RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 ZBTB3Q9H5J0 574 aa28.2■■■□□ 2.1
SSH3-211ENST00000534112 UBN2Q6ZU65 1347 aa28.19■■■□□ 2.1
SSH3-211ENST00000534112 FOXN1O15353 648 aa28.19■■■□□ 2.1
SSH3-211ENST00000534112 SUSD4Q5VX71 490 aa28.19■■■□□ 2.1
SSH3-211ENST00000534112 MAP1SQ66K74 1059 aaPredicted RBP28.19■■■□□ 2.1
SSH3-211ENST00000534112 CNTROBQ8N137 903 aa28.19■■■□□ 2.1
SSH3-211ENST00000534112 IBTKQ9P2D0 1353 aaPredicted RBP28.17■■■□□ 2.1
SSH3-211ENST00000534112 ZNF34Q8IZ26 560 aa28.17■■■□□ 2.1
SSH3-211ENST00000534112 EIF6P56537 245 aaKnown RBP28.16■■■□□ 2.1
SSH3-211ENST00000534112 GRIPAP1Q4V328 841 aa28.16■■■□□ 2.1
SSH3-211ENST00000534112 RBM17Q96I25 401 aaKnown RBP28.16■■■□□ 2.1
SSH3-211ENST00000534112 CRAMP1Q96RY5 1269 aa28.16■■■□□ 2.1
SSH3-211ENST00000534112 GJA3Q9Y6H8 435 aa28.16■■■□□ 2.1
SSH3-211ENST00000534112 GIGYF2Q6Y7W6 1299 aaKnown RBP28.15■■■□□ 2.1
SSH3-211ENST00000534112 RIC1Q4ADV7 1423 aa28.15■■■□□ 2.1
SSH3-211ENST00000534112 LAMB4A4D0S4 1761 aa28.14■■■□□ 2.1
SSH3-211ENST00000534112 PNNQ9H307 717 aaKnown RBP28.14■■■□□ 2.1
SSH3-211ENST00000534112 PRDM10Q9NQV6 1147 aa28.14■■■□□ 2.1
SSH3-211ENST00000534112 ERBB4Q15303 1308 aa28.14■■■□□ 2.09
SSH3-211ENST00000534112 NTSR2O95665 410 aa28.13■■■□□ 2.09
SSH3-211ENST00000534112 C3orf67Q6ZVT6 689 aa28.13■■■□□ 2.09
SSH3-211ENST00000534112 LARGE2Q8N3Y3 721 aa28.13■■■□□ 2.09
SSH3-211ENST00000534112 AIDAQ96BJ3 306 aa28.13■■■□□ 2.09
SSH3-211ENST00000534112 RASSF10A6NK89 507 aa28.12■■■□□ 2.09
SSH3-211ENST00000534112 TCERG1O14776 1098 aaKnown RBP28.12■■■□□ 2.09
SSH3-211ENST00000534112 CTCFP49711 727 aaPredicted RBP28.12■■■□□ 2.09
SSH3-211ENST00000534112 DEFB115Q30KQ5 88 aa28.12■■■□□ 2.09
SSH3-211ENST00000534112 PPP1R42Q7Z4L9 355 aa28.12■■■□□ 2.09
SSH3-211ENST00000534112 SLC51AQ86UW1 340 aa28.12■■■□□ 2.09
SSH3-211ENST00000534112 WBP1LQ9NX94 342 aa28.12■■■□□ 2.09
SSH3-211ENST00000534112 MAPK8IP3Q9UPT6 1336 aa28.12■■■□□ 2.09
SSH3-211ENST00000534112 KDM3BQ7LBC6 1761 aa28.11■■■□□ 2.09
SSH3-211ENST00000534112 ADAMTSL1Q8N6G6 1762 aa28.11■■■□□ 2.09
SSH3-211ENST00000534112 COL4A5P29400 1685 aa28.11■■■□□ 2.09
SSH3-211ENST00000534112 PPEF1O14829 653 aaPredicted RBP28.11■■■□□ 2.09
SSH3-211ENST00000534112 LMOD1P29536 600 aaPredicted RBP28.11■■■□□ 2.09
SSH3-211ENST00000534112 PARP10Q53GL7 1025 aa28.1■■■□□ 2.09
SSH3-211ENST00000534112 TSPYL4Q9UJ04 414 aa28.1■■■□□ 2.09
SSH3-211ENST00000534112 NUP98P52948 1817 aa28.1■■■□□ 2.09
SSH3-211ENST00000534112 EPS15P42566 896 aa28.09■■■□□ 2.09
SSH3-211ENST00000534112 SCNN1DP51172 638 aa28.09■■■□□ 2.09
SSH3-211ENST00000534112 LRP10Q7Z4F1 713 aa28.09■■■□□ 2.09
SSH3-211ENST00000534112 NLRP3Q96P20 1036 aa28.09■■■□□ 2.09
SSH3-211ENST00000534112 PDIA6Q15084 440 aa28.08■■■□□ 2.09
SSH3-211ENST00000534112 DDX21Q9NR30 783 aaKnown RBP eCLIP28.08■■■□□ 2.09
SSH3-211ENST00000534112 DLG5Q8TDM6 1919 aa28.08■■■□□ 2.09
SSH3-211ENST00000534112 EIF2S2P20042 333 aaKnown RBP28.07■■■□□ 2.08
SSH3-211ENST00000534112 SLC10A5Q5PT55 438 aa28.07■■■□□ 2.08
SSH3-211ENST00000534112 UTP14AQ9BVJ6 771 aaKnown RBP28.07■■■□□ 2.08
SSH3-211ENST00000534112 ABT1Q9ULW3 272 aaKnown RBP28.07■■■□□ 2.08
SSH3-211ENST00000534112 NIM1KQ8IY84 436 aa28.06■■■□□ 2.08
SSH3-211ENST00000534112 TMX4Q9H1E5 349 aaPredicted RBP28.06■■■□□ 2.08
SSH3-211ENST00000534112 ATP6V0A2Q9Y487 856 aa28.06■■■□□ 2.08
SSH3-211ENST00000534112 PPIP5K2O43314 1243 aa28.05■■■□□ 2.08
SSH3-211ENST00000534112 PROSER3Q2NL68 480 aa28.05■■■□□ 2.08
SSH3-211ENST00000534112 WDR33Q9C0J8 1336 aaKnown RBP28.04■■■□□ 2.08
SSH3-211ENST00000534112 LBX1P52954 281 aa28.04■■■□□ 2.08
SSH3-211ENST00000534112 RIPK4P57078 832 aa28.04■■■□□ 2.08
SSH3-211ENST00000534112 USP50Q70EL3 339 aaPredicted RBP28.04■■■□□ 2.08
SSH3-211ENST00000534112 ANXA1P04083 346 aa28.03■■■□□ 2.08
SSH3-211ENST00000534112 FMR1Q06787 632 aaKnown RBP eCLIP28.03■■■□□ 2.08
SSH3-211ENST00000534112 AOC3Q16853 763 aa28.03■■■□□ 2.08
SSH3-211ENST00000534112 VPS33BQ9H267 617 aa28.03■■■□□ 2.08
SSH3-211ENST00000534112 BABAM1Q9NWV8 329 aa28.02■■■□□ 2.08
SSH3-211ENST00000534112 LTBP1Q14766 1721 aa28.01■■■□□ 2.07
SSH3-211ENST00000534112 ABCC4O15439 1325 aa28.01■■■□□ 2.07
SSH3-211ENST00000534112 MAP2K1Q02750 393 aaPredicted RBP28.01■■■□□ 2.07
SSH3-211ENST00000534112 RTFDC1Q9BY42 306 aaPredicted RBP28■■■□□ 2.07
SSH3-211ENST00000534112 BBOX1O75936 387 aa27.99■■■□□ 2.07
SSH3-211ENST00000534112 COPS6Q7L5N1 327 aa27.99■■■□□ 2.07
SSH3-211ENST00000534112 SUPT20HQ8NEM7 779 aa27.99■■■□□ 2.07
SSH3-211ENST00000534112 GPRC5DQ9NZD1 345 aa27.99■■■□□ 2.07
SSH3-211ENST00000534112 ZNRF3Q9ULT6 936 aa27.99■■■□□ 2.07
SSH3-211ENST00000534112 TRAF5O00463 557 aa27.98■■■□□ 2.07
SSH3-211ENST00000534112 HSPA8P11142 646 aaKnown RBP27.98■■■□□ 2.07
SSH3-211ENST00000534112 CXCL9Q07325 125 aa27.98■■■□□ 2.07
SSH3-211ENST00000534112 HSP90AB3PQ58FF7 597 aa27.98■■■□□ 2.07
SSH3-211ENST00000534112 CST9Q5W186 159 aa27.98■■■□□ 2.07
SSH3-211ENST00000534112 NLRP10Q86W26 655 aa27.98■■■□□ 2.07
SSH3-211ENST00000534112 ADARB2Q9NS39 739 aaKnown RBP27.98■■■□□ 2.07
SSH3-211ENST00000534112 HCLS1P14317 486 aaPredicted RBP27.97■■■□□ 2.07
SSH3-211ENST00000534112 TMPOP42166 694 aaKnown RBP27.97■■■□□ 2.07
SSH3-211ENST00000534112 AIMP1Q12904 312 aaKnown RBP27.97■■■□□ 2.07
SSH3-211ENST00000534112 SP8Q8IXZ3 490 aa27.97■■■□□ 2.07
SSH3-211ENST00000534112 XAGE3Q8WTP9 111 aa27.97■■■□□ 2.07
SSH3-211ENST00000534112 NECTIN2Q92692 538 aa27.97■■■□□ 2.07
SSH3-211ENST00000534112 DPP8Q6V1X1 898 aaPredicted RBP27.96■■■□□ 2.07
SSH3-211ENST00000534112 CAPNS2Q96L46 248 aa27.96■■■□□ 2.07
SSH3-211ENST00000534112 LMOD3Q0VAK6 560 aa27.95■■■□□ 2.06
SSH3-211ENST00000534112 TCIRG1Q13488 830 aa27.95■■■□□ 2.06
SSH3-211ENST00000534112 PAXIP1Q6ZW49 1069 aaPredicted RBP27.95■■■□□ 2.06
SSH3-211ENST00000534112 MPNDQ8N594 471 aa27.95■■■□□ 2.06
SSH3-211ENST00000534112 ECE1P42892 770 aa27.94■■■□□ 2.06
SSH3-211ENST00000534112 TRMT112Q9UI30 125 aaKnown RBP27.94■■■□□ 2.06
SSH3-211ENST00000534112 GMPSP49915 693 aaPredicted RBP27.93■■■□□ 2.06
SSH3-211ENST00000534112 KIAA2012Q0VF49 1180 aa27.93■■■□□ 2.06
SSH3-211ENST00000534112 CYP4F22Q6NT55 531 aa27.93■■■□□ 2.06
SSH3-211ENST00000534112 DDX46Q7L014 1031 aaKnown RBP27.93■■■□□ 2.06
SSH3-211ENST00000534112 GPR101Q96P66 508 aaPredicted RBP27.93■■■□□ 2.06
SSH3-211ENST00000534112 GRM1Q13255 1194 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms