RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ZC3H4Q9UPT8 1303 aaKnown RBP11.93□□□□□ -0.5
CHKA-207ENST00000533728 CEP290O15078 2479 aa11.93□□□□□ -0.5
CHKA-207ENST00000533728 GLTPD2A6NH11 291 aa11.93□□□□□ -0.5
CHKA-207ENST00000533728 MFAP1P55081 439 aaKnown RBP11.93□□□□□ -0.5
CHKA-207ENST00000533728 NBR1Q14596 966 aa11.93□□□□□ -0.5
CHKA-207ENST00000533728 USHBP1Q8N6Y0 703 aa11.93□□□□□ -0.5
CHKA-207ENST00000533728 IL27Q8NEV9 243 aa11.93□□□□□ -0.5
CHKA-207ENST00000533728 FLAD1Q8NFF5 587 aa11.93□□□□□ -0.5
CHKA-207ENST00000533728 TBC1D2Q9BYX2 928 aa11.93□□□□□ -0.5
CHKA-207ENST00000533728 A0A0G2JLW4 131 aa11.92□□□□□ -0.5
CHKA-207ENST00000533728 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
CHKA-207ENST00000533728 BTBD11A6QL63 1104 aa11.92□□□□□ -0.5
CHKA-207ENST00000533728 NFKBIBQ15653 356 aa11.92□□□□□ -0.5
CHKA-207ENST00000533728 SRCIN1Q9C0H9 1055 aa11.92□□□□□ -0.5
CHKA-207ENST00000533728 TSKSQ9UJT2 592 aa11.92□□□□□ -0.5
CHKA-207ENST00000533728 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
CHKA-207ENST00000533728 MEGF6O75095 1541 aa11.91□□□□□ -0.5
CHKA-207ENST00000533728 WDR33Q9C0J8 1336 aaKnown RBP11.91□□□□□ -0.5
CHKA-207ENST00000533728 F6X3S4 739 aa11.91□□□□□ -0.5
CHKA-207ENST00000533728 CSB-PGBD3P0DP91 1061 aa11.91□□□□□ -0.5
CHKA-207ENST00000533728 IL2RBP14784 551 aa11.91□□□□□ -0.5
CHKA-207ENST00000533728 TGFB2P61812 414 aa11.91□□□□□ -0.5
CHKA-207ENST00000533728 SLC4A10Q6U841 1118 aa11.91□□□□□ -0.5
CHKA-207ENST00000533728 TBC1D9Q6ZT07 1266 aa11.91□□□□□ -0.5
CHKA-207ENST00000533728 ANTXR1Q9H6X2 564 aa11.91□□□□□ -0.5
CHKA-207ENST00000533728 LGR6Q9HBX8 967 aa11.91□□□□□ -0.5
CHKA-207ENST00000533728 NLRP2Q9NX02 1062 aa11.91□□□□□ -0.5
CHKA-207ENST00000533728 DBF4Q9UBU7 674 aaPredicted RBP11.91□□□□□ -0.5
CHKA-207ENST00000533728 CCNL1Q9UK58 526 aaPredicted RBP11.91□□□□□ -0.5
CHKA-207ENST00000533728 AFDNP55196 1824 aaKnown RBP11.9□□□□□ -0.5
CHKA-207ENST00000533728 SALL3Q9BXA9 1300 aa11.9□□□□□ -0.5
CHKA-207ENST00000533728 EPB41L2O43491 1005 aaKnown RBP11.9□□□□□ -0.5
CHKA-207ENST00000533728 RAB11FIP3O75154 756 aa11.9□□□□□ -0.5
CHKA-207ENST00000533728 ALDH1L1O75891 902 aa11.9□□□□□ -0.5
CHKA-207ENST00000533728 SLC4A3P48751 1232 aa11.9□□□□□ -0.5
CHKA-207ENST00000533728 CASC1Q6TDU7 716 aa11.9□□□□□ -0.5
CHKA-207ENST00000533728 SSH3Q8TE77 659 aa11.9□□□□□ -0.5
CHKA-207ENST00000533728 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
CHKA-207ENST00000533728 THSD7BQ9C0I4 1608 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 PASKQ96RG2 1323 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 LTBP1Q14766 1721 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 RASSF10A6NK89 507 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 HSP90AB1P08238 724 aaKnown RBP11.89□□□□□ -0.51
CHKA-207ENST00000533728 UBTFL1P0CB47 393 aaPredicted RBP11.89□□□□□ -0.51
CHKA-207ENST00000533728 GSPT1P15170 499 aaKnown RBP11.89□□□□□ -0.51
CHKA-207ENST00000533728 TATP17735 454 aaPredicted RBP11.89□□□□□ -0.51
CHKA-207ENST00000533728 POLA2Q14181 598 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 DEFB115Q30KQ5 88 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 HSCBQ8IWL3 235 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 DNAAF4Q8WXU2 420 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 RAPGEF4Q8WZA2 1011 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 USP44Q9H0E7 712 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 HYPKQ9NX55 129 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 STAP2Q9UGK3 403 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 DOT1LQ8TEK3 1739 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 TOGARAM1Q9Y4F4 1720 aa11.89□□□□□ -0.51
CHKA-207ENST00000533728 DEKP35659 375 aaKnown RBP11.88□□□□□ -0.51
CHKA-207ENST00000533728 MTX1Q13505 466 aa11.88□□□□□ -0.51
CHKA-207ENST00000533728 HSP90AB4PQ58FF6 505 aa11.88□□□□□ -0.51
CHKA-207ENST00000533728 LRRCC1Q9C099 1032 aa11.88□□□□□ -0.51
CHKA-207ENST00000533728 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
CHKA-207ENST00000533728 CCDC88AQ3V6T2 1871 aa11.88□□□□□ -0.51
CHKA-207ENST00000533728 ARFGEF2Q9Y6D5 1785 aa11.87□□□□□ -0.51
CHKA-207ENST00000533728 KDM6AO15550 1401 aaPredicted RBP11.87□□□□□ -0.51
CHKA-207ENST00000533728 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
CHKA-207ENST00000533728 POTECB2RU33 542 aa11.87□□□□□ -0.51
CHKA-207ENST00000533728 PDE1AP54750 535 aa11.87□□□□□ -0.51
CHKA-207ENST00000533728 BEND3Q5T5X7 828 aa11.87□□□□□ -0.51
CHKA-207ENST00000533728 MPRIPQ6WCQ1 1025 aa11.87□□□□□ -0.51
CHKA-207ENST00000533728 SMIM5Q71RC9 77 aa11.87□□□□□ -0.51
CHKA-207ENST00000533728 REC8O95072 547 aa11.86□□□□□ -0.51
CHKA-207ENST00000533728 DPEP1P16444 411 aa11.86□□□□□ -0.51
CHKA-207ENST00000533728 MNX1P50219 401 aaPredicted RBP11.86□□□□□ -0.51
CHKA-207ENST00000533728 IFNL2Q8IZJ0 200 aa11.86□□□□□ -0.51
CHKA-207ENST00000533728 KIF2CQ99661 725 aa11.86□□□□□ -0.51
CHKA-207ENST00000533728 DDX21Q9NR30 783 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHKA-207ENST00000533728 CHMP5Q9NZZ3 219 aa11.86□□□□□ -0.51
CHKA-207ENST00000533728 CHPF2Q9P2E5 772 aa11.86□□□□□ -0.51
CHKA-207ENST00000533728 LRRFIP2Q9Y608 721 aaKnown RBP11.86□□□□□ -0.51
CHKA-207ENST00000533728 UTYO14607 1347 aa11.86□□□□□ -0.51
CHKA-207ENST00000533728 MKI67P46013 3256 aaKnown RBP11.85□□□□□ -0.51
CHKA-207ENST00000533728 DDX58O95786 925 aaKnown RBP11.85□□□□□ -0.51
CHKA-207ENST00000533728 PHKG2P15735 406 aa11.85□□□□□ -0.51
CHKA-207ENST00000533728 SDSP20132 328 aa11.85□□□□□ -0.51
CHKA-207ENST00000533728 RABEP1Q15276 862 aa11.85□□□□□ -0.51
CHKA-207ENST00000533728 KSR2Q6VAB6 950 aa11.85□□□□□ -0.51
CHKA-207ENST00000533728 DCAF5Q96JK2 942 aa11.85□□□□□ -0.51
CHKA-207ENST00000533728 PHAXQ9H814 394 aaKnown RBP11.85□□□□□ -0.51
CHKA-207ENST00000533728 SLC52A2Q9HAB3 445 aa11.85□□□□□ -0.51
CHKA-207ENST00000533728 TAF1LQ8IZX4 1826 aa11.85□□□□□ -0.51
CHKA-207ENST00000533728 COL15A1P39059 1388 aa11.84□□□□□ -0.51
CHKA-207ENST00000533728 KCNQ3O43525 872 aa11.84□□□□□ -0.51
CHKA-207ENST00000533728 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
CHKA-207ENST00000533728 POTEJP0CG39 1038 aa11.84□□□□□ -0.51
CHKA-207ENST00000533728 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
CHKA-207ENST00000533728 ZCRB1Q8TBF4 217 aaKnown RBP11.84□□□□□ -0.51
CHKA-207ENST00000533728 USP26Q9BXU7 913 aa11.84□□□□□ -0.51
CHKA-207ENST00000533728 ZNF831Q5JPB2 1677 aa11.84□□□□□ -0.51
CHKA-207ENST00000533728 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
CHKA-207ENST00000533728 PNMA6EA0A0J9YXQ4 647 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms