RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 NUP98P52948 1817 aa11.53□□□□□ -0.56
CHD4-204ENST00000535810 HOXB7P09629 217 aa11.52□□□□□ -0.57
CHD4-204ENST00000535810 ZNF853P0CG23 659 aa11.52□□□□□ -0.57
CHD4-204ENST00000535810 C9orf131Q5VYM1 1079 aa11.52□□□□□ -0.57
CHD4-204ENST00000535810 TPTE2Q6XPS3 522 aa11.52□□□□□ -0.57
CHD4-204ENST00000535810 C16orf71Q8IYS4 520 aaPredicted RBP11.52□□□□□ -0.57
CHD4-204ENST00000535810 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
CHD4-204ENST00000535810 ZNF622Q969S3 477 aaKnown RBP eCLIP11.52□□□□□ -0.578e-16■■■□□ 16.7
CHD4-204ENST00000535810 MRS2Q9HD23 443 aa11.52□□□□□ -0.57
CHD4-204ENST00000535810 IFT57Q9NWB7 429 aa11.52□□□□□ -0.57
CHD4-204ENST00000535810 UBN2Q6ZU65 1347 aa11.52□□□□□ -0.57
CHD4-204ENST00000535810 ABCC12Q96J65 1359 aa11.52□□□□□ -0.57
CHD4-204ENST00000535810 IBTKQ9P2D0 1353 aaPredicted RBP11.52□□□□□ -0.57
CHD4-204ENST00000535810 KLRG2A4D1S0 409 aaPredicted RBP11.51□□□□□ -0.57
CHD4-204ENST00000535810 FAM177BA6PVY3 158 aa11.51□□□□□ -0.57
CHD4-204ENST00000535810 RASSF7Q02833 373 aa11.51□□□□□ -0.57
CHD4-204ENST00000535810 CALD1Q05682 793 aaKnown RBP11.51□□□□□ -0.57
CHD4-204ENST00000535810 HDGFL1Q5TGJ6 251 aa11.51□□□□□ -0.57
CHD4-204ENST00000535810 STYK1Q6J9G0 422 aa11.51□□□□□ -0.57
CHD4-204ENST00000535810 TNRC6CQ9HCJ0 1690 aaKnown RBP11.51□□□□□ -0.57
CHD4-204ENST00000535810 NFKBIEO00221 500 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 GPTP24298 496 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 GNAI1P63096 354 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 PRPF40BQ6NWY9 871 aaKnown RBP11.5□□□□□ -0.57
CHD4-204ENST00000535810 GIGYF2Q6Y7W6 1299 aaKnown RBP11.5□□□□□ -0.57
CHD4-204ENST00000535810 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 ZNF34Q8IZ26 560 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 XAGE3Q8WTP9 111 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 CNKSR1Q969H4 720 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 MASTLQ96GX5 879 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 NYXQ9GZU5 481 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 DDX21Q9NR30 783 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHD4-204ENST00000535810 RNF181Q9P0P0 153 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 CHPF2Q9P2E5 772 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 SBF1O95248 1867 aa11.5□□□□□ -0.57
CHD4-204ENST00000535810 ARFGEF2Q9Y6D5 1785 aa11.49□□□□□ -0.57
CHD4-204ENST00000535810 SLX4Q8IY92 1834 aa11.49□□□□□ -0.57
CHD4-204ENST00000535810 C21orf2O43822 256 aa11.49□□□□□ -0.57
CHD4-204ENST00000535810 NPR1P16066 1061 aa11.49□□□□□ -0.57
CHD4-204ENST00000535810 SUSD4Q5VX71 490 aa11.49□□□□□ -0.57
CHD4-204ENST00000535810 COPS6Q7L5N1 327 aa11.49□□□□□ -0.57
CHD4-204ENST00000535810 RIC1Q4ADV7 1423 aa11.49□□□□□ -0.57
CHD4-204ENST00000535810 WDR90Q96KV7 1748 aa11.49□□□□□ -0.57
CHD4-204ENST00000535810 NTSR2O95665 410 aa11.48□□□□□ -0.57
CHD4-204ENST00000535810 HSPA1AP0DMV8 641 aaKnown RBP11.48□□□□□ -0.57
CHD4-204ENST00000535810 HSPA1BP0DMV9 641 aaKnown RBP11.48□□□□□ -0.57
CHD4-204ENST00000535810 LMNB1P20700 586 aa11.48□□□□□ -0.57
CHD4-204ENST00000535810 GTF2E1P29083 439 aaPredicted RBP11.48□□□□□ -0.57
CHD4-204ENST00000535810 AIMP1Q12904 312 aaKnown RBP11.48□□□□□ -0.57
CHD4-204ENST00000535810 CCDC27Q2M243 656 aa11.48□□□□□ -0.57
CHD4-204ENST00000535810 CRY2Q49AN0 593 aa11.48□□□□□ -0.57
CHD4-204ENST00000535810 ERFEQ4G0M1 354 aa11.48□□□□□ -0.57
CHD4-204ENST00000535810 PARP10Q53GL7 1025 aa11.48□□□□□ -0.57
CHD4-204ENST00000535810 DBF4Q9UBU7 674 aaPredicted RBP11.48□□□□□ -0.57
CHD4-204ENST00000535810 CACNA1SQ13698 1873 aa11.47□□□□□ -0.57
CHD4-204ENST00000535810 FER1L6Q2WGJ9 1857 aa11.47□□□□□ -0.57
CHD4-204ENST00000535810 ZC3H4Q9UPT8 1303 aaKnown RBP11.47□□□□□ -0.57
CHD4-204ENST00000535810 MNX1P50219 401 aaPredicted RBP11.47□□□□□ -0.57
CHD4-204ENST00000535810 WWC1Q8IX03 1113 aa11.47□□□□□ -0.57
CHD4-204ENST00000535810 C7orf43Q8WVR3 580 aa11.47□□□□□ -0.57
CHD4-204ENST00000535810 ANKRD36CQ5JPF3 1778 aa11.46□□□□□ -0.57
CHD4-204ENST00000535810 KDM2BQ8NHM5 1336 aa11.46□□□□□ -0.57
CHD4-204ENST00000535810 LTBP3Q9NS15 1303 aa11.46□□□□□ -0.57
CHD4-204ENST00000535810 NUBP1P53384 320 aa11.46□□□□□ -0.57
CHD4-204ENST00000535810 HSP90AB3PQ58FF7 597 aa11.46□□□□□ -0.57
CHD4-204ENST00000535810 SOGA3Q5TF21 947 aa11.46□□□□□ -0.57
CHD4-204ENST00000535810 PPP1R42Q7Z4L9 355 aa11.46□□□□□ -0.57
CHD4-204ENST00000535810 C8orf58Q8NAV2 365 aa11.46□□□□□ -0.57
CHD4-204ENST00000535810 SMC1BQ8NDV3 1235 aa11.46□□□□□ -0.57
CHD4-204ENST00000535810 TAOK3Q9H2K8 898 aa11.46□□□□□ -0.57
CHD4-204ENST00000535810 TIAM2Q8IVF5 1701 aa11.46□□□□□ -0.58
CHD4-204ENST00000535810 RNF123Q5XPI4 1314 aa11.45□□□□□ -0.58
CHD4-204ENST00000535810 ELL2O00472 640 aaPredicted RBP11.45□□□□□ -0.58
CHD4-204ENST00000535810 TCIRG1Q13488 830 aa11.45□□□□□ -0.58
CHD4-204ENST00000535810 CHADLQ6NUI6 762 aa11.45□□□□□ -0.58
CHD4-204ENST00000535810 C3orf67Q6ZVT6 689 aa11.45□□□□□ -0.58
CHD4-204ENST00000535810 NLRP10Q86W26 655 aa11.45□□□□□ -0.58
CHD4-204ENST00000535810 PLBD2Q8NHP8 589 aa11.45□□□□□ -0.58
CHD4-204ENST00000535810 TSR2Q969E8 191 aaKnown RBP11.45□□□□□ -0.58
CHD4-204ENST00000535810 UTP14AQ9BVJ6 771 aaKnown RBP11.45□□□□□ -0.58
CHD4-204ENST00000535810 HYPKQ9NX55 129 aa11.45□□□□□ -0.58
CHD4-204ENST00000535810 ALDH1B1P30837 517 aa11.44□□□□□ -0.58
CHD4-204ENST00000535810 HOXA10P31260 410 aaPredicted RBP11.44□□□□□ -0.58
CHD4-204ENST00000535810 CCDC93Q567U6 631 aa11.44□□□□□ -0.58
CHD4-204ENST00000535810 OLFM4Q6UX06 510 aa11.44□□□□□ -0.58
CHD4-204ENST00000535810 ANKRD13DQ6ZTN6 518 aa11.44□□□□□ -0.58
CHD4-204ENST00000535810 SNED1Q8TER0 1413 aa11.43□□□□□ -0.58
CHD4-204ENST00000535810 IL16Q14005 1332 aa11.43□□□□□ -0.58
CHD4-204ENST00000535810 CCDC88AQ3V6T2 1871 aa11.43□□□□□ -0.58
CHD4-204ENST00000535810 SLC10A5Q5PT55 438 aa11.43□□□□□ -0.58
CHD4-204ENST00000535810 TSPYL6Q8N831 410 aa11.43□□□□□ -0.58
CHD4-204ENST00000535810 RPGRQ92834 1020 aaKnown RBP11.43□□□□□ -0.58
CHD4-204ENST00000535810 DCAF8Q5TAQ9 597 aa11.42□□□□□ -0.58
CHD4-204ENST00000535810 NLRP3Q96P20 1036 aa11.42□□□□□ -0.58
CHD4-204ENST00000535810 ISCA1Q9BUE6 129 aa11.42□□□□□ -0.58
CHD4-204ENST00000535810 PHAXQ9H814 394 aaKnown RBP11.42□□□□□ -0.58
CHD4-204ENST00000535810 RRAGCQ9HB90 399 aa11.42□□□□□ -0.58
CHD4-204ENST00000535810 TRMT112Q9UI30 125 aaKnown RBP11.42□□□□□ -0.58
CHD4-204ENST00000535810 SH3TC1Q8TE82 1336 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 773 ms