RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 RIC1Q4ADV7 1423 aa21.09■□□□□ 0.97
CLSTN3-204ENST00000535313 HOXA10P31260 410 aaPredicted RBP21.08■□□□□ 0.97
CLSTN3-204ENST00000535313 RBM17Q96I25 401 aaKnown RBP21.08■□□□□ 0.97
CLSTN3-204ENST00000535313 CFAP44Q96MT7 982 aa21.08■□□□□ 0.97
CLSTN3-204ENST00000535313 ZNF277Q9NRM2 450 aaPredicted RBP21.08■□□□□ 0.97
CLSTN3-204ENST00000535313 HOXB7P09629 217 aa21.07■□□□□ 0.96
CLSTN3-204ENST00000535313 ZEB1P37275 1124 aaPredicted RBP21.07■□□□□ 0.96
CLSTN3-204ENST00000535313 HDGFL1Q5TGJ6 251 aa21.07■□□□□ 0.96
CLSTN3-204ENST00000535313 CC2D2BQ6DHV5 1058 aa21.07■□□□□ 0.96
CLSTN3-204ENST00000535313 NLRP3Q96P20 1036 aa21.07■□□□□ 0.96
CLSTN3-204ENST00000535313 WDR90Q96KV7 1748 aa21.07■□□□□ 0.96
CLSTN3-204ENST00000535313 POTECB2RU33 542 aa21.06■□□□□ 0.96
CLSTN3-204ENST00000535313 APAF1O14727 1248 aa21.06■□□□□ 0.96
CLSTN3-204ENST00000535313 DDNO94850 711 aaPredicted RBP21.06■□□□□ 0.96
CLSTN3-204ENST00000535313 SYNE4Q8N205 404 aa21.06■□□□□ 0.96
CLSTN3-204ENST00000535313 CHPF2Q9P2E5 772 aa21.06■□□□□ 0.96
CLSTN3-204ENST00000535313 CALD1Q05682 793 aaKnown RBP21.05■□□□□ 0.96
CLSTN3-204ENST00000535313 CRAMP1Q96RY5 1269 aa21.05■□□□□ 0.96
CLSTN3-204ENST00000535313 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
CLSTN3-204ENST00000535313 IARSP41252 1262 aaKnown RBP21.04■□□□□ 0.96
CLSTN3-204ENST00000535313 TCIRG1Q13488 830 aa21.04■□□□□ 0.96
CLSTN3-204ENST00000535313 GRIPAP1Q4V328 841 aa21.04■□□□□ 0.96
CLSTN3-204ENST00000535313 SLC10A5Q5PT55 438 aa21.04■□□□□ 0.96
CLSTN3-204ENST00000535313 DNAJC5GQ8N7S2 189 aa21.04■□□□□ 0.96
CLSTN3-204ENST00000535313 PSMD1Q99460 953 aa21.04■□□□□ 0.96
CLSTN3-204ENST00000535313 MBIPQ9NS73 344 aa21.04■□□□□ 0.96
CLSTN3-204ENST00000535313 DBF4Q9UBU7 674 aaPredicted RBP21.04■□□□□ 0.96
CLSTN3-204ENST00000535313 DUSP27Q5VZP5 1158 aa21.03■□□□□ 0.96
CLSTN3-204ENST00000535313 NLRP10Q86W26 655 aa21.03■□□□□ 0.96
CLSTN3-204ENST00000535313 TMX4Q9H1E5 349 aaPredicted RBP21.03■□□□□ 0.96
CLSTN3-204ENST00000535313 IQCA1LA6NCM1 817 aa21.02■□□□□ 0.96
CLSTN3-204ENST00000535313 PPEF1O14829 653 aaPredicted RBP21.02■□□□□ 0.96
CLSTN3-204ENST00000535313 HTRA3P83110 453 aa21.02■□□□□ 0.96
CLSTN3-204ENST00000535313 C3orf67Q6ZVT6 689 aa21.02■□□□□ 0.96
CLSTN3-204ENST00000535313 IFT57Q9NWB7 429 aa21.02■□□□□ 0.96
CLSTN3-204ENST00000535313 ZNF853P0CG23 659 aa21.01■□□□□ 0.95
CLSTN3-204ENST00000535313 GNAI1P63096 354 aa21.01■□□□□ 0.95
CLSTN3-204ENST00000535313 ANKRD13DQ6ZTN6 518 aa21.01■□□□□ 0.95
CLSTN3-204ENST00000535313 PLBD2Q8NHP8 589 aa21.01■□□□□ 0.95
CLSTN3-204ENST00000535313 JDP2Q8WYK2 163 aa21.01■□□□□ 0.95
CLSTN3-204ENST00000535313 HYPKQ9NX55 129 aa21.01■□□□□ 0.95
CLSTN3-204ENST00000535313 TRMT112Q9UI30 125 aaKnown RBP21.01■□□□□ 0.95
CLSTN3-204ENST00000535313 TCERG1O14776 1098 aaKnown RBP21■□□□□ 0.95
CLSTN3-204ENST00000535313 L3MBTL3Q96JM7 780 aaPredicted RBP21■□□□□ 0.95
CLSTN3-204ENST00000535313 SH3TC1Q8TE82 1336 aa21■□□□□ 0.95
CLSTN3-204ENST00000535313 ZNF541Q9H0D2 1346 aa21■□□□□ 0.95
CLSTN3-204ENST00000535313 SNED1Q8TER0 1413 aa20.99■□□□□ 0.95
CLSTN3-204ENST00000535313 ANKRD36CQ5JPF3 1778 aa20.98■□□□□ 0.95
CLSTN3-204ENST00000535313 FZD9O00144 591 aa20.98■□□□□ 0.95
CLSTN3-204ENST00000535313 HCLS1P14317 486 aaPredicted RBP20.98■□□□□ 0.95
CLSTN3-204ENST00000535313 CHADLQ6NUI6 762 aa20.98■□□□□ 0.95
CLSTN3-204ENST00000535313 KLRG1Q96E93 195 aa20.98■□□□□ 0.95
CLSTN3-204ENST00000535313 ATP6V0A2Q9Y487 856 aa20.97■□□□□ 0.95
CLSTN3-204ENST00000535313 ABCC4O15439 1325 aa20.97■□□□□ 0.95
CLSTN3-204ENST00000535313 BBOX1O75936 387 aa20.96■□□□□ 0.95
CLSTN3-204ENST00000535313 EIF6P56537 245 aaKnown RBP20.96■□□□□ 0.95
CLSTN3-204ENST00000535313 DDX46Q7L014 1031 aaKnown RBP20.96■□□□□ 0.95
CLSTN3-204ENST00000535313 LARGE2Q8N3Y3 721 aa20.96■□□□□ 0.95
CLSTN3-204ENST00000535313 TAF1DQ9H5J8 278 aaPredicted RBP20.96■□□□□ 0.95
CLSTN3-204ENST00000535313 ELL2O00472 640 aaPredicted RBP20.95■□□□□ 0.94
CLSTN3-204ENST00000535313 LDHDQ86WU2 507 aa20.95■□□□□ 0.94
CLSTN3-204ENST00000535313 GPC2Q8N158 579 aa20.95■□□□□ 0.94
CLSTN3-204ENST00000535313 ISCA1Q9BUE6 129 aa20.95■□□□□ 0.94
CLSTN3-204ENST00000535313 CHMP4AQ9BY43 222 aa20.95■□□□□ 0.94
CLSTN3-204ENST00000535313 HACL1Q9UJ83 578 aa20.95■□□□□ 0.94
CLSTN3-204ENST00000535313 SCN4AP35499 1836 aa20.94■□□□□ 0.94
CLSTN3-204ENST00000535313 ATP5J2-PTCD1G3V325 749 aa20.94■□□□□ 0.94
CLSTN3-204ENST00000535313 POTEIP0CG38 1075 aa20.94■□□□□ 0.94
CLSTN3-204ENST00000535313 POTEJP0CG39 1038 aa20.94■□□□□ 0.94
CLSTN3-204ENST00000535313 GOLGA2Q08379 1002 aa20.94■□□□□ 0.94
CLSTN3-204ENST00000535313 ZNF428Q96B54 188 aa20.94■□□□□ 0.94
CLSTN3-204ENST00000535313 CCDC184Q52MB2 194 aa20.93■□□□□ 0.94
CLSTN3-204ENST00000535313 RIC3Q7Z5B4 369 aa20.93■□□□□ 0.94
CLSTN3-204ENST00000535313 SLC51AQ86UW1 340 aa20.93■□□□□ 0.94
CLSTN3-204ENST00000535313 SUPT20HQ8NEM7 779 aa20.93■□□□□ 0.94
CLSTN3-204ENST00000535313 PPIP5K2O43314 1243 aa20.92■□□□□ 0.94
CLSTN3-204ENST00000535313 GRAPQ13588 217 aa20.92■□□□□ 0.94
CLSTN3-204ENST00000535313 EAPPQ56P03 285 aaPredicted RBP20.92■□□□□ 0.94
CLSTN3-204ENST00000535313 SP8Q8IXZ3 490 aa20.92■□□□□ 0.94
CLSTN3-204ENST00000535313 NIM1KQ8IY84 436 aa20.92■□□□□ 0.94
CLSTN3-204ENST00000535313 GRAPLQ8TC17 118 aaPredicted RBP20.92■□□□□ 0.94
CLSTN3-204ENST00000535313 FAM89AQ96GI7 184 aa20.92■□□□□ 0.94
CLSTN3-204ENST00000535313 VPS33BQ9H267 617 aa20.92■□□□□ 0.94
CLSTN3-204ENST00000535313 GJA3Q9Y6H8 435 aa20.92■□□□□ 0.94
CLSTN3-204ENST00000535313 ZNF316A6NFI3 1004 aaPredicted RBP20.91■□□□□ 0.94
CLSTN3-204ENST00000535313 ANP32CO43423 234 aa20.91■□□□□ 0.94
CLSTN3-204ENST00000535313 EPHX2P34913 555 aa20.91■□□□□ 0.94
CLSTN3-204ENST00000535313 TRIM28Q13263 835 aaKnown RBP20.91■□□□□ 0.94
CLSTN3-204ENST00000535313 DPP8Q6V1X1 898 aaPredicted RBP20.91■□□□□ 0.94
CLSTN3-204ENST00000535313 PNMA8AQ86V59 439 aaPredicted RBP20.91■□□□□ 0.94
CLSTN3-204ENST00000535313 JMYQ8N9B5 988 aa20.91■□□□□ 0.94
CLSTN3-204ENST00000535313 C8orf58Q8NAV2 365 aa20.91■□□□□ 0.94
CLSTN3-204ENST00000535313 CLEC11AQ9Y240 323 aa20.91■□□□□ 0.94
CLSTN3-204ENST00000535313 CCDC30Q5VVM6 783 aa20.9■□□□□ 0.94
CLSTN3-204ENST00000535313 TMC4Q7Z404 712 aa20.9■□□□□ 0.94
CLSTN3-204ENST00000535313 MPNDQ8N594 471 aa20.9■□□□□ 0.94
CLSTN3-204ENST00000535313 PHAXQ9H814 394 aaKnown RBP20.9■□□□□ 0.94
CLSTN3-204ENST00000535313 LMOD1P29536 600 aaPredicted RBP20.89■□□□□ 0.93
CLSTN3-204ENST00000535313 AOC3Q16853 763 aa20.89■□□□□ 0.93
CLSTN3-204ENST00000535313 CCDC27Q2M243 656 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms