RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 MAP3K5Q99683 1374 aa20.42■□□□□ 0.86
PHRF1-205ENST00000533464 HOXC9P31274 260 aa20.41■□□□□ 0.86
PHRF1-205ENST00000533464 ZNF76P36508 570 aa20.41■□□□□ 0.86
PHRF1-205ENST00000533464 ZSCAN22P10073 491 aaPredicted RBP20.41■□□□□ 0.86
PHRF1-205ENST00000533464 CATIPQ7Z7H3 387 aa20.41■□□□□ 0.86
PHRF1-205ENST00000533464 KIF21AQ7Z4S6 1674 aa20.41■□□□□ 0.86
PHRF1-205ENST00000533464 EPB41L2O43491 1005 aaKnown RBP20.4■□□□□ 0.86
PHRF1-205ENST00000533464 IL13P35225 146 aa20.4■□□□□ 0.86
PHRF1-205ENST00000533464 PHAXQ9H814 394 aaKnown RBP20.4■□□□□ 0.86
PHRF1-205ENST00000533464 CNNM3Q8NE01 707 aa20.4■□□□□ 0.86
PHRF1-205ENST00000533464 TMOD2Q9NZR1 351 aa20.4■□□□□ 0.86
PHRF1-205ENST00000533464 CLIP2Q9UDT6 1046 aa20.4■□□□□ 0.86
PHRF1-205ENST00000533464 TBX22Q9Y458 520 aa20.4■□□□□ 0.86
PHRF1-205ENST00000533464 CRACR2BQ8N4Y2 399 aaPredicted RBP20.4■□□□□ 0.86
PHRF1-205ENST00000533464 BIN1O00499 593 aa20.39■□□□□ 0.85
PHRF1-205ENST00000533464 IL15P40933 162 aaPredicted RBP20.39■□□□□ 0.85
PHRF1-205ENST00000533464 METAP2P50579 478 aaKnown RBP eCLIP20.39■□□□□ 0.851e-7■□□□□ 11.3
PHRF1-205ENST00000533464 ATP2B3Q16720 1220 aa20.39■□□□□ 0.85
PHRF1-205ENST00000533464 ARHGAP29Q52LW3 1261 aa20.39■□□□□ 0.85
PHRF1-205ENST00000533464 MFSD6Q6ZSS7 791 aa20.39■□□□□ 0.85
PHRF1-205ENST00000533464 G2E3Q7L622 706 aa20.39■□□□□ 0.85
PHRF1-205ENST00000533464 TRIM35Q9UPQ4 493 aa20.39■□□□□ 0.85
PHRF1-205ENST00000533464 MCM5P33992 734 aa20.39■□□□□ 0.85
PHRF1-205ENST00000533464 ZSCAN23Q3MJ62 389 aa20.39■□□□□ 0.85
PHRF1-205ENST00000533464 RPGRQ92834 1020 aaKnown RBP20.39■□□□□ 0.85
PHRF1-205ENST00000533464 PATL2C9JE40 543 aaKnown RBP20.39■□□□□ 0.85
PHRF1-205ENST00000533464 UQCRFS1P1P0C7P4 283 aa20.39■□□□□ 0.85
PHRF1-205ENST00000533464 CCDC181Q5TID7 509 aa20.39■□□□□ 0.85
PHRF1-205ENST00000533464 NLRP5P59047 1200 aa20.38■□□□□ 0.85
PHRF1-205ENST00000533464 C19orf44Q9H6X5 657 aa20.38■□□□□ 0.85
PHRF1-205ENST00000533464 MCMDC2Q4G0Z9 681 aa20.38■□□□□ 0.85
PHRF1-205ENST00000533464 ZNF165P49910 485 aa20.38■□□□□ 0.85
PHRF1-205ENST00000533464 PTPN14Q15678 1187 aa20.38■□□□□ 0.85
PHRF1-205ENST00000533464 IP6K1Q92551 441 aa20.38■□□□□ 0.85
PHRF1-205ENST00000533464 PDCL3Q9H2J4 239 aa20.38■□□□□ 0.85
PHRF1-205ENST00000533464 ZFYP08048 801 aaPredicted RBP20.37■□□□□ 0.85
PHRF1-205ENST00000533464 KLF18A0A0U1RQI7 1052 aa20.37■□□□□ 0.85
PHRF1-205ENST00000533464 CCDC194A0A1B0GVG4 234 aa20.37■□□□□ 0.85
PHRF1-205ENST00000533464 SKIDA1Q1XH10 827 aa20.37■□□□□ 0.85
PHRF1-205ENST00000533464 MYO6Q9UM54 1294 aa20.37■□□□□ 0.85
PHRF1-205ENST00000533464 SOS1Q07889 1333 aaPredicted RBP20.37■□□□□ 0.85
PHRF1-205ENST00000533464 MAST1Q9Y2H9 1570 aa20.37■□□□□ 0.85
PHRF1-205ENST00000533464 HMGB2P26583 209 aaKnown RBP20.37■□□□□ 0.85
PHRF1-205ENST00000533464 PANK2Q9BZ23 570 aa20.37■□□□□ 0.85
PHRF1-205ENST00000533464 HCLS1P14317 486 aaPredicted RBP20.36■□□□□ 0.85
PHRF1-205ENST00000533464 NMIQ13287 307 aaPredicted RBP20.36■□□□□ 0.85
PHRF1-205ENST00000533464 AXDND1Q5T1B0 1012 aaPredicted RBP20.36■□□□□ 0.85
PHRF1-205ENST00000533464 TTC41PQ6P2S7 1318 aa20.36■□□□□ 0.85
PHRF1-205ENST00000533464 C6orf229H3BNL8 230 aa20.36■□□□□ 0.85
PHRF1-205ENST00000533464 ADCY5O95622 1261 aa20.36■□□□□ 0.85
PHRF1-205ENST00000533464 GIMAP6Q6P9H5 292 aa20.36■□□□□ 0.85
PHRF1-205ENST00000533464 TXLNBQ8N3L3 684 aa20.36■□□□□ 0.85
PHRF1-205ENST00000533464 TOP1P11387 765 aaKnown RBP20.36■□□□□ 0.85
PHRF1-205ENST00000533464 ZSCAN16Q9H4T2 348 aaPredicted RBP20.36■□□□□ 0.85
PHRF1-205ENST00000533464 SLC26A6Q9BXS9 759 aa20.36■□□□□ 0.85
PHRF1-205ENST00000533464 CNPY2Q9Y2B0 182 aa20.35■□□□□ 0.85
PHRF1-205ENST00000533464 CCDC152Q4G0S7 254 aa20.35■□□□□ 0.85
PHRF1-205ENST00000533464 TRPM2O94759 1503 aa20.35■□□□□ 0.85
PHRF1-205ENST00000533464 ATP7AQ04656 1500 aa20.34■□□□□ 0.85
PHRF1-205ENST00000533464 RNMTO43148 476 aaKnown RBP20.34■□□□□ 0.85
PHRF1-205ENST00000533464 UBXN4Q92575 508 aa20.34■□□□□ 0.85
PHRF1-205ENST00000533464 TSPY2A6NKD2 308 aa20.34■□□□□ 0.85
PHRF1-205ENST00000533464 MAGI3Q5TCQ9 1506 aa20.34■□□□□ 0.85
PHRF1-205ENST00000533464 CHMLP26374 656 aa20.34■□□□□ 0.85
PHRF1-205ENST00000533464 STX1AQ16623 288 aa20.34■□□□□ 0.85
PHRF1-205ENST00000533464 IQSEC3Q9UPP2 1182 aaPredicted RBP20.34■□□□□ 0.85
PHRF1-205ENST00000533464 SAMD9Q5K651 1589 aa20.33■□□□□ 0.85
PHRF1-205ENST00000533464 ERLIN1O75477 346 aa20.33■□□□□ 0.85
PHRF1-205ENST00000533464 KIAA1328Q86T90 577 aa20.33■□□□□ 0.85
PHRF1-205ENST00000533464 USP48Q86UV5 1035 aa20.33■□□□□ 0.85
PHRF1-205ENST00000533464 CCDC96Q2M329 555 aa20.33■□□□□ 0.85
PHRF1-205ENST00000533464 DCAF5Q96JK2 942 aa20.33■□□□□ 0.85
PHRF1-205ENST00000533464 ABCA5Q8WWZ7 1642 aa20.33■□□□□ 0.85
PHRF1-205ENST00000533464 KIF2AO00139 706 aaPredicted RBP20.33■□□□□ 0.84
PHRF1-205ENST00000533464 Q6ZUG5 572 aa20.33■□□□□ 0.84
PHRF1-205ENST00000533464 CHL1O00533 1208 aa20.33■□□□□ 0.84
PHRF1-205ENST00000533464 EDC4Q6P2E9 1401 aaKnown RBP20.33■□□□□ 0.84
PHRF1-205ENST00000533464 LRSAM1Q6UWE0 723 aa20.33■□□□□ 0.84
PHRF1-205ENST00000533464 PTPRTO14522 1441 aa20.32■□□□□ 0.84
PHRF1-205ENST00000533464 LDHCP07864 332 aa20.32■□□□□ 0.84
PHRF1-205ENST00000533464 IL2RBP14784 551 aa20.32■□□□□ 0.84
PHRF1-205ENST00000533464 SLC9C2Q5TAH2 1124 aa20.32■□□□□ 0.84
PHRF1-205ENST00000533464 ACSBG1Q96GR2 724 aa20.32■□□□□ 0.84
PHRF1-205ENST00000533464 PAG1Q9NWQ8 432 aa20.32■□□□□ 0.84
PHRF1-205ENST00000533464 PDE4BQ07343 736 aa20.32■□□□□ 0.84
PHRF1-205ENST00000533464 SLF2Q8IX21 1173 aa20.32■□□□□ 0.84
PHRF1-205ENST00000533464 OTUD7AQ8TE49 926 aaPredicted RBP20.32■□□□□ 0.84
PHRF1-205ENST00000533464 USP26Q9BXU7 913 aa20.32■□□□□ 0.84
PHRF1-205ENST00000533464 ZSCAN12O43309 604 aa20.31■□□□□ 0.84
PHRF1-205ENST00000533464 ZGPATQ8N5A5 531 aaKnown RBP20.31■□□□□ 0.84
PHRF1-205ENST00000533464 DDX21Q9NR30 783 aaKnown RBP eCLIP20.31■□□□□ 0.84
PHRF1-205ENST00000533464 SLC4A8Q2Y0W8 1093 aa20.31■□□□□ 0.84
PHRF1-205ENST00000533464 NBPF6Q5VWK0 638 aa20.31■□□□□ 0.84
PHRF1-205ENST00000533464 ISM2Q6H9L7 571 aa20.31■□□□□ 0.84
PHRF1-205ENST00000533464 NBPF5PQ86XG9 351 aaPredicted RBP20.31■□□□□ 0.84
PHRF1-205ENST00000533464 KIF18AQ8NI77 898 aa20.31■□□□□ 0.84
PHRF1-205ENST00000533464 NBPF4Q96M43 638 aa20.31■□□□□ 0.84
PHRF1-205ENST00000533464 KIF5BP33176 963 aa20.31■□□□□ 0.84
PHRF1-205ENST00000533464 ATP6V1AP38606 617 aa20.31■□□□□ 0.84
PHRF1-205ENST00000533464 SEPT11Q9NVA2 429 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms