RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 KIF6Q6ZMV9 814 aa14.81□□□□□ -0.04
CLSTN3-206ENST00000535668 TTLL7Q6ZT98 887 aa14.81□□□□□ -0.04
CLSTN3-206ENST00000535668 RTFDC1Q9BY42 306 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-206ENST00000535668 RASSF10A6NK89 507 aa14.8□□□□□ -0.04
CLSTN3-206ENST00000535668 TMEM88BA6NKF7 163 aa14.8□□□□□ -0.04
CLSTN3-206ENST00000535668 GTF2E1P29083 439 aaPredicted RBP14.8□□□□□ -0.04
CLSTN3-206ENST00000535668 EPHX2P34913 555 aa14.8□□□□□ -0.04
CLSTN3-206ENST00000535668 SUSD4Q5VX71 490 aa14.79□□□□□ -0.04
CLSTN3-206ENST00000535668 OLFM4Q6UX06 510 aa14.79□□□□□ -0.04
CLSTN3-206ENST00000535668 PPP1R42Q7Z4L9 355 aa14.79□□□□□ -0.04
CLSTN3-206ENST00000535668 JDP2Q8WYK2 163 aa14.79□□□□□ -0.04
CLSTN3-206ENST00000535668 PRDM10Q9NQV6 1147 aa14.79□□□□□ -0.04
CLSTN3-206ENST00000535668 COL4A5P29400 1685 aa14.78□□□□□ -0.04
CLSTN3-206ENST00000535668 LMOD3Q0VAK6 560 aa14.78□□□□□ -0.04
CLSTN3-206ENST00000535668 CNGB1Q14028 1251 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-206ENST00000535668 RBM17Q96I25 401 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-206ENST00000535668 ATP6V0A2Q9Y487 856 aa14.78□□□□□ -0.04
CLSTN3-206ENST00000535668 CDHR2Q9BYE9 1310 aa14.77□□□□□ -0.04
CLSTN3-206ENST00000535668 MAPK8IP3Q9UPT6 1336 aa14.77□□□□□ -0.04
CLSTN3-206ENST00000535668 CHL1O00533 1208 aa14.77□□□□□ -0.05
CLSTN3-206ENST00000535668 BBOX1O75936 387 aa14.77□□□□□ -0.05
CLSTN3-206ENST00000535668 HOXB7P09629 217 aa14.77□□□□□ -0.05
CLSTN3-206ENST00000535668 NUTM1Q86Y26 1132 aa14.77□□□□□ -0.05
CLSTN3-206ENST00000535668 TNS4Q8IZW8 715 aa14.77□□□□□ -0.05
CLSTN3-206ENST00000535668 WBP1LQ9NX94 342 aa14.77□□□□□ -0.05
CLSTN3-206ENST00000535668 RRP7AQ9Y3A4 280 aaKnown RBP14.77□□□□□ -0.05
CLSTN3-206ENST00000535668 TMPOP42166 694 aaKnown RBP14.76□□□□□ -0.05
CLSTN3-206ENST00000535668 SCNN1DP51172 638 aa14.76□□□□□ -0.05
CLSTN3-206ENST00000535668 HSP90AB3PQ58FF7 597 aa14.76□□□□□ -0.05
CLSTN3-206ENST00000535668 USP50Q70EL3 339 aaPredicted RBP14.76□□□□□ -0.05
CLSTN3-206ENST00000535668 CNTROBQ8N137 903 aa14.76□□□□□ -0.05
CLSTN3-206ENST00000535668 RPGRQ92834 1020 aaKnown RBP14.76□□□□□ -0.05
CLSTN3-206ENST00000535668 NLRP3Q96P20 1036 aa14.76□□□□□ -0.05
CLSTN3-206ENST00000535668 THUMPD2Q9BTF0 503 aaKnown RBP14.76□□□□□ -0.05
CLSTN3-206ENST00000535668 PGAP2Q9UHJ9 254 aa14.76□□□□□ -0.05
CLSTN3-206ENST00000535668 EIF6P56537 245 aaKnown RBP14.75□□□□□ -0.05
CLSTN3-206ENST00000535668 RIPK4P57078 832 aa14.75□□□□□ -0.05
CLSTN3-206ENST00000535668 TMC4Q7Z404 712 aa14.75□□□□□ -0.05
CLSTN3-206ENST00000535668 SP8Q8IXZ3 490 aa14.75□□□□□ -0.05
CLSTN3-206ENST00000535668 UTP14AQ9BVJ6 771 aaKnown RBP14.75□□□□□ -0.05
CLSTN3-206ENST00000535668 TSPYL4Q9UJ04 414 aa14.75□□□□□ -0.05
CLSTN3-206ENST00000535668 ANKRD36CQ5JPF3 1778 aa14.75□□□□□ -0.05
CLSTN3-206ENST00000535668 VEGFBP49765 207 aa14.74□□□□□ -0.05
CLSTN3-206ENST00000535668 C3orf67Q6ZVT6 689 aa14.74□□□□□ -0.05
CLSTN3-206ENST00000535668 ZBTB3Q9H5J0 574 aa14.74□□□□□ -0.05
CLSTN3-206ENST00000535668 DDX21Q9NR30 783 aaKnown RBP eCLIP14.74□□□□□ -0.05
CLSTN3-206ENST00000535668 LTBP1Q14766 1721 aa14.74□□□□□ -0.05
CLSTN3-206ENST00000535668 THSD7BQ9C0I4 1608 aa14.74□□□□□ -0.05
CLSTN3-206ENST00000535668 PPEF1O14829 653 aaPredicted RBP14.73□□□□□ -0.05
CLSTN3-206ENST00000535668 MYL6BP14649 208 aa14.73□□□□□ -0.05
CLSTN3-206ENST00000535668 GPTP24298 496 aa14.73□□□□□ -0.05
CLSTN3-206ENST00000535668 TRIM28Q13263 835 aaKnown RBP14.73□□□□□ -0.05
CLSTN3-206ENST00000535668 TCIRG1Q13488 830 aa14.73□□□□□ -0.05
CLSTN3-206ENST00000535668 NLRP10Q86W26 655 aa14.73□□□□□ -0.05
CLSTN3-206ENST00000535668 SUPT20HQ8NEM7 779 aa14.73□□□□□ -0.05
CLSTN3-206ENST00000535668 MKRN1Q9UHC7 482 aaKnown RBP14.73□□□□□ -0.05
CLSTN3-206ENST00000535668 FAM177BA6PVY3 158 aa14.72□□□□□ -0.05
CLSTN3-206ENST00000535668 CTCFP49711 727 aaPredicted RBP14.72□□□□□ -0.05
CLSTN3-206ENST00000535668 KIAA2012Q0VF49 1180 aa14.72□□□□□ -0.05
CLSTN3-206ENST00000535668 LARGE2Q8N3Y3 721 aa14.72□□□□□ -0.05
CLSTN3-206ENST00000535668 ZC3H15Q8WU90 426 aaKnown RBP14.72□□□□□ -0.05
CLSTN3-206ENST00000535668 HHIPL1Q96JK4 782 aa14.72□□□□□ -0.05
CLSTN3-206ENST00000535668 ZNRF3Q9ULT6 936 aa14.72□□□□□ -0.05
CLSTN3-206ENST00000535668 ABCC4O15439 1325 aa14.71□□□□□ -0.05
CLSTN3-206ENST00000535668 FOXN1O15353 648 aa14.71□□□□□ -0.05
CLSTN3-206ENST00000535668 PROSER3Q2NL68 480 aa14.71□□□□□ -0.05
CLSTN3-206ENST00000535668 DEFB115Q30KQ5 88 aa14.71□□□□□ -0.05
CLSTN3-206ENST00000535668 NGEFQ8N5V2 710 aa14.71□□□□□ -0.05
CLSTN3-206ENST00000535668 GPRC5DQ9NZD1 345 aa14.71□□□□□ -0.05
CLSTN3-206ENST00000535668 LMOD1P29536 600 aaPredicted RBP14.7□□□□□ -0.06
CLSTN3-206ENST00000535668 EPS15P42566 896 aa14.7□□□□□ -0.06
CLSTN3-206ENST00000535668 MAP2K1Q02750 393 aaPredicted RBP14.7□□□□□ -0.06
CLSTN3-206ENST00000535668 SF3B3Q15393 1217 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-206ENST00000535668 EAPPQ56P03 285 aaPredicted RBP14.7□□□□□ -0.06
CLSTN3-206ENST00000535668 MAP1SQ66K74 1059 aaPredicted RBP14.7□□□□□ -0.06
CLSTN3-206ENST00000535668 COPS6Q7L5N1 327 aa14.7□□□□□ -0.06
CLSTN3-206ENST00000535668 ADARB2Q9NS39 739 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-206ENST00000535668 TRIM35Q9UPQ4 493 aa14.7□□□□□ -0.06
CLSTN3-206ENST00000535668 LRRC37AA6NMS7 1700 aa14.69□□□□□ -0.06
CLSTN3-206ENST00000535668 SH3TC1Q8TE82 1336 aa14.69□□□□□ -0.06
CLSTN3-206ENST00000535668 MYBBP1AQ9BQG0 1328 aaKnown RBP14.69□□□□□ -0.06
CLSTN3-206ENST00000535668 CXCL9Q07325 125 aa14.69□□□□□ -0.06
CLSTN3-206ENST00000535668 NIM1KQ8IY84 436 aa14.69□□□□□ -0.06
CLSTN3-206ENST00000535668 PLBD2Q8NHP8 589 aa14.69□□□□□ -0.06
CLSTN3-206ENST00000535668 ISCA1Q9BUE6 129 aa14.69□□□□□ -0.06
CLSTN3-206ENST00000535668 TMX4Q9H1E5 349 aaPredicted RBP14.69□□□□□ -0.06
CLSTN3-206ENST00000535668 PPIP5K2O43314 1243 aa14.68□□□□□ -0.06
CLSTN3-206ENST00000535668 ZNF853P0CG23 659 aa14.68□□□□□ -0.06
CLSTN3-206ENST00000535668 GRAPQ13588 217 aa14.68□□□□□ -0.06
CLSTN3-206ENST00000535668 CST9Q5W186 159 aa14.68□□□□□ -0.06
CLSTN3-206ENST00000535668 GRAPLQ8TC17 118 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-206ENST00000535668 XAGE3Q8WTP9 111 aa14.68□□□□□ -0.06
CLSTN3-206ENST00000535668 RUNDC1Q96C34 613 aa14.68□□□□□ -0.06
CLSTN3-206ENST00000535668 CFAP44Q96MT7 982 aa14.68□□□□□ -0.06
CLSTN3-206ENST00000535668 DBF4Q9UBU7 674 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-206ENST00000535668 WDR33Q9C0J8 1336 aaKnown RBP14.67□□□□□ -0.06
CLSTN3-206ENST00000535668 EIF2S2P20042 333 aaKnown RBP14.67□□□□□ -0.06
CLSTN3-206ENST00000535668 MAP2K2P36507 400 aa14.67□□□□□ -0.06
CLSTN3-206ENST00000535668 DPF2Q92785 391 aa14.67□□□□□ -0.06
CLSTN3-206ENST00000535668 CLEC11AQ9Y240 323 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms