RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 DIAPH3Q9NSV4 1193 aa21.47■■□□□ 1.03
RAB40C-203ENST00000535977 NEXNQ0ZGT2 675 aa21.47■■□□□ 1.03
RAB40C-203ENST00000535977 EVI5LQ96CN4 794 aa21.47■■□□□ 1.03
RAB40C-203ENST00000535977 KIF3AQ9Y496 699 aa21.47■■□□□ 1.03
RAB40C-203ENST00000535977 DCCP43146 1447 aa21.46■■□□□ 1.03
RAB40C-203ENST00000535977 NPHP3Q7Z494 1330 aa21.46■■□□□ 1.03
RAB40C-203ENST00000535977 ATF3P18847 181 aa21.46■■□□□ 1.03
RAB40C-203ENST00000535977 MAP4K4O95819 1239 aaPredicted RBP21.46■■□□□ 1.03
RAB40C-203ENST00000535977 G3BP1Q13283 466 aaKnown RBP eCLIP21.46■■□□□ 1.03
RAB40C-203ENST00000535977 BCL2L12Q9HB09 334 aa21.45■■□□□ 1.02
RAB40C-203ENST00000535977 SNX14Q9Y5W7 946 aa21.45■■□□□ 1.02
RAB40C-203ENST00000535977 PDIA6Q15084 440 aa21.45■■□□□ 1.02
RAB40C-203ENST00000535977 IL25Q9H293 177 aa21.45■■□□□ 1.02
RAB40C-203ENST00000535977 NSFL1CQ9UNZ2 370 aaKnown RBP21.45■■□□□ 1.02
RAB40C-203ENST00000535977 WDR33Q9C0J8 1336 aaKnown RBP21.44■■□□□ 1.02
RAB40C-203ENST00000535977 CWF19L2Q2TBE0 894 aaKnown RBP21.44■■□□□ 1.02
RAB40C-203ENST00000535977 TAF3Q5VWG9 929 aa21.44■■□□□ 1.02
RAB40C-203ENST00000535977 RIC3Q7Z5B4 369 aa21.44■■□□□ 1.02
RAB40C-203ENST00000535977 IFNL2Q8IZJ0 200 aa21.44■■□□□ 1.02
RAB40C-203ENST00000535977 MPNDQ8N594 471 aa21.44■■□□□ 1.02
RAB40C-203ENST00000535977 UPF3BQ9BZI7 483 aaKnown RBP21.44■■□□□ 1.02
RAB40C-203ENST00000535977 CGNQ9P2M7 1197 aaKnown RBP21.44■■□□□ 1.02
RAB40C-203ENST00000535977 SCN11AQ9UI33 1791 aa21.44■■□□□ 1.02
RAB40C-203ENST00000535977 PHKG2P15735 406 aa21.44■■□□□ 1.02
RAB40C-203ENST00000535977 ZC3H6P61129 1189 aaKnown RBP21.44■■□□□ 1.02
RAB40C-203ENST00000535977 NLRP2Q9NX02 1062 aa21.44■■□□□ 1.02
RAB40C-203ENST00000535977 RGPD5Q99666 1765 aa21.44■■□□□ 1.02
RAB40C-203ENST00000535977 ZBTB22O15209 634 aa21.43■■□□□ 1.02
RAB40C-203ENST00000535977 NOLC1Q14978 699 aaKnown RBP eCLIP21.43■■□□□ 1.02
RAB40C-203ENST00000535977 PDCL2Q8N4E4 241 aa21.43■■□□□ 1.02
RAB40C-203ENST00000535977 PIBF1Q8WXW3 757 aa21.43■■□□□ 1.02
RAB40C-203ENST00000535977 CWC27Q6UX04 472 aaKnown RBP21.43■■□□□ 1.02
RAB40C-203ENST00000535977 SUCLG2Q96I99 432 aa21.43■■□□□ 1.02
RAB40C-203ENST00000535977 ZNF830Q96NB3 372 aaPredicted RBP21.43■■□□□ 1.02
RAB40C-203ENST00000535977 CHAMP1Q96JM3 812 aa21.42■■□□□ 1.02
RAB40C-203ENST00000535977 TTC14Q96N46 770 aa21.42■■□□□ 1.02
RAB40C-203ENST00000535977 TM6SF1Q9BZW5 370 aa21.42■■□□□ 1.02
RAB40C-203ENST00000535977 LIMCH1Q9UPQ0 1083 aa21.42■■□□□ 1.02
RAB40C-203ENST00000535977 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.42■■□□□ 1.02
RAB40C-203ENST00000535977 PRAMEF22A3QJZ6 481 aa21.42■■□□□ 1.02
RAB40C-203ENST00000535977 AACSQ86V21 672 aa21.42■■□□□ 1.02
RAB40C-203ENST00000535977 C17orf53Q8N3J3 647 aaPredicted RBP21.42■■□□□ 1.02
RAB40C-203ENST00000535977 KCNB2Q92953 911 aa21.42■■□□□ 1.02
RAB40C-203ENST00000535977 DCAF5Q96JK2 942 aa21.41■■□□□ 1.02
RAB40C-203ENST00000535977 BICC1Q9H694 974 aaKnown RBP21.41■■□□□ 1.02
RAB40C-203ENST00000535977 U2AF2P26368 475 aaKnown RBP eCLIP21.41■■□□□ 1.02
RAB40C-203ENST00000535977 AIMP1Q12904 312 aaKnown RBP21.41■■□□□ 1.02
RAB40C-203ENST00000535977 METTL22Q9BUU2 404 aaPredicted RBP21.41■■□□□ 1.02
RAB40C-203ENST00000535977 KDM6AO15550 1401 aaPredicted RBP21.4■■□□□ 1.02
RAB40C-203ENST00000535977 SNRPA1P09661 255 aaKnown RBP21.4■■□□□ 1.02
RAB40C-203ENST00000535977 KAZALD1Q96I82 304 aa21.4■■□□□ 1.02
RAB40C-203ENST00000535977 PA2G4Q9UQ80 394 aaKnown RBP21.4■■□□□ 1.02
RAB40C-203ENST00000535977 SYAP1Q96A49 352 aaPredicted RBP21.39■■□□□ 1.02
RAB40C-203ENST00000535977 ZSCAN31Q96LW9 406 aaPredicted RBP21.39■■□□□ 1.02
RAB40C-203ENST00000535977 NEURL1BA8MQ27 555 aa21.39■■□□□ 1.01
RAB40C-203ENST00000535977 IGKV5-2P06315 115 aa21.39■■□□□ 1.01
RAB40C-203ENST00000535977 NFATC2IPQ8NCF5 419 aa21.39■■□□□ 1.01
RAB40C-203ENST00000535977 GCKRQ14397 625 aa21.38■■□□□ 1.01
RAB40C-203ENST00000535977 NOL8Q76FK4 1167 aaKnown RBP21.38■■□□□ 1.01
RAB40C-203ENST00000535977 ZNF771Q7L3S4 317 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-203ENST00000535977 TTC5Q8N0Z6 440 aa21.38■■□□□ 1.01
RAB40C-203ENST00000535977 MRC1P22897 1456 aa21.38■■□□□ 1.01
RAB40C-203ENST00000535977 VPS53Q5VIR6 699 aa21.38■■□□□ 1.01
RAB40C-203ENST00000535977 SNRKQ9NRH2 765 aa21.38■■□□□ 1.01
RAB40C-203ENST00000535977 COL15A1P39059 1388 aa21.38■■□□□ 1.01
RAB40C-203ENST00000535977 SASH1O94885 1247 aa21.37■■□□□ 1.01
RAB40C-203ENST00000535977 CADPS2Q86UW7 1296 aa21.37■■□□□ 1.01
RAB40C-203ENST00000535977 COL18A1P39060 1754 aa21.37■■□□□ 1.01
RAB40C-203ENST00000535977 CSB-PGBD3P0DP91 1061 aa21.37■■□□□ 1.01
RAB40C-203ENST00000535977 ZKSCAN1P17029 563 aaPredicted RBP21.37■■□□□ 1.01
RAB40C-203ENST00000535977 SLC39A6Q13433 755 aa21.37■■□□□ 1.01
RAB40C-203ENST00000535977 RASEFQ8IZ41 740 aa21.37■■□□□ 1.01
RAB40C-203ENST00000535977 XAGE3Q8WTP9 111 aa21.37■■□□□ 1.01
RAB40C-203ENST00000535977 FMNL2Q96PY5 1086 aa21.37■■□□□ 1.01
RAB40C-203ENST00000535977 SH2B1Q9NRF2 756 aaPredicted RBP21.37■■□□□ 1.01
RAB40C-203ENST00000535977 AK2P54819 239 aa21.36■■□□□ 1.01
RAB40C-203ENST00000535977 ANKRD13DQ6ZTN6 518 aa21.36■■□□□ 1.01
RAB40C-203ENST00000535977 TSPY26PQ9H489 355 aa21.36■■□□□ 1.01
RAB40C-203ENST00000535977 COPS6Q7L5N1 327 aa21.36■■□□□ 1.01
RAB40C-203ENST00000535977 TTC12Q9H892 705 aaPredicted RBP21.35■■□□□ 1.01
RAB40C-203ENST00000535977 ATP6V1DQ9Y5K8 247 aa21.35■■□□□ 1.01
RAB40C-203ENST00000535977 TMEM94Q12767 1356 aa21.35■■□□□ 1.01
RAB40C-203ENST00000535977 PLCD3Q8N3E9 789 aa21.35■■□□□ 1.01
RAB40C-203ENST00000535977 EAF2Q96CJ1 260 aaPredicted RBP21.35■■□□□ 1.01
RAB40C-203ENST00000535977 ZSWIM6Q9HCJ5 1215 aa21.35■■□□□ 1.01
RAB40C-203ENST00000535977 CYP46A1Q9Y6A2 500 aa21.35■■□□□ 1.01
RAB40C-203ENST00000535977 TNS3Q68CZ2 1445 aa21.35■■□□□ 1.01
RAB40C-203ENST00000535977 CASTP20810 708 aaKnown RBP21.35■■□□□ 1.01
RAB40C-203ENST00000535977 ZNF496Q96IT1 587 aaPredicted RBP21.35■■□□□ 1.01
RAB40C-203ENST00000535977 CCDC171Q6TFL3 1326 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 NECTIN1Q15223 517 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 FOXD4L5Q5VV16 416 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-203ENST00000535977 KLHL34Q8N239 644 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 FOXD4L4Q8WXT5 416 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-203ENST00000535977 COPRSQ9NQ92 184 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 MEGF6O75095 1541 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 CPDO75976 1380 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 C5P01031 1676 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 PHF14O94880 888 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 MYL6BP14649 208 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms