RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 NBPF14Q5TI25 921 aa21.62■■□□□ 1.05
GNE-204ENST00000539208 NBPF10Q6P3W6 841 aaKnown RBP21.62■■□□□ 1.05
GNE-204ENST00000539208 UBE3BQ7Z3V4 1068 aa21.62■■□□□ 1.05
GNE-204ENST00000539208 NBPF15Q8N660 670 aa21.62■■□□□ 1.05
GNE-204ENST00000539208 TM6SF1Q9BZW5 370 aa21.62■■□□□ 1.05
GNE-204ENST00000539208 A0A087WZG4 1122 aa21.61■■□□□ 1.05
GNE-204ENST00000539208 KLHDC4Q8TBB5 520 aa21.61■■□□□ 1.05
GNE-204ENST00000539208 TLR7Q9NYK1 1049 aaKnown RBP21.61■■□□□ 1.05
GNE-204ENST00000539208 PTH1RQ03431 593 aa21.61■■□□□ 1.05
GNE-204ENST00000539208 SHANK3Q9BYB0 1731 aa21.6■■□□□ 1.05
GNE-204ENST00000539208 TNS2Q63HR2 1409 aa21.6■■□□□ 1.05
GNE-204ENST00000539208 CCDC171Q6TFL3 1326 aa21.6■■□□□ 1.05
GNE-204ENST00000539208 H7C1W4 665 aa21.6■■□□□ 1.05
GNE-204ENST00000539208 NECTIN1Q15223 517 aa21.6■■□□□ 1.05
GNE-204ENST00000539208 GAS2L3Q86XJ1 694 aa21.6■■□□□ 1.05
GNE-204ENST00000539208 ZNF335Q9H4Z2 1342 aaPredicted RBP21.59■■□□□ 1.05
GNE-204ENST00000539208 NUP188Q5SRE5 1749 aa21.59■■□□□ 1.05
GNE-204ENST00000539208 ATP5J2-PTCD1G3V325 749 aa21.59■■□□□ 1.05
GNE-204ENST00000539208 PTCD1O75127 700 aaKnown RBP21.59■■□□□ 1.05
GNE-204ENST00000539208 NOL8Q76FK4 1167 aaKnown RBP21.59■■□□□ 1.05
GNE-204ENST00000539208 LIMCH1Q9UPQ0 1083 aa21.59■■□□□ 1.05
GNE-204ENST00000539208 ATP5JP18859 108 aa21.58■■□□□ 1.05
GNE-204ENST00000539208 MAP4K1Q92918 833 aa21.58■■□□□ 1.05
GNE-204ENST00000539208 AK2P54819 239 aa21.58■■□□□ 1.04
GNE-204ENST00000539208 TNNI3KQ59H18 835 aa21.58■■□□□ 1.04
GNE-204ENST00000539208 FAM43AQ8N2R8 423 aa21.58■■□□□ 1.04
GNE-204ENST00000539208 ARXQ96QS3 562 aa21.58■■□□□ 1.04
GNE-204ENST00000539208 FPGT-TNNI3KV9GXZ4 949 aa21.58■■□□□ 1.04
GNE-204ENST00000539208 NMIQ13287 307 aaPredicted RBP21.57■■□□□ 1.04
GNE-204ENST00000539208 PANK2Q9BZ23 570 aa21.57■■□□□ 1.04
GNE-204ENST00000539208 BOLA2Q9H3K6 86 aa21.57■■□□□ 1.04
GNE-204ENST00000539208 ZSWIM6Q9HCJ5 1215 aa21.57■■□□□ 1.04
GNE-204ENST00000539208 NHSL1Q5SYE7 1610 aa21.57■■□□□ 1.04
GNE-204ENST00000539208 PRPF40AO75400 957 aaKnown RBP21.57■■□□□ 1.04
GNE-204ENST00000539208 ZNF445P59923 1031 aa21.57■■□□□ 1.04
GNE-204ENST00000539208 VPS53Q5VIR6 699 aa21.57■■□□□ 1.04
GNE-204ENST00000539208 JARID2Q92833 1246 aaPredicted RBP21.57■■□□□ 1.04
GNE-204ENST00000539208 CASTP20810 708 aaKnown RBP21.56■■□□□ 1.04
GNE-204ENST00000539208 TFCP2Q12800 502 aa21.56■■□□□ 1.04
GNE-204ENST00000539208 PRPF40BQ6NWY9 871 aaKnown RBP21.56■■□□□ 1.04
GNE-204ENST00000539208 RUFY3Q7L099 469 aa21.56■■□□□ 1.04
GNE-204ENST00000539208 FAM227BQ96M60 508 aa21.56■■□□□ 1.04
GNE-204ENST00000539208 FOXO4P98177 505 aa21.55■■□□□ 1.04
GNE-204ENST00000539208 FSD1Q9BTV5 496 aa21.55■■□□□ 1.04
GNE-204ENST00000539208 CWC25Q9NXE8 425 aaPredicted RBP21.55■■□□□ 1.04
GNE-204ENST00000539208 WDR33Q9C0J8 1336 aaKnown RBP21.55■■□□□ 1.04
GNE-204ENST00000539208 RFX7Q2KHR2 1363 aa21.55■■□□□ 1.04
GNE-204ENST00000539208 ZKSCAN1P17029 563 aaPredicted RBP21.55■■□□□ 1.04
GNE-204ENST00000539208 TTLL7Q6ZT98 887 aa21.55■■□□□ 1.04
GNE-204ENST00000539208 DBNLQ9UJU6 430 aaKnown RBP21.55■■□□□ 1.04
GNE-204ENST00000539208 MED23Q9ULK4 1368 aa21.55■■□□□ 1.04
GNE-204ENST00000539208 EVA1CP58658 441 aa21.54■■□□□ 1.04
GNE-204ENST00000539208 CCDC191Q8NCU4 936 aa21.54■■□□□ 1.04
GNE-204ENST00000539208 DDX54Q8TDD1 881 aaKnown RBP21.54■■□□□ 1.04
GNE-204ENST00000539208 RTN4Q9NQC3 1192 aaKnown RBP21.54■■□□□ 1.04
GNE-204ENST00000539208 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.54■■□□□ 1.04
GNE-204ENST00000539208 RBM8AQ9Y5S9 174 aaKnown RBP21.54■■□□□ 1.04
GNE-204ENST00000539208 CYP46A1Q9Y6A2 500 aa21.54■■□□□ 1.04
GNE-204ENST00000539208 JCADQ9P266 1359 aa21.54■■□□□ 1.04
GNE-204ENST00000539208 A1BGP04217 495 aa21.54■■□□□ 1.04
GNE-204ENST00000539208 LMBR1LQ6UX01 489 aa21.54■■□□□ 1.04
GNE-204ENST00000539208 ZSCAN31Q96LW9 406 aaPredicted RBP21.54■■□□□ 1.04
GNE-204ENST00000539208 CREB3L3Q68CJ9 461 aa21.53■■□□□ 1.04
GNE-204ENST00000539208 JAKMIP1Q96N16 626 aaKnown RBP21.53■■□□□ 1.04
GNE-204ENST00000539208 PDRG1Q9NUG6 133 aa21.53■■□□□ 1.04
GNE-204ENST00000539208 TJP1Q07157 1748 aa21.53■■□□□ 1.04
GNE-204ENST00000539208 A0A0D9SFI3 127 aa21.53■■□□□ 1.04
GNE-204ENST00000539208 ADCK5Q3MIX3 580 aa21.53■■□□□ 1.04
GNE-204ENST00000539208 GPT2Q8TD30 523 aa21.53■■□□□ 1.04
GNE-204ENST00000539208 SH2B1Q9NRF2 756 aaPredicted RBP21.52■■□□□ 1.04
GNE-204ENST00000539208 STRN4Q9NRL3 753 aa21.52■■□□□ 1.04
GNE-204ENST00000539208 KDM4FA0A1W2PPD8 638 aa21.51■■□□□ 1.03
GNE-204ENST00000539208 MBD3O95983 291 aa21.51■■□□□ 1.03
GNE-204ENST00000539208 CAVIN1Q6NZI2 390 aaKnown RBP21.51■■□□□ 1.03
GNE-204ENST00000539208 GPR108Q9NPR9 543 aa21.51■■□□□ 1.03
GNE-204ENST00000539208 RPAP1Q9BWH6 1393 aaPredicted RBP21.51■■□□□ 1.03
GNE-204ENST00000539208 NCLP19338 710 aaKnown RBP21.51■■□□□ 1.03
GNE-204ENST00000539208 PSMA5P28066 241 aa21.51■■□□□ 1.03
GNE-204ENST00000539208 ZSCAN23Q3MJ62 389 aa21.51■■□□□ 1.03
GNE-204ENST00000539208 RNF20Q5VTR2 975 aa21.51■■□□□ 1.03
GNE-204ENST00000539208 TICAM2Q86XR7 235 aa21.51■■□□□ 1.03
GNE-204ENST00000539208 TOGARAM1Q9Y4F4 1720 aa21.5■■□□□ 1.03
GNE-204ENST00000539208 SLC27A2O14975 620 aa21.5■■□□□ 1.03
GNE-204ENST00000539208 TSGA10IPQ3SY00 556 aa21.5■■□□□ 1.03
GNE-204ENST00000539208 FOXD4L5Q5VV16 416 aaPredicted RBP21.5■■□□□ 1.03
GNE-204ENST00000539208 FOXD4L4Q8WXT5 416 aaPredicted RBP21.5■■□□□ 1.03
GNE-204ENST00000539208 HAUS7Q99871 368 aa21.5■■□□□ 1.03
GNE-204ENST00000539208 ATG3Q9NT62 314 aa21.5■■□□□ 1.03
GNE-204ENST00000539208 KCNJ4P48050 445 aa21.5■■□□□ 1.03
GNE-204ENST00000539208 TEX13AQ9BXU3 409 aaPredicted RBP21.5■■□□□ 1.03
GNE-204ENST00000539208 ALDH8A1Q9H2A2 487 aaPredicted RBP21.5■■□□□ 1.03
GNE-204ENST00000539208 VSIG10Q8N0Z9 540 aa21.49■■□□□ 1.03
GNE-204ENST00000539208 TMOD3Q9NYL9 352 aa21.49■■□□□ 1.03
GNE-204ENST00000539208 HMG20BQ9P0W2 317 aa21.49■■□□□ 1.03
GNE-204ENST00000539208 CPA1P15085 419 aa21.48■■□□□ 1.03
GNE-204ENST00000539208 ATG9AQ7Z3C6 839 aa21.48■■□□□ 1.03
GNE-204ENST00000539208 DBNDD2Q9BQY9 259 aa21.48■■□□□ 1.03
GNE-204ENST00000539208 USPL1Q5W0Q7 1092 aa21.48■■□□□ 1.03
GNE-204ENST00000539208 IL15P40933 162 aaPredicted RBP21.47■■□□□ 1.03
GNE-204ENST00000539208 CHAMP1Q96JM3 812 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms