RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 TNNI2P48788 182 aa13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 RBM10P98175 930 aaKnown RBP13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 CCDC96Q2M329 555 aa13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 CCDC8Q9H0W5 538 aaPredicted RBP13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 CWC15Q9P013 229 aaKnown RBP13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 RTL1A6NKG5 1358 aa13.21□□□□□ -0.3
AMBRA1-211ENST00000533727 SH3TC1Q8TE82 1336 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 KIF5BP33176 963 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 STIM1Q13586 685 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 MBD3O95983 291 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 STK11IPQ8N1F8 1099 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 MNS1Q8NEH6 495 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 CARD14Q9BXL6 1004 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 PRIM1P49642 420 aaKnown RBP13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 PLBD2Q8NHP8 589 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 DNAI2Q9GZS0 605 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 ANKARQ7Z5J8 1434 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 H0YIN7 160 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 CCDC173Q0VFZ6 552 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 LMBR1LQ6UX01 489 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 HOOK2Q96ED9 719 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 CARD10Q9BWT7 1032 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 PRM3Q9NNZ6 103 aa13.2□□□□□ -0.3
AMBRA1-211ENST00000533727 KIF24Q5T7B8 1368 aa13.19□□□□□ -0.3
AMBRA1-211ENST00000533727 WDR33Q9C0J8 1336 aaKnown RBP13.19□□□□□ -0.3
AMBRA1-211ENST00000533727 IL13P35225 146 aa13.19□□□□□ -0.3
AMBRA1-211ENST00000533727 PTPRTO14522 1441 aa13.19□□□□□ -0.3
AMBRA1-211ENST00000533727 CATIPQ7Z7H3 387 aa13.19□□□□□ -0.3
AMBRA1-211ENST00000533727 KRI1Q8N9T8 703 aaKnown RBP13.19□□□□□ -0.3
AMBRA1-211ENST00000533727 ACBD3Q9H3P7 528 aa13.19□□□□□ -0.3
AMBRA1-211ENST00000533727 RANBP6O60518 1105 aaKnown RBP13.19□□□□□ -0.3
AMBRA1-211ENST00000533727 HSP90B2PQ58FF3 399 aa13.19□□□□□ -0.3
AMBRA1-211ENST00000533727 CERS3Q8IU89 383 aa13.19□□□□□ -0.3
AMBRA1-211ENST00000533727 PHAXQ9H814 394 aaKnown RBP13.19□□□□□ -0.3
AMBRA1-211ENST00000533727 MAST3O60307 1309 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 DACH1Q9UI36 760 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 INSRP06213 1382 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 METP08581 1390 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 ATP7BP35670 1465 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 B4DLN1 442 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 OFD1O75665 1012 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 ANXA1P04083 346 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 MRPL12P52815 198 aaKnown RBP13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 CCDC191Q8NCU4 936 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 MAGEC2Q9UBF1 373 aaPredicted RBP13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 ERBB4Q15303 1308 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 ADCY10Q96PN6 1610 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 PPP4R3AQ6IN85 833 aa13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 NSFL1CQ9UNZ2 370 aaKnown RBP13.18□□□□□ -0.3
AMBRA1-211ENST00000533727 ZNF335Q9H4Z2 1342 aaPredicted RBP13.17□□□□□ -0.3
AMBRA1-211ENST00000533727 TRIM21P19474 475 aaKnown RBP13.17□□□□□ -0.3
AMBRA1-211ENST00000533727 CT47A1Q5JQC4 288 aaPredicted RBP13.17□□□□□ -0.3
AMBRA1-211ENST00000533727 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
AMBRA1-211ENST00000533727 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
AMBRA1-211ENST00000533727 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
AMBRA1-211ENST00000533727 TET3O43151 1660 aa13.17□□□□□ -0.3
AMBRA1-211ENST00000533727 ABCA9Q8IUA7 1624 aa13.17□□□□□ -0.3
AMBRA1-211ENST00000533727 GOLIM4O00461 696 aa13.17□□□□□ -0.3
AMBRA1-211ENST00000533727 ALDH1B1P30837 517 aa13.17□□□□□ -0.3
AMBRA1-211ENST00000533727 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
AMBRA1-211ENST00000533727 EIF6P56537 245 aaKnown RBP13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 HMG20BQ9P0W2 317 aa13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 CFAP45Q9UL16 551 aa13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 GNAT2P19087 354 aa13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 FILIP1LQ4L180 1135 aa13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 NAA16Q6N069 864 aaPredicted RBP13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 SH2B1Q9NRF2 756 aaPredicted RBP13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 KRT85P78386 507 aa13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 ODF2Q5BJF6 829 aa13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 SLC12A7Q9Y666 1083 aa13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 RNF214Q8ND24 703 aa13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 RHPN1Q8TCX5 695 aa13.16□□□□□ -0.3
AMBRA1-211ENST00000533727 LARP1BQ659C4 914 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-211ENST00000533727 ESPNB1AK53 854 aa13.15□□□□□ -0.3
AMBRA1-211ENST00000533727 PATL2C9JE40 543 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-211ENST00000533727 ATP8B2P98198 1209 aa13.15□□□□□ -0.3
AMBRA1-211ENST00000533727 SYNMO15061 1565 aa13.15□□□□□ -0.3
AMBRA1-211ENST00000533727 MAP3K4Q9Y6R4 1608 aa13.15□□□□□ -0.3
AMBRA1-211ENST00000533727 TSPY2A6NKD2 308 aa13.15□□□□□ -0.3
AMBRA1-211ENST00000533727 PDE8AO60658 829 aa13.15□□□□□ -0.3
AMBRA1-211ENST00000533727 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-211ENST00000533727 KAT14Q9H8E8 782 aa13.15□□□□□ -0.3
AMBRA1-211ENST00000533727 CNNM2Q9H8M5 875 aa13.15□□□□□ -0.3
AMBRA1-211ENST00000533727 IFIT3O14879 490 aaKnown RBP13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 CYP7A1P22680 504 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 MFSD6Q6ZSS7 791 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 TMTC2Q8N394 836 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 DDX17Q92841 729 aaKnown RBP13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 KRT23Q9C075 422 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 STK3Q13188 491 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 UNC5CLQ8IV45 518 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 C8orf58Q8NAV2 365 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 DENND2AQ9ULE3 1009 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 AATKQ6ZMQ8 1374 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 KIF1BO60333 1816 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 KDM4AO75164 1064 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms