RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 UTP14AQ9BVJ6 771 aaKnown RBP17.81■□□□□ 0.44
TMEM258-203ENST00000535297 CCER2I3L3R5 266 aa17.8■□□□□ 0.44
TMEM258-203ENST00000535297 GOLGA2Q08379 1002 aa17.8■□□□□ 0.44
TMEM258-203ENST00000535297 TWISTNBQ3B726 338 aaPredicted RBP17.8■□□□□ 0.44
TMEM258-203ENST00000535297 NFKBIEO00221 500 aa17.79■□□□□ 0.44
TMEM258-203ENST00000535297 C21orf2O43822 256 aa17.79■□□□□ 0.44
TMEM258-203ENST00000535297 RASSF7Q02833 373 aa17.79■□□□□ 0.44
TMEM258-203ENST00000535297 RNF181Q9P0P0 153 aa17.79■□□□□ 0.44
TMEM258-203ENST00000535297 TIAM2Q8IVF5 1701 aa17.78■□□□□ 0.44
TMEM258-203ENST00000535297 LTBP3Q9NS15 1303 aa17.78■□□□□ 0.44
TMEM258-203ENST00000535297 ZC3H4Q9UPT8 1303 aaKnown RBP17.78■□□□□ 0.44
TMEM258-203ENST00000535297 LMNB1P20700 586 aa17.78■□□□□ 0.44
TMEM258-203ENST00000535297 ALDH1B1P30837 517 aa17.78■□□□□ 0.44
TMEM258-203ENST00000535297 SLC10A5Q5PT55 438 aa17.78■□□□□ 0.44
TMEM258-203ENST00000535297 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
TMEM258-203ENST00000535297 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
TMEM258-203ENST00000535297 PHAXQ9H814 394 aaKnown RBP17.78■□□□□ 0.44
TMEM258-203ENST00000535297 GPBP1L1Q9HC44 474 aaPredicted RBP17.78■□□□□ 0.44
TMEM258-203ENST00000535297 LAMB2P55268 1798 aa17.78■□□□□ 0.44
TMEM258-203ENST00000535297 CCDC88AQ3V6T2 1871 aa17.78■□□□□ 0.44
TMEM258-203ENST00000535297 CACNA1FO60840 1977 aa17.77■□□□□ 0.44
TMEM258-203ENST00000535297 RPGRQ92834 1020 aaKnown RBP17.77■□□□□ 0.44
TMEM258-203ENST00000535297 MYH16Q9H6N6 1097 aa17.77■□□□□ 0.44
TMEM258-203ENST00000535297 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
TMEM258-203ENST00000535297 DICER1Q9UPY3 1922 aaKnown RBP17.76■□□□□ 0.43
TMEM258-203ENST00000535297 SH3TC1Q8TE82 1336 aa17.76■□□□□ 0.43
TMEM258-203ENST00000535297 ZNF521Q96K83 1311 aa17.76■□□□□ 0.43
TMEM258-203ENST00000535297 DDX58O95786 925 aaKnown RBP17.76■□□□□ 0.43
TMEM258-203ENST00000535297 HOXA10P31260 410 aaPredicted RBP17.76■□□□□ 0.43
TMEM258-203ENST00000535297 CCDC93Q567U6 631 aa17.76■□□□□ 0.43
TMEM258-203ENST00000535297 RIC3Q7Z5B4 369 aa17.76■□□□□ 0.43
TMEM258-203ENST00000535297 C7orf43Q8WVR3 580 aa17.76■□□□□ 0.43
TMEM258-203ENST00000535297 NLRP3Q96P20 1036 aa17.76■□□□□ 0.43
TMEM258-203ENST00000535297 TRMT112Q9UI30 125 aaKnown RBP17.76■□□□□ 0.43
TMEM258-203ENST00000535297 DDX60Q8IY21 1712 aaKnown RBP17.75■□□□□ 0.43
TMEM258-203ENST00000535297 TRIM28Q13263 835 aaKnown RBP17.75■□□□□ 0.43
TMEM258-203ENST00000535297 ZNF526Q8TF50 670 aaPredicted RBP17.75■□□□□ 0.43
TMEM258-203ENST00000535297 RBM17Q96I25 401 aaKnown RBP17.75■□□□□ 0.43
TMEM258-203ENST00000535297 TAOK3Q9H2K8 898 aa17.75■□□□□ 0.43
TMEM258-203ENST00000535297 PRELPP51888 382 aa17.74■□□□□ 0.43
TMEM258-203ENST00000535297 C3orf67Q6ZVT6 689 aa17.74■□□□□ 0.43
TMEM258-203ENST00000535297 CRAMP1Q96RY5 1269 aa17.74■□□□□ 0.43
TMEM258-203ENST00000535297 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
TMEM258-203ENST00000535297 ATP5J2-PTCD1G3V325 749 aa17.73■□□□□ 0.43
TMEM258-203ENST00000535297 EXOSC9Q06265 439 aaKnown RBP17.73■□□□□ 0.43
TMEM258-203ENST00000535297 VAMP4O75379 141 aa17.72■□□□□ 0.43
TMEM258-203ENST00000535297 METTL22Q9BUU2 404 aaPredicted RBP17.72■□□□□ 0.43
TMEM258-203ENST00000535297 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
TMEM258-203ENST00000535297 TCERG1O14776 1098 aaKnown RBP17.71■□□□□ 0.43
TMEM258-203ENST00000535297 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
TMEM258-203ENST00000535297 HCLS1P14317 486 aaPredicted RBP17.71■□□□□ 0.43
TMEM258-203ENST00000535297 CC2D2BQ6DHV5 1058 aa17.71■□□□□ 0.43
TMEM258-203ENST00000535297 KSR2Q6VAB6 950 aa17.71■□□□□ 0.43
TMEM258-203ENST00000535297 RTKN2Q8IZC4 609 aa17.71■□□□□ 0.43
TMEM258-203ENST00000535297 SYNE4Q8N205 404 aa17.71■□□□□ 0.43
TMEM258-203ENST00000535297 MYD88Q99836 296 aa17.71■□□□□ 0.43
TMEM258-203ENST00000535297 KDM2BQ8NHM5 1336 aa17.71■□□□□ 0.42
TMEM258-203ENST00000535297 FKBP4Q02790 459 aaKnown RBP eCLIP17.7■□□□□ 0.42
TMEM258-203ENST00000535297 CCDC191Q8NCU4 936 aa17.7■□□□□ 0.42
TMEM258-203ENST00000535297 MAP3K2Q9Y2U5 619 aa17.7■□□□□ 0.42
TMEM258-203ENST00000535297 PI4KAP2A4QPH2 592 aa17.69■□□□□ 0.42
TMEM258-203ENST00000535297 PPEF1O14829 653 aaPredicted RBP17.69■□□□□ 0.42
TMEM258-203ENST00000535297 C1QTNF8P60827 252 aa17.69■□□□□ 0.42
TMEM258-203ENST00000535297 GRIPAP1Q4V328 841 aa17.69■□□□□ 0.42
TMEM258-203ENST00000535297 PI4KAP1Q8N8J0 262 aa17.69■□□□□ 0.42
TMEM258-203ENST00000535297 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
TMEM258-203ENST00000535297 ABCC4O15439 1325 aa17.69■□□□□ 0.42
TMEM258-203ENST00000535297 HSP90B1P14625 803 aaKnown RBP17.68■□□□□ 0.42
TMEM258-203ENST00000535297 FLIIQ13045 1269 aa17.68■□□□□ 0.42
TMEM258-203ENST00000535297 DIEXFQ68CQ4 756 aaKnown RBP17.68■□□□□ 0.42
TMEM258-203ENST00000535297 OLFM4Q6UX06 510 aa17.68■□□□□ 0.42
TMEM258-203ENST00000535297 G2E3Q7L622 706 aa17.68■□□□□ 0.42
TMEM258-203ENST00000535297 ZBTB38Q8NAP3 1195 aaPredicted RBP17.68■□□□□ 0.42
TMEM258-203ENST00000535297 CWC25Q9NXE8 425 aaPredicted RBP17.68■□□□□ 0.42
TMEM258-203ENST00000535297 E9PSI1 815 aa17.67■□□□□ 0.42
TMEM258-203ENST00000535297 IRS4O14654 1257 aaPredicted RBP17.67■□□□□ 0.42
TMEM258-203ENST00000535297 KIF3CO14782 793 aa17.67■□□□□ 0.42
TMEM258-203ENST00000535297 PCCAP05165 728 aaPredicted RBP17.67■□□□□ 0.42
TMEM258-203ENST00000535297 NEXNQ0ZGT2 675 aa17.67■□□□□ 0.42
TMEM258-203ENST00000535297 DDX46Q7L014 1031 aaKnown RBP17.67■□□□□ 0.42
TMEM258-203ENST00000535297 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
TMEM258-203ENST00000535297 PSMD1Q99460 953 aa17.67■□□□□ 0.42
TMEM258-203ENST00000535297 GRAPQ13588 217 aa17.66■□□□□ 0.42
TMEM258-203ENST00000535297 SF3B3Q15393 1217 aaKnown RBP17.66■□□□□ 0.42
TMEM258-203ENST00000535297 GRAPLQ8TC17 118 aaPredicted RBP17.66■□□□□ 0.42
TMEM258-203ENST00000535297 NMRK2Q9NPI5 230 aa17.66■□□□□ 0.42
TMEM258-203ENST00000535297 LRRC37AA6NMS7 1700 aa17.66■□□□□ 0.42
TMEM258-203ENST00000535297 GLTPD2A6NH11 291 aa17.65■□□□□ 0.42
TMEM258-203ENST00000535297 BBOX1O75936 387 aa17.65■□□□□ 0.42
TMEM258-203ENST00000535297 IGKV5-2P06315 115 aa17.65■□□□□ 0.42
TMEM258-203ENST00000535297 FKBP5Q13451 457 aaPredicted RBP17.65■□□□□ 0.42
TMEM258-203ENST00000535297 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
TMEM258-203ENST00000535297 ATP6V0A2Q9Y487 856 aa17.65■□□□□ 0.42
TMEM258-203ENST00000535297 CDHR2Q9BYE9 1310 aa17.65■□□□□ 0.42
TMEM258-203ENST00000535297 WDR90Q96KV7 1748 aa17.64■□□□□ 0.41
TMEM258-203ENST00000535297 RTL5Q5HYW3 569 aaPredicted RBP17.64■□□□□ 0.41
TMEM258-203ENST00000535297 TMC4Q7Z404 712 aa17.64■□□□□ 0.41
TMEM258-203ENST00000535297 ZNF277Q9NRM2 450 aaPredicted RBP17.64■□□□□ 0.41
TMEM258-203ENST00000535297 TAF1P21675 1872 aa17.64■□□□□ 0.41
TMEM258-203ENST00000535297 NEURL1BA8MQ27 555 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms