RNA–Protein interactions for RNA: ENST00000536666.1

LINC02398-201, Transcript of long intergenic non-protein coding RNA 2398, humanhuman

TSL 3 BASIC

Gene LINC02398, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02398-201ENST00000536666 NID1P14543 1247 aa8.44□□□□□ -1.06
LINC02398-201ENST00000536666 SEC13P55735 322 aa8.44□□□□□ -1.06
LINC02398-201ENST00000536666 COL9A3Q14050 684 aaPredicted RBP8.44□□□□□ -1.06
LINC02398-201ENST00000536666 GRIK4Q16099 956 aa8.44□□□□□ -1.06
LINC02398-201ENST00000536666 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
LINC02398-201ENST00000536666 HINFPQ9BQA5 517 aa8.44□□□□□ -1.06
LINC02398-201ENST00000536666 EFCC1Q9HA90 598 aa8.44□□□□□ -1.06
LINC02398-201ENST00000536666 TPSG1Q9NRR2 321 aa8.44□□□□□ -1.06
LINC02398-201ENST00000536666 C9orf172C9J069 976 aa8.43□□□□□ -1.06
LINC02398-201ENST00000536666 C21orf2O43822 256 aa8.43□□□□□ -1.06
LINC02398-201ENST00000536666 RSPO4Q2I0M5 234 aaPredicted RBP8.43□□□□□ -1.06
LINC02398-201ENST00000536666 LARP1Q6PKG0 1096 aaKnown RBP8.43□□□□□ -1.06
LINC02398-201ENST00000536666 C2orf49Q9BVC5 232 aaPredicted RBP8.43□□□□□ -1.06
LINC02398-201ENST00000536666 JPH1Q9HDC5 661 aaPredicted RBP8.43□□□□□ -1.06
LINC02398-201ENST00000536666 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
LINC02398-201ENST00000536666 ITGB7P26010 798 aa8.42□□□□□ -1.06
LINC02398-201ENST00000536666 RAC1P63000 192 aa8.42□□□□□ -1.06
LINC02398-201ENST00000536666 C20orf204Q6ZNR8 217 aa8.42□□□□□ -1.06
LINC02398-201ENST00000536666 SLC6A14Q9UN76 642 aa8.42□□□□□ -1.06
LINC02398-201ENST00000536666 NKAPLQ5M9Q1 402 aa8.41□□□□□ -1.06
LINC02398-201ENST00000536666 GLMNQ92990 594 aa8.41□□□□□ -1.06
LINC02398-201ENST00000536666 TFIP11Q9UBB9 837 aaKnown RBP8.41□□□□□ -1.06
LINC02398-201ENST00000536666 DYRK3O43781 588 aa8.4□□□□□ -1.06
LINC02398-201ENST00000536666 ELNP15502 786 aa8.4□□□□□ -1.06
LINC02398-201ENST00000536666 EPB42P16452 691 aa8.4□□□□□ -1.06
LINC02398-201ENST00000536666 RTN1Q16799 776 aa8.4□□□□□ -1.06
LINC02398-201ENST00000536666 NUDT8Q8WV74 236 aa8.4□□□□□ -1.06
LINC02398-201ENST00000536666 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.4□□□□□ -1.06
LINC02398-201ENST00000536666 A0A0A0MRY4 1105 aa8.39□□□□□ -1.07
LINC02398-201ENST00000536666 DKK1O94907 266 aa8.39□□□□□ -1.07
LINC02398-201ENST00000536666 NRG1Q02297 640 aaPredicted RBP8.39□□□□□ -1.07
LINC02398-201ENST00000536666 CCINQ13939 588 aa8.39□□□□□ -1.07
LINC02398-201ENST00000536666 IER5Q5VY09 327 aa8.39□□□□□ -1.07
LINC02398-201ENST00000536666 DNAJB12Q9NXW2 375 aaKnown RBP8.39□□□□□ -1.07
LINC02398-201ENST00000536666 MAFBQ9Y5Q3 323 aaPredicted RBP8.39□□□□□ -1.07
LINC02398-201ENST00000536666 RGS9O75916 674 aaPredicted RBP8.38□□□□□ -1.07
LINC02398-201ENST00000536666 PCSK7Q16549 785 aa8.38□□□□□ -1.07
LINC02398-201ENST00000536666 PSAPL1Q6NUJ1 521 aa8.38□□□□□ -1.07
LINC02398-201ENST00000536666 GSX2Q9BZM3 304 aa8.38□□□□□ -1.07
LINC02398-201ENST00000536666 TGFBR3LH3BV60 316 aa8.37□□□□□ -1.07
LINC02398-201ENST00000536666 NFKB1P19838 968 aa8.37□□□□□ -1.07
LINC02398-201ENST00000536666 PROSER2Q86WR7 435 aaPredicted RBP8.37□□□□□ -1.07
LINC02398-201ENST00000536666 DPYDQ12882 1025 aa8.36□□□□□ -1.07
LINC02398-201ENST00000536666 CLUAP1Q96AJ1 413 aa8.36□□□□□ -1.07
LINC02398-201ENST00000536666 CALR3Q96L12 384 aaKnown RBP8.36□□□□□ -1.07
LINC02398-201ENST00000536666 USP21Q9UK80 565 aa8.36□□□□□ -1.07
LINC02398-201ENST00000536666 SELPP16109 830 aa8.35□□□□□ -1.07
LINC02398-201ENST00000536666 AFF1P51825 1210 aaKnown RBP8.35□□□□□ -1.07
LINC02398-201ENST00000536666 ADGRE1Q14246 886 aa8.35□□□□□ -1.07
LINC02398-201ENST00000536666 MBTPS1Q14703 1052 aa8.35□□□□□ -1.07
LINC02398-201ENST00000536666 PRSS36Q5K4E3 855 aa8.35□□□□□ -1.07
LINC02398-201ENST00000536666 FAM35AQ86V20 835 aa8.35□□□□□ -1.07
LINC02398-201ENST00000536666 TXNRD3Q86VQ6 643 aa8.35□□□□□ -1.07
LINC02398-201ENST00000536666 DMRTC2Q8IXT2 367 aaPredicted RBP8.35□□□□□ -1.07
LINC02398-201ENST00000536666 LENG1Q96BZ8 264 aaPredicted RBP8.35□□□□□ -1.07
LINC02398-201ENST00000536666 LGR5O75473 907 aa8.34□□□□□ -1.07
LINC02398-201ENST00000536666 IGFBP4P22692 258 aa8.34□□□□□ -1.07
LINC02398-201ENST00000536666 VTI1AQ96AJ9 217 aa8.34□□□□□ -1.07
LINC02398-201ENST00000536666 H2AFB1P0C5Y9 115 aa8.33□□□□□ -1.08
LINC02398-201ENST00000536666 H2AFB2P0C5Z0 115 aa8.33□□□□□ -1.08
LINC02398-201ENST00000536666 ARID4AP29374 1257 aaPredicted RBP8.33□□□□□ -1.08
LINC02398-201ENST00000536666 PTK7Q13308 1070 aa8.33□□□□□ -1.08
LINC02398-201ENST00000536666 CRTC2Q53ET0 693 aaPredicted RBP8.33□□□□□ -1.08
LINC02398-201ENST00000536666 ANKMY2Q8IV38 441 aa8.33□□□□□ -1.08
LINC02398-201ENST00000536666 PPP1R12CQ9BZL4 782 aa8.33□□□□□ -1.08
LINC02398-201ENST00000536666 VRTNQ9H8Y1 702 aa8.33□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L15C9J2P7 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L10C9JJH3 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L13C9JLJ4 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L12C9JPN9 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L11C9JVI0 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L21D6R901 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L18D6R9N7 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L22D6RA61 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L17D6RBQ6 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L19D6RCP7 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L20D6RJB6 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 CPB1P15086 417 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 IDH3AP50213 366 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 USP17L24Q0WX57 530 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 SHISA2Q6UWI4 295 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 KRT25Q7Z3Z0 450 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 FMR1NBQ8N0W7 255 aaPredicted RBP8.32□□□□□ -1.08
LINC02398-201ENST00000536666 TP53INP1Q96A56 240 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 ZFP64Q9NPA5 681 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 KLK14Q9P0G3 267 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 NAGPAQ9UK23 515 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 BCS1LQ9Y276 419 aa8.32□□□□□ -1.08
LINC02398-201ENST00000536666 FAM196BA6NMK8 535 aa8.31□□□□□ -1.08
LINC02398-201ENST00000536666 MAP3K6O95382 1288 aa8.31□□□□□ -1.08
LINC02398-201ENST00000536666 LMOD1P29536 600 aaPredicted RBP8.31□□□□□ -1.08
LINC02398-201ENST00000536666 ARSDP51689 593 aa8.31□□□□□ -1.08
LINC02398-201ENST00000536666 MSL1Q68DK7 614 aa8.31□□□□□ -1.08
LINC02398-201ENST00000536666 ELMSAN1Q6PJG2 1045 aa8.31□□□□□ -1.08
LINC02398-201ENST00000536666 NBPF11Q86T75 865 aa8.31□□□□□ -1.08
LINC02398-201ENST00000536666 FNBP4Q8N3X1 1017 aaPredicted RBP8.31□□□□□ -1.08
LINC02398-201ENST00000536666 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.31□□□□□ -1.08
LINC02398-201ENST00000536666 DMGDHQ9UI17 866 aaKnown RBP8.31□□□□□ -1.08
LINC02398-201ENST00000536666 RARAP10276 462 aa8.3□□□□□ -1.08
LINC02398-201ENST00000536666 INPP5BP32019 993 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms