RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 HSP90AB3PQ58FF7 597 aa23.09■■□□□ 1.29
AP003555.3-201ENST00000534086 DUSP27Q5VZP5 1158 aa23.09■■□□□ 1.29
AP003555.3-201ENST00000534086 RPGRQ92834 1020 aaKnown RBP23.09■■□□□ 1.29
AP003555.3-201ENST00000534086 UTP14AQ9BVJ6 771 aaKnown RBP23.09■■□□□ 1.29
AP003555.3-201ENST00000534086 IFT57Q9NWB7 429 aa23.09■■□□□ 1.29
AP003555.3-201ENST00000534086 DICER1Q9UPY3 1922 aaKnown RBP23.09■■□□□ 1.29
AP003555.3-201ENST00000534086 VEGFAP15692 232 aaPredicted RBP23.08■■□□□ 1.29
AP003555.3-201ENST00000534086 GNAI1P63096 354 aa23.08■■□□□ 1.29
AP003555.3-201ENST00000534086 RTKN2Q8IZC4 609 aa23.08■■□□□ 1.29
AP003555.3-201ENST00000534086 DBF4Q9UBU7 674 aaPredicted RBP23.08■■□□□ 1.29
AP003555.3-201ENST00000534086 RIC1Q4ADV7 1423 aa23.08■■□□□ 1.28
AP003555.3-201ENST00000534086 FKBP4Q02790 459 aaKnown RBP eCLIP23.07■■□□□ 1.28
AP003555.3-201ENST00000534086 OLFM4Q6UX06 510 aa23.07■■□□□ 1.28
AP003555.3-201ENST00000534086 HOXA10P31260 410 aaPredicted RBP23.06■■□□□ 1.28
AP003555.3-201ENST00000534086 TCIRG1Q13488 830 aa23.06■■□□□ 1.28
AP003555.3-201ENST00000534086 NLRP3Q96P20 1036 aa23.06■■□□□ 1.28
AP003555.3-201ENST00000534086 ANP32CO43423 234 aa23.05■■□□□ 1.28
AP003555.3-201ENST00000534086 FSTL1Q12841 308 aa23.05■■□□□ 1.28
AP003555.3-201ENST00000534086 RBM17Q96I25 401 aaKnown RBP23.05■■□□□ 1.28
AP003555.3-201ENST00000534086 APLP1P51693 650 aa23.04■■□□□ 1.28
AP003555.3-201ENST00000534086 SLC10A5Q5PT55 438 aa23.04■■□□□ 1.28
AP003555.3-201ENST00000534086 ANKRD13DQ6ZTN6 518 aa23.04■■□□□ 1.28
AP003555.3-201ENST00000534086 NLRP10Q86W26 655 aa23.04■■□□□ 1.28
AP003555.3-201ENST00000534086 ZNF277Q9NRM2 450 aaPredicted RBP23.04■■□□□ 1.28
AP003555.3-201ENST00000534086 HYPKQ9NX55 129 aa23.04■■□□□ 1.28
AP003555.3-201ENST00000534086 C3orf67Q6ZVT6 689 aa23.03■■□□□ 1.28
AP003555.3-201ENST00000534086 PLBD2Q8NHP8 589 aa23.03■■□□□ 1.28
AP003555.3-201ENST00000534086 CRAMP1Q96RY5 1269 aa23.03■■□□□ 1.28
AP003555.3-201ENST00000534086 RNF123Q5XPI4 1314 aa23.03■■□□□ 1.28
AP003555.3-201ENST00000534086 ELL2O00472 640 aaPredicted RBP23.02■■□□□ 1.28
AP003555.3-201ENST00000534086 CC2D2BQ6DHV5 1058 aa23.02■■□□□ 1.28
AP003555.3-201ENST00000534086 SYNE4Q8N205 404 aa23.02■■□□□ 1.28
AP003555.3-201ENST00000534086 MRS2Q9HD23 443 aa23.02■■□□□ 1.28
AP003555.3-201ENST00000534086 TRMT112Q9UI30 125 aaKnown RBP23.02■■□□□ 1.28
AP003555.3-201ENST00000534086 ANKRD36CQ5JPF3 1778 aa23.01■■□□□ 1.27
AP003555.3-201ENST00000534086 POTECB2RU33 542 aa23■■□□□ 1.27
AP003555.3-201ENST00000534086 DDNO94850 711 aaPredicted RBP23■■□□□ 1.27
AP003555.3-201ENST00000534086 SMC1BQ8NDV3 1235 aa23■■□□□ 1.27
AP003555.3-201ENST00000534086 TCERG1O14776 1098 aaKnown RBP22.99■■□□□ 1.27
AP003555.3-201ENST00000534086 HCLS1P14317 486 aaPredicted RBP22.99■■□□□ 1.27
AP003555.3-201ENST00000534086 IARSP41252 1262 aaKnown RBP22.99■■□□□ 1.27
AP003555.3-201ENST00000534086 PSMD1Q99460 953 aa22.99■■□□□ 1.27
AP003555.3-201ENST00000534086 WDR90Q96KV7 1748 aa22.99■■□□□ 1.27
AP003555.3-201ENST00000534086 PPEF1O14829 653 aaPredicted RBP22.98■■□□□ 1.27
AP003555.3-201ENST00000534086 GRIPAP1Q4V328 841 aa22.98■■□□□ 1.27
AP003555.3-201ENST00000534086 C8orf58Q8NAV2 365 aa22.98■■□□□ 1.27
AP003555.3-201ENST00000534086 SH3TC1Q8TE82 1336 aa22.98■■□□□ 1.27
AP003555.3-201ENST00000534086 CCDC27Q2M243 656 aa22.97■■□□□ 1.27
AP003555.3-201ENST00000534086 ZNF428Q96B54 188 aa22.97■■□□□ 1.27
AP003555.3-201ENST00000534086 ISCA1Q9BUE6 129 aa22.97■■□□□ 1.27
AP003555.3-201ENST00000534086 CHMP4AQ9BY43 222 aa22.97■■□□□ 1.27
AP003555.3-201ENST00000534086 TMX4Q9H1E5 349 aaPredicted RBP22.97■■□□□ 1.27
AP003555.3-201ENST00000534086 ATP5J2-PTCD1G3V325 749 aa22.96■■□□□ 1.27
AP003555.3-201ENST00000534086 SNED1Q8TER0 1413 aa22.96■■□□□ 1.27
AP003555.3-201ENST00000534086 GOLGA2Q08379 1002 aa22.95■■□□□ 1.26
AP003555.3-201ENST00000534086 RIC3Q7Z5B4 369 aa22.95■■□□□ 1.26
AP003555.3-201ENST00000534086 WWC1Q8IX03 1113 aa22.95■■□□□ 1.26
AP003555.3-201ENST00000534086 PHAXQ9H814 394 aaKnown RBP22.95■■□□□ 1.26
AP003555.3-201ENST00000534086 ABCC4O15439 1325 aa22.94■■□□□ 1.26
AP003555.3-201ENST00000534086 CCDC30Q5VVM6 783 aa22.94■■□□□ 1.26
AP003555.3-201ENST00000534086 JDP2Q8WYK2 163 aa22.94■■□□□ 1.26
AP003555.3-201ENST00000534086 BBOX1O75936 387 aa22.93■■□□□ 1.26
AP003555.3-201ENST00000534086 DDX46Q7L014 1031 aaKnown RBP22.93■■□□□ 1.26
AP003555.3-201ENST00000534086 TSPYL6Q8N831 410 aa22.93■■□□□ 1.26
AP003555.3-201ENST00000534086 TSR2Q969E8 191 aaKnown RBP22.93■■□□□ 1.26
AP003555.3-201ENST00000534086 FAM89AQ96GI7 184 aa22.93■■□□□ 1.26
AP003555.3-201ENST00000534086 ATP6V0A2Q9Y487 856 aa22.93■■□□□ 1.26
AP003555.3-201ENST00000534086 ZNF541Q9H0D2 1346 aa22.92■■□□□ 1.26
AP003555.3-201ENST00000534086 IQCA1LA6NCM1 817 aa22.92■■□□□ 1.26
AP003555.3-201ENST00000534086 FZD9O00144 591 aa22.92■■□□□ 1.26
AP003555.3-201ENST00000534086 TRIM28Q13263 835 aaKnown RBP22.92■■□□□ 1.26
AP003555.3-201ENST00000534086 NCBP3Q53F19 620 aaKnown RBP22.92■■□□□ 1.26
AP003555.3-201ENST00000534086 SLC51AQ86UW1 340 aa22.92■■□□□ 1.26
AP003555.3-201ENST00000534086 L3MBTL3Q96JM7 780 aaPredicted RBP22.92■■□□□ 1.26
AP003555.3-201ENST00000534086 LAMB2P55268 1798 aa22.91■■□□□ 1.26
AP003555.3-201ENST00000534086 DNAJC5GQ8N7S2 189 aa22.91■■□□□ 1.26
AP003555.3-201ENST00000534086 HTRA3P83110 453 aa22.9■■□□□ 1.26
AP003555.3-201ENST00000534086 RTL5Q5HYW3 569 aaPredicted RBP22.9■■□□□ 1.26
AP003555.3-201ENST00000534086 LARGE2Q8N3Y3 721 aa22.9■■□□□ 1.26
AP003555.3-201ENST00000534086 IL16Q14005 1332 aa22.89■■□□□ 1.26
AP003555.3-201ENST00000534086 GRAPQ13588 217 aa22.89■■□□□ 1.25
AP003555.3-201ENST00000534086 SP8Q8IXZ3 490 aa22.89■■□□□ 1.25
AP003555.3-201ENST00000534086 GRAPLQ8TC17 118 aaPredicted RBP22.89■■□□□ 1.25
AP003555.3-201ENST00000534086 DDX58O95786 925 aaKnown RBP22.88■■□□□ 1.25
AP003555.3-201ENST00000534086 EIF6P56537 245 aaKnown RBP22.88■■□□□ 1.25
AP003555.3-201ENST00000534086 MYD88Q99836 296 aa22.88■■□□□ 1.25
AP003555.3-201ENST00000534086 TAF1DQ9H5J8 278 aaPredicted RBP22.88■■□□□ 1.25
AP003555.3-201ENST00000534086 SALL2Q9Y467 1007 aaPredicted RBP22.88■■□□□ 1.25
AP003555.3-201ENST00000534086 IRS4O14654 1257 aaPredicted RBP22.87■■□□□ 1.25
AP003555.3-201ENST00000534086 SF3B3Q15393 1217 aaKnown RBP22.87■■□□□ 1.25
AP003555.3-201ENST00000534086 CHADLQ6NUI6 762 aa22.87■■□□□ 1.25
AP003555.3-201ENST00000534086 GPC2Q8N158 579 aa22.87■■□□□ 1.25
AP003555.3-201ENST00000534086 SUPT20HQ8NEM7 779 aa22.87■■□□□ 1.25
AP003555.3-201ENST00000534086 STK31Q9BXU1 1019 aa22.87■■□□□ 1.25
AP003555.3-201ENST00000534086 HACL1Q9UJ83 578 aa22.87■■□□□ 1.25
AP003555.3-201ENST00000534086 SCN4AP35499 1836 aa22.87■■□□□ 1.25
AP003555.3-201ENST00000534086 PPIP5K2O43314 1243 aa22.86■■□□□ 1.25
AP003555.3-201ENST00000534086 POTEIP0CG38 1075 aa22.86■■□□□ 1.25
AP003555.3-201ENST00000534086 POTEJP0CG39 1038 aa22.86■■□□□ 1.25
AP003555.3-201ENST00000534086 TWISTNBQ3B726 338 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms