RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 NUTM1Q86Y26 1132 aa11.01□□□□□ -0.65
RPUSD4-209ENST00000534393 ZNF34Q8IZ26 560 aa11.01□□□□□ -0.65
RPUSD4-209ENST00000534393 GPC2Q8N158 579 aa11.01□□□□□ -0.65
RPUSD4-209ENST00000534393 NLRP3Q96P20 1036 aa11.01□□□□□ -0.65
RPUSD4-209ENST00000534393 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
RPUSD4-209ENST00000534393 ZBTB3Q9H5J0 574 aa11.01□□□□□ -0.65
RPUSD4-209ENST00000534393 RNF123Q5XPI4 1314 aa11.01□□□□□ -0.65
RPUSD4-209ENST00000534393 EIF6P56537 245 aaKnown RBP11□□□□□ -0.65
RPUSD4-209ENST00000534393 HSP90AB3PQ58FF7 597 aa11□□□□□ -0.65
RPUSD4-209ENST00000534393 SUSD4Q5VX71 490 aa11□□□□□ -0.65
RPUSD4-209ENST00000534393 ABCC12Q96J65 1359 aa11□□□□□ -0.65
RPUSD4-209ENST00000534393 HSPA1AP0DMV8 641 aaKnown RBP10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 HSPA1BP0DMV9 641 aaKnown RBP10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 EIF2S2P20042 333 aaKnown RBP10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 EPHX2P34913 555 aa10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 TMPOP42166 694 aaKnown RBP10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 SLC10A5Q5PT55 438 aa10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 COL13A1Q5TAT6 717 aaPredicted RBP10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 OLFM4Q6UX06 510 aa10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 UTP14AQ9BVJ6 771 aaKnown RBP10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 VPS33BQ9H267 617 aa10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 UBN2Q6ZU65 1347 aa10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 PASKQ96RG2 1323 aa10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 ZNF541Q9H0D2 1346 aa10.99□□□□□ -0.65
RPUSD4-209ENST00000534393 NTSR2O95665 410 aa10.98□□□□□ -0.65
RPUSD4-209ENST00000534393 POTEIP0CG38 1075 aa10.98□□□□□ -0.65
RPUSD4-209ENST00000534393 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
RPUSD4-209ENST00000534393 LMOD1P29536 600 aaPredicted RBP10.98□□□□□ -0.65
RPUSD4-209ENST00000534393 LARGE2Q8N3Y3 721 aa10.98□□□□□ -0.65
RPUSD4-209ENST00000534393 MYBBP1AQ9BQG0 1328 aaKnown RBP10.98□□□□□ -0.65
RPUSD4-209ENST00000534393 SNED1Q8TER0 1413 aa10.98□□□□□ -0.65
RPUSD4-209ENST00000534393 LAMB2P55268 1798 aa10.98□□□□□ -0.65
RPUSD4-209ENST00000534393 ADAMTSL1Q8N6G6 1762 aa10.98□□□□□ -0.65
RPUSD4-209ENST00000534393 TRPM7Q96QT4 1865 aa10.98□□□□□ -0.65
RPUSD4-209ENST00000534393 TMEM88BA6NKF7 163 aa10.97□□□□□ -0.65
RPUSD4-209ENST00000534393 PPEF1O14829 653 aaPredicted RBP10.97□□□□□ -0.65
RPUSD4-209ENST00000534393 BBOX1O75936 387 aa10.97□□□□□ -0.65
RPUSD4-209ENST00000534393 ITGBL1O95965 494 aaPredicted RBP10.97□□□□□ -0.65
RPUSD4-209ENST00000534393 PDIA6Q15084 440 aa10.97□□□□□ -0.65
RPUSD4-209ENST00000534393 TNS4Q8IZW8 715 aa10.97□□□□□ -0.65
RPUSD4-209ENST00000534393 SUPT20HQ8NEM7 779 aa10.97□□□□□ -0.65
RPUSD4-209ENST00000534393 DDX21Q9NR30 783 aaKnown RBP eCLIP10.97□□□□□ -0.65
RPUSD4-209ENST00000534393 CNTNAP1P78357 1384 aa10.96□□□□□ -0.65
RPUSD4-209ENST00000534393 WDR43Q15061 677 aaKnown RBP eCLIP10.96□□□□□ -0.65
RPUSD4-209ENST00000534393 DIEXFQ68CQ4 756 aaKnown RBP10.96□□□□□ -0.65
RPUSD4-209ENST00000534393 LRP10Q7Z4F1 713 aa10.96□□□□□ -0.65
RPUSD4-209ENST00000534393 NIM1KQ8IY84 436 aa10.96□□□□□ -0.65
RPUSD4-209ENST00000534393 CNTROBQ8N137 903 aa10.96□□□□□ -0.65
RPUSD4-209ENST00000534393 MKRN1Q9UHC7 482 aaKnown RBP10.96□□□□□ -0.65
RPUSD4-209ENST00000534393 ATP6V0A2Q9Y487 856 aa10.96□□□□□ -0.65
RPUSD4-209ENST00000534393 GJA3Q9Y6H8 435 aa10.96□□□□□ -0.65
RPUSD4-209ENST00000534393 CHL1O00533 1208 aa10.95□□□□□ -0.66
RPUSD4-209ENST00000534393 HOXB7P09629 217 aa10.95□□□□□ -0.66
RPUSD4-209ENST00000534393 TCIRG1Q13488 830 aa10.95□□□□□ -0.66
RPUSD4-209ENST00000534393 COPS6Q7L5N1 327 aa10.95□□□□□ -0.66
RPUSD4-209ENST00000534393 TMC4Q7Z404 712 aa10.95□□□□□ -0.66
RPUSD4-209ENST00000534393 RUNDC1Q96C34 613 aa10.95□□□□□ -0.66
RPUSD4-209ENST00000534393 SH3TC1Q8TE82 1336 aa10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 TCERG1O14776 1098 aaKnown RBP10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 PPIP5K2O43314 1243 aa10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 AIMP1Q12904 312 aaKnown RBP10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 DDX10Q13206 875 aaKnown RBP10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 NEUROD2Q15784 382 aa10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 PROSER3Q2NL68 480 aa10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 USP50Q70EL3 339 aaPredicted RBP10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 DDX46Q7L014 1031 aaKnown RBP10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 NLRP10Q86W26 655 aa10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 SP8Q8IXZ3 490 aa10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 XAGE3Q8WTP9 111 aa10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 TRMT112Q9UI30 125 aaKnown RBP10.94□□□□□ -0.66
RPUSD4-209ENST00000534393 TAF1P21675 1872 aa10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 ABCC4O15439 1325 aa10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 ANXA1P04083 346 aa10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 DEFB115Q30KQ5 88 aa10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 MAP1SQ66K74 1059 aaPredicted RBP10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 DPP8Q6V1X1 898 aaPredicted RBP10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 C3orf67Q6ZVT6 689 aa10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 AIDAQ96BJ3 306 aa10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 RTFDC1Q9BY42 306 aaPredicted RBP10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 DBF4Q9UBU7 674 aaPredicted RBP10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 ZNRF3Q9ULT6 936 aa10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 LAS1LQ9Y4W2 734 aaKnown RBP10.93□□□□□ -0.66
RPUSD4-209ENST00000534393 COL4A5P29400 1685 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 RASSF10A6NK89 507 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 VEGFBP49765 207 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 SCNN1DP51172 638 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 HDGFL1Q5TGJ6 251 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 CCDC146Q8IYE0 955 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 MPNDQ8N594 471 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 PLBD2Q8NHP8 589 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 NECTIN2Q92692 538 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 CHMP4AQ9BY43 222 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 PRDM10Q9NQV6 1147 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 HYPKQ9NX55 129 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 LTBP1Q14766 1721 aa10.92□□□□□ -0.66
RPUSD4-209ENST00000534393 CDHR2Q9BYE9 1310 aa10.91□□□□□ -0.66
RPUSD4-209ENST00000534393 HCLS1P14317 486 aaPredicted RBP10.91□□□□□ -0.66
RPUSD4-209ENST00000534393 HSP90B1P14625 803 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms