RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TCERG1O14776 1098 aaKnown RBP26.29■■□□□ 1.8
CCS-208ENST00000533244 SLFN5Q08AF3 891 aa26.29■■□□□ 1.8
CCS-208ENST00000533244 MASTLQ96GX5 879 aa26.29■■□□□ 1.8
CCS-208ENST00000533244 UTP14AQ9BVJ6 771 aaKnown RBP26.29■■□□□ 1.8
CCS-208ENST00000533244 TRIM28Q13263 835 aaKnown RBP26.28■■□□□ 1.8
CCS-208ENST00000533244 SLC4A2P04920 1241 aa26.27■■□□□ 1.8
CCS-208ENST00000533244 CRY2Q49AN0 593 aa26.27■■□□□ 1.8
CCS-208ENST00000533244 RIC3Q7Z5B4 369 aa26.27■■□□□ 1.8
CCS-208ENST00000533244 DDX58O95786 925 aaKnown RBP26.26■■□□□ 1.79
CCS-208ENST00000533244 SLC10A5Q5PT55 438 aa26.26■■□□□ 1.79
CCS-208ENST00000533244 G2E3Q7L622 706 aa26.26■■□□□ 1.79
CCS-208ENST00000533244 TRMT2AQ8IZ69 625 aaKnown RBP26.26■■□□□ 1.79
CCS-208ENST00000533244 ZNF622Q969S3 477 aaKnown RBP eCLIP26.26■■□□□ 1.798e-7■□□□□ 10.2
CCS-208ENST00000533244 NPR1P16066 1061 aa26.25■■□□□ 1.79
CCS-208ENST00000533244 CNKSR1Q969H4 720 aa26.25■■□□□ 1.79
CCS-208ENST00000533244 ADCY9O60503 1353 aa26.25■■□□□ 1.79
CCS-208ENST00000533244 CDCA7LQ96GN5 454 aa26.24■■□□□ 1.79
CCS-208ENST00000533244 SLX4Q8IY92 1834 aa26.24■■□□□ 1.79
CCS-208ENST00000533244 ATP5J2-PTCD1G3V325 749 aa26.23■■□□□ 1.79
CCS-208ENST00000533244 KSR2Q6VAB6 950 aa26.23■■□□□ 1.79
CCS-208ENST00000533244 SH3TC1Q8TE82 1336 aa26.23■■□□□ 1.79
CCS-208ENST00000533244 FLIIQ13045 1269 aa26.22■■□□□ 1.79
CCS-208ENST00000533244 ARHGAP27Q6ZUM4 889 aa26.22■■□□□ 1.79
CCS-208ENST00000533244 METTL22Q9BUU2 404 aaPredicted RBP26.22■■□□□ 1.79
CCS-208ENST00000533244 TRMT112Q9UI30 125 aaKnown RBP26.22■■□□□ 1.79
CCS-208ENST00000533244 CACNA1SQ13698 1873 aa26.22■■□□□ 1.79
CCS-208ENST00000533244 PI4KAP2A4QPH2 592 aa26.22■■□□□ 1.79
CCS-208ENST00000533244 PI4KAP1Q8N8J0 262 aa26.22■■□□□ 1.79
CCS-208ENST00000533244 MAP3K2Q9Y2U5 619 aa26.22■■□□□ 1.79
CCS-208ENST00000533244 PRPF40BQ6NWY9 871 aaKnown RBP26.21■■□□□ 1.79
CCS-208ENST00000533244 C3orf67Q6ZVT6 689 aa26.21■■□□□ 1.79
CCS-208ENST00000533244 MYD88Q99836 296 aa26.21■■□□□ 1.79
CCS-208ENST00000533244 LAMB2P55268 1798 aa26.2■■□□□ 1.79
CCS-208ENST00000533244 DDX60Q8IY21 1712 aaKnown RBP26.2■■□□□ 1.79
CCS-208ENST00000533244 HOXA10P31260 410 aaPredicted RBP26.2■■□□□ 1.78
CCS-208ENST00000533244 SYNE4Q8N205 404 aa26.2■■□□□ 1.78
CCS-208ENST00000533244 CCDC191Q8NCU4 936 aa26.19■■□□□ 1.78
CCS-208ENST00000533244 C7orf43Q8WVR3 580 aa26.19■■□□□ 1.78
CCS-208ENST00000533244 NLRP3Q96P20 1036 aa26.18■■□□□ 1.78
CCS-208ENST00000533244 FER1L6Q2WGJ9 1857 aa26.17■■□□□ 1.78
CCS-208ENST00000533244 C21orf2O43822 256 aa26.16■■□□□ 1.78
CCS-208ENST00000533244 IGKV5-2P06315 115 aa26.16■■□□□ 1.78
CCS-208ENST00000533244 HCLS1P14317 486 aaPredicted RBP26.16■■□□□ 1.78
CCS-208ENST00000533244 ALDH1B1P30837 517 aa26.16■■□□□ 1.78
CCS-208ENST00000533244 FAM89AQ96GI7 184 aa26.16■■□□□ 1.78
CCS-208ENST00000533244 SBF1O95248 1867 aa26.16■■□□□ 1.78
CCS-208ENST00000533244 FKBP5Q13451 457 aaPredicted RBP26.15■■□□□ 1.78
CCS-208ENST00000533244 ZBTB38Q8NAP3 1195 aaPredicted RBP26.15■■□□□ 1.78
CCS-208ENST00000533244 ZNF428Q96B54 188 aa26.15■■□□□ 1.78
CCS-208ENST00000533244 NFKBIEO00221 500 aa26.14■■□□□ 1.78
CCS-208ENST00000533244 RPGRQ92834 1020 aaKnown RBP26.14■■□□□ 1.78
CCS-208ENST00000533244 CRAMP1Q96RY5 1269 aa26.14■■□□□ 1.78
CCS-208ENST00000533244 CWC25Q9NXE8 425 aaPredicted RBP26.14■■□□□ 1.78
CCS-208ENST00000533244 ZNF784Q8NCA9 323 aaPredicted RBP26.14■■□□□ 1.77
CCS-208ENST00000533244 PCCAP05165 728 aaPredicted RBP26.13■■□□□ 1.77
CCS-208ENST00000533244 RASSF7Q02833 373 aa26.13■■□□□ 1.77
CCS-208ENST00000533244 NEXNQ0ZGT2 675 aa26.13■■□□□ 1.77
CCS-208ENST00000533244 SOGA3Q5TF21 947 aa26.13■■□□□ 1.77
CCS-208ENST00000533244 DNAAF4Q8WXU2 420 aa26.13■■□□□ 1.77
CCS-208ENST00000533244 RBM17Q96I25 401 aaKnown RBP26.13■■□□□ 1.77
CCS-208ENST00000533244 ZNF219Q9P2Y4 722 aaPredicted RBP26.13■■□□□ 1.77
CCS-208ENST00000533244 SNED1Q8TER0 1413 aa26.12■■□□□ 1.77
CCS-208ENST00000533244 HNRNPUQ00839 825 aaKnown RBP eCLIP26.12■■□□□ 1.77
CCS-208ENST00000533244 LTBP3Q9NS15 1303 aa26.11■■□□□ 1.77
CCS-208ENST00000533244 NEURL1BA8MQ27 555 aa26.11■■□□□ 1.77
CCS-208ENST00000533244 CT47B1P0C2W7 299 aaPredicted RBP26.11■■□□□ 1.77
CCS-208ENST00000533244 PRELPP51888 382 aa26.11■■□□□ 1.77
CCS-208ENST00000533244 IRS4O14654 1257 aaPredicted RBP26.1■■□□□ 1.77
CCS-208ENST00000533244 SF3B3Q15393 1217 aaKnown RBP26.1■■□□□ 1.77
CCS-208ENST00000533244 CWF19L2Q2TBE0 894 aaKnown RBP26.1■■□□□ 1.77
CCS-208ENST00000533244 C9orf131Q5VYM1 1079 aa26.1■■□□□ 1.77
CCS-208ENST00000533244 MRPL50Q8N5N7 158 aaKnown RBP26.1■■□□□ 1.77
CCS-208ENST00000533244 CCDC93Q567U6 631 aa26.09■■□□□ 1.77
CCS-208ENST00000533244 RTL5Q5HYW3 569 aaPredicted RBP26.09■■□□□ 1.77
CCS-208ENST00000533244 LINS1Q8NG48 757 aa26.09■■□□□ 1.77
CCS-208ENST00000533244 SSH1Q8WYL5 1049 aa26.09■■□□□ 1.77
CCS-208ENST00000533244 ABCC4O15439 1325 aa26.09■■□□□ 1.77
CCS-208ENST00000533244 CDHR2Q9BYE9 1310 aa26.09■■□□□ 1.77
CCS-208ENST00000533244 ALDH1L2Q3SY69 923 aa26.08■■□□□ 1.77
CCS-208ENST00000533244 LMNB1P20700 586 aa26.07■■□□□ 1.76
CCS-208ENST00000533244 F6X3S4 739 aa26.06■■□□□ 1.76
CCS-208ENST00000533244 HSP90B1P14625 803 aaKnown RBP26.06■■□□□ 1.76
CCS-208ENST00000533244 OLFM4Q6UX06 510 aa26.06■■□□□ 1.76
CCS-208ENST00000533244 RNF181Q9P0P0 153 aa26.06■■□□□ 1.76
CCS-208ENST00000533244 GCKRQ14397 625 aa26.05■■□□□ 1.76
CCS-208ENST00000533244 CC2D2BQ6DHV5 1058 aa26.05■■□□□ 1.76
CCS-208ENST00000533244 TAOK3Q9H2K8 898 aa26.05■■□□□ 1.76
CCS-208ENST00000533244 CCDC88AQ3V6T2 1871 aa26.05■■□□□ 1.76
CCS-208ENST00000533244 H7C1W4 665 aa26.05■■□□□ 1.76
CCS-208ENST00000533244 PPEF1O14829 653 aaPredicted RBP26.05■■□□□ 1.76
CCS-208ENST00000533244 BEND3Q5T5X7 828 aa26.05■■□□□ 1.76
CCS-208ENST00000533244 DDX46Q7L014 1031 aaKnown RBP26.05■■□□□ 1.76
CCS-208ENST00000533244 ZBED9Q6R2W3 1325 aa26.04■■□□□ 1.76
CCS-208ENST00000533244 PDE8AO60658 829 aa26.04■■□□□ 1.76
CCS-208ENST00000533244 GRAPQ13588 217 aa26.04■■□□□ 1.76
CCS-208ENST00000533244 RTKN2Q8IZC4 609 aa26.04■■□□□ 1.76
CCS-208ENST00000533244 GRAPLQ8TC17 118 aaPredicted RBP26.04■■□□□ 1.76
CCS-208ENST00000533244 JARID2Q92833 1246 aaPredicted RBP26.04■■□□□ 1.76
CCS-208ENST00000533244 ZC3H4Q9UPT8 1303 aaKnown RBP26.04■■□□□ 1.76
CCS-208ENST00000533244 DICER1Q9UPY3 1922 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms