ -0.13
FAM60A-206ENST00000539409 NRXN2Q9P2S2 1712 aa14.23□□□□□ -0.13
FAM60A-206ENST00000539409 HCLS1P14317 486 aaPredicted RBP14.23□□□□□ -0.13
FAM60A-206ENST00000539409 CTSWP56202 376 aa14.23□□□□□ -0.13
FAM60A-206ENST00000539409 TNRC6CQ9HCJ0 1690 aaKnown RBP14.23□□□□□ -0.13
FAM60A-206ENST00000539409 POLRMTO00411 1230 aaKnown RBP14.22□□□□□ -0.13
FAM60A-206ENST00000539409 PDE8AO60658 829 aa14.22□□□□□ -0.13
FAM60A-206ENST00000539409 DCTPP1Q9H773 170 aa14.22□□□□□ -0.13
FAM60A-206ENST00000539409 CSF1RP07333 972 aa14.22□□□□□ -0.13
FAM60A-206ENST00000539409 MSL1Q68DK7 614 aa14.22□□□□□ -0.13
FAM60A-206ENST00000539409 TPTE2Q6XPS3 522 aa14.22□□□□□ -0.13
FAM60A-206ENST00000539409 CNBD1Q8NA66 436 aa14.21□□□□□ -0.13
FAM60A-206ENST00000539409 GCC1Q96CN9 775 aa14.21□□□□□ -0.13
FAM60A-206ENST00000539409 HSP90B1P14625 803 aaKnown RBP14.21□□□□□ -0.13
FAM60A-206ENST00000539409 RFX5P48382 616 aaPredicted RBP14.21□□□□□ -0.13
FAM60A-206ENST00000539409 SLC10A5Q5PT55 438 aa14.21□□□□□ -0.13
FAM60A-206ENST00000539409 TTLL11Q8NHH1 800 aa14.21□□□□□ -0.13
FAM60A-206ENST00000539409 RIC1Q4ADV7 1423 aa14.2□□□□□ -0.14
FAM60A-206ENST00000539409 SERPINB2P05120 415 aa14.2□□□□□ -0.14
FAM60A-206ENST00000539409 GTF2E1P29083 439 aaPredicted RBP14.2□□□□□ -0.14
FAM60A-206ENST00000539409 FAM161AQ3B820 660 aa14.2□□□□□ -0.14
FAM60A-206ENST00000539409 PRR5LQ6MZQ0 368 aa14.2□□□□□ -0.14
FAM60A-206ENST00000539409 CHMP3Q9Y3E7 222 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms