RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 PDE3BQ13370 1112 aa5.22□□□□□ -1.57
SNHG1-210ENST00000539303 GRIN2CQ14957 1233 aa5.22□□□□□ -1.57
SNHG1-210ENST00000539303 COL19A1Q14993 1142 aa5.22□□□□□ -1.57
SNHG1-210ENST00000539303 CTC1Q2NKJ3 1217 aa5.22□□□□□ -1.57
SNHG1-210ENST00000539303 WDR44Q5JSH3 913 aa5.22□□□□□ -1.57
SNHG1-210ENST00000539303 IER5Q5VY09 327 aa5.22□□□□□ -1.57
SNHG1-210ENST00000539303 CMTR1Q8N1G2 835 aaKnown RBP5.22□□□□□ -1.57
SNHG1-210ENST00000539303 CRIPAKQ8N1N5 446 aa5.22□□□□□ -1.57
SNHG1-210ENST00000539303 ALKBH8Q96BT7 664 aaKnown RBP5.22□□□□□ -1.57
SNHG1-210ENST00000539303 DUSP9Q99956 384 aaKnown RBP5.22□□□□□ -1.57
SNHG1-210ENST00000539303 ZCCHC2Q9C0B9 1178 aaKnown RBP5.22□□□□□ -1.57
SNHG1-210ENST00000539303 ATP13A2Q9NQ11 1180 aa5.22□□□□□ -1.57
SNHG1-210ENST00000539303 HCN2Q9UL51 889 aa5.22□□□□□ -1.57
SNHG1-210ENST00000539303 RTCBQ9Y3I0 505 aaKnown RBP5.22□□□□□ -1.57
SNHG1-210ENST00000539303 KCNMB2Q9Y691 235 aa5.22□□□□□ -1.57
SNHG1-210ENST00000539303 ARSDP51689 593 aa5.21□□□□□ -1.58
SNHG1-210ENST00000539303 ENOX2Q16206 610 aaKnown RBP5.21□□□□□ -1.58
SNHG1-210ENST00000539303 PI16Q6UXB8 463 aa5.21□□□□□ -1.58
SNHG1-210ENST00000539303 CEP63Q96MT8 703 aa5.21□□□□□ -1.58
SNHG1-210ENST00000539303 CSRNP1Q96S65 589 aa5.21□□□□□ -1.58
SNHG1-210ENST00000539303 NEUROD4Q9HD90 331 aa5.21□□□□□ -1.58
SNHG1-210ENST00000539303 CUEDC1Q9NWM3 386 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-210ENST00000539303 TMEM63CQ9P1W3 806 aa5.21□□□□□ -1.58
SNHG1-210ENST00000539303 PARP2Q9UGN5 583 aa5.21□□□□□ -1.58
SNHG1-210ENST00000539303 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-210ENST00000539303 EIF1AYO14602 144 aaKnown RBP5.2□□□□□ -1.58
SNHG1-210ENST00000539303 MAN1A2O60476 641 aa5.2□□□□□ -1.58
SNHG1-210ENST00000539303 F11P03951 625 aa5.2□□□□□ -1.58
SNHG1-210ENST00000539303 IRS1P35568 1242 aa5.2□□□□□ -1.58
SNHG1-210ENST00000539303 USP5P45974 858 aa5.2□□□□□ -1.58
SNHG1-210ENST00000539303 MRPL58Q14197 206 aaKnown RBP5.2□□□□□ -1.58
SNHG1-210ENST00000539303 TSNAXIP1Q2TAA8 658 aa5.2□□□□□ -1.58
SNHG1-210ENST00000539303 LDLRAD1Q5T700 205 aa5.2□□□□□ -1.58
SNHG1-210ENST00000539303 PIK3R5Q8WYR1 880 aa5.2□□□□□ -1.58
SNHG1-210ENST00000539303 CRISPLD1Q9H336 500 aa5.2□□□□□ -1.58
SNHG1-210ENST00000539303 DYRK1BQ9Y463 629 aa5.2□□□□□ -1.58
SNHG1-210ENST00000539303 GPC6Q9Y625 555 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-210ENST00000539303 DCDC2BA2VCK2 349 aa5.19□□□□□ -1.58
SNHG1-210ENST00000539303 PRPF40AO75400 957 aaKnown RBP5.19□□□□□ -1.58
SNHG1-210ENST00000539303 TNFRSF21O75509 655 aa5.19□□□□□ -1.58
SNHG1-210ENST00000539303 POLR3DP05423 398 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-210ENST00000539303 PTSQ03393 145 aa5.19□□□□□ -1.58
SNHG1-210ENST00000539303 SFSWAPQ12872 951 aaKnown RBP5.19□□□□□ -1.58
SNHG1-210ENST00000539303 HIF1AQ16665 826 aa5.19□□□□□ -1.58
SNHG1-210ENST00000539303 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.19□□□□□ -1.58
SNHG1-210ENST00000539303 RIPOR1Q6ZS17 1223 aa5.19□□□□□ -1.58
SNHG1-210ENST00000539303 BACH2Q9BYV9 841 aa5.19□□□□□ -1.58
SNHG1-210ENST00000539303 BRD7Q9NPI1 651 aa5.19□□□□□ -1.58
SNHG1-210ENST00000539303 STRN4Q9NRL3 753 aa5.19□□□□□ -1.58
SNHG1-210ENST00000539303 ANKIB1Q9P2G1 1089 aa5.19□□□□□ -1.58
SNHG1-210ENST00000539303 GJA3Q9Y6H8 435 aa5.19□□□□□ -1.58
SNHG1-210ENST00000539303 SLC35F4A4IF30 521 aa5.18□□□□□ -1.58
SNHG1-210ENST00000539303 UBAP1LF5GYI3 381 aa5.18□□□□□ -1.58
SNHG1-210ENST00000539303 TCF3P15923 654 aa5.18□□□□□ -1.58
SNHG1-210ENST00000539303 PCSK2P16519 638 aa5.18□□□□□ -1.58
SNHG1-210ENST00000539303 UBAP2LQ14157 1087 aaKnown RBP5.18□□□□□ -1.58
SNHG1-210ENST00000539303 KRT25Q7Z3Z0 450 aa5.18□□□□□ -1.58
SNHG1-210ENST00000539303 ZNF438Q7Z4V0 828 aa5.18□□□□□ -1.58
SNHG1-210ENST00000539303 PGBD3Q8N328 593 aa5.18□□□□□ -1.58
SNHG1-210ENST00000539303 CHRDQ9H2X0 955 aa5.18□□□□□ -1.58
SNHG1-210ENST00000539303 FAM13BQ9NYF5 915 aa5.18□□□□□ -1.58
SNHG1-210ENST00000539303 CNTN3Q9P232 1028 aa5.18□□□□□ -1.58
SNHG1-210ENST00000539303 XYLBO75191 536 aa5.17□□□□□ -1.58
SNHG1-210ENST00000539303 CYP2E1P05181 493 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-210ENST00000539303 VAMP1P23763 118 aa5.17□□□□□ -1.58
SNHG1-210ENST00000539303 DAB2P98082 770 aa5.17□□□□□ -1.58
SNHG1-210ENST00000539303 ATP2B2Q01814 1243 aa5.17□□□□□ -1.58
SNHG1-210ENST00000539303 XPCQ01831 940 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-210ENST00000539303 DBN1Q16643 649 aa5.17□□□□□ -1.58
SNHG1-210ENST00000539303 RAB44Q7Z6P3 723 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-210ENST00000539303 C1orf127Q8N9H9 656 aa5.17□□□□□ -1.58
SNHG1-210ENST00000539303 TTC16Q8NEE8 873 aa5.17□□□□□ -1.58
SNHG1-210ENST00000539303 EPS8L3Q8TE67 593 aaKnown RBP5.17□□□□□ -1.58
SNHG1-210ENST00000539303 IRX2Q9BZI1 471 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-210ENST00000539303 ELP3Q9H9T3 547 aa5.17□□□□□ -1.58
SNHG1-210ENST00000539303 GMPR2Q9P2T1 348 aaKnown RBP5.17□□□□□ -1.58
SNHG1-210ENST00000539303 LCE2BO14633 110 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 EREGO14944 169 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 KHNYNO15037 678 aaKnown RBP5.16□□□□□ -1.58
SNHG1-210ENST00000539303 ATXN7O15265 892 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-210ENST00000539303 EFSO43281 561 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 IGSF3O75054 1194 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 CPNE3O75131 537 aaKnown RBP5.16□□□□□ -1.58
SNHG1-210ENST00000539303 SASH3O75995 380 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 SNRPBP14678 240 aaKnown RBP5.16□□□□□ -1.58
SNHG1-210ENST00000539303 TARSP26639 723 aaKnown RBP5.16□□□□□ -1.58
SNHG1-210ENST00000539303 PSMD2Q13200 908 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.16□□□□□ -1.584e-12■□□□□ 10.4
SNHG1-210ENST00000539303 SAMD5Q5TGI4 173 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 C9orf131Q5VYM1 1079 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 TMC4Q7Z404 712 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 NLRP8Q86W28 1048 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 CCDC155Q8N6L0 562 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 ZFYVE28Q9HCC9 887 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 NPHS2Q9NP85 383 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 KANSL3Q9P2N6 904 aa5.16□□□□□ -1.58
SNHG1-210ENST00000539303 BNIP3LO60238 219 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 PHACTR2O75167 634 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 CTSHP09668 335 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 EFHC2Q5JST6 749 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms