RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 OLFM4Q6UX06 510 aa20.58■□□□□ 0.89
LDLRAD3-205ENST00000532490 PPP1R42Q7Z4L9 355 aa20.58■□□□□ 0.89
LDLRAD3-205ENST00000532490 ANKRD36CQ5JPF3 1778 aa20.58■□□□□ 0.89
LDLRAD3-205ENST00000532490 GNAI1P63096 354 aa20.57■□□□□ 0.88
LDLRAD3-205ENST00000532490 SLC10A5Q5PT55 438 aa20.57■□□□□ 0.88
LDLRAD3-205ENST00000532490 C3orf67Q6ZVT6 689 aa20.57■□□□□ 0.88
LDLRAD3-205ENST00000532490 RBM46Q8TBY0 533 aaKnown RBP20.57■□□□□ 0.88
LDLRAD3-205ENST00000532490 SNED1Q8TER0 1413 aa20.57■□□□□ 0.88
LDLRAD3-205ENST00000532490 CALD1Q05682 793 aaKnown RBP20.56■□□□□ 0.88
LDLRAD3-205ENST00000532490 TCIRG1Q13488 830 aa20.56■□□□□ 0.88
LDLRAD3-205ENST00000532490 HSP90AB3PQ58FF7 597 aa20.56■□□□□ 0.88
LDLRAD3-205ENST00000532490 UTP14AQ9BVJ6 771 aaKnown RBP20.56■□□□□ 0.88
LDLRAD3-205ENST00000532490 DBF4Q9UBU7 674 aaPredicted RBP20.56■□□□□ 0.88
LDLRAD3-205ENST00000532490 POTECB2RU33 542 aa20.55■□□□□ 0.88
LDLRAD3-205ENST00000532490 NLRP10Q86W26 655 aa20.55■□□□□ 0.88
LDLRAD3-205ENST00000532490 FKBP4Q02790 459 aaKnown RBP eCLIP20.54■□□□□ 0.88
LDLRAD3-205ENST00000532490 RTKN2Q8IZC4 609 aa20.54■□□□□ 0.88
LDLRAD3-205ENST00000532490 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
LDLRAD3-205ENST00000532490 WDR90Q96KV7 1748 aa20.53■□□□□ 0.88
LDLRAD3-205ENST00000532490 C16orf71Q8IYS4 520 aaPredicted RBP20.53■□□□□ 0.88
LDLRAD3-205ENST00000532490 PLBD2Q8NHP8 589 aa20.53■□□□□ 0.88
LDLRAD3-205ENST00000532490 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
LDLRAD3-205ENST00000532490 CRAMP1Q96RY5 1269 aa20.53■□□□□ 0.88
LDLRAD3-205ENST00000532490 HYPKQ9NX55 129 aa20.53■□□□□ 0.88
LDLRAD3-205ENST00000532490 ANP32CO43423 234 aa20.52■□□□□ 0.88
LDLRAD3-205ENST00000532490 VEGFAP15692 232 aaPredicted RBP20.52■□□□□ 0.88
LDLRAD3-205ENST00000532490 CCDC27Q2M243 656 aa20.52■□□□□ 0.88
LDLRAD3-205ENST00000532490 DPY19L2Q6NUT2 758 aa20.52■□□□□ 0.88
LDLRAD3-205ENST00000532490 ANKRD13DQ6ZTN6 518 aa20.52■□□□□ 0.88
LDLRAD3-205ENST00000532490 SYNE4Q8N205 404 aa20.52■□□□□ 0.88
LDLRAD3-205ENST00000532490 C8orf58Q8NAV2 365 aa20.52■□□□□ 0.88
LDLRAD3-205ENST00000532490 NLRP3Q96P20 1036 aa20.52■□□□□ 0.88
LDLRAD3-205ENST00000532490 FSTL1Q12841 308 aa20.51■□□□□ 0.87
LDLRAD3-205ENST00000532490 RBM17Q96I25 401 aaKnown RBP20.51■□□□□ 0.87
LDLRAD3-205ENST00000532490 ISCA1Q9BUE6 129 aa20.51■□□□□ 0.87
LDLRAD3-205ENST00000532490 MRS2Q9HD23 443 aa20.51■□□□□ 0.87
LDLRAD3-205ENST00000532490 ZNF277Q9NRM2 450 aaPredicted RBP20.51■□□□□ 0.87
LDLRAD3-205ENST00000532490 ELL2O00472 640 aaPredicted RBP20.5■□□□□ 0.87
LDLRAD3-205ENST00000532490 NCBP3Q53F19 620 aaKnown RBP20.5■□□□□ 0.87
LDLRAD3-205ENST00000532490 CC2D2BQ6DHV5 1058 aa20.5■□□□□ 0.87
LDLRAD3-205ENST00000532490 PSMD1Q99460 953 aa20.5■□□□□ 0.87
LDLRAD3-205ENST00000532490 LAMB2P55268 1798 aa20.49■□□□□ 0.87
LDLRAD3-205ENST00000532490 SLC51AQ86UW1 340 aa20.49■□□□□ 0.87
LDLRAD3-205ENST00000532490 WWC1Q8IX03 1113 aa20.49■□□□□ 0.87
LDLRAD3-205ENST00000532490 TRMT112Q9UI30 125 aaKnown RBP20.49■□□□□ 0.87
LDLRAD3-205ENST00000532490 DDNO94850 711 aaPredicted RBP20.48■□□□□ 0.87
LDLRAD3-205ENST00000532490 HCLS1P14317 486 aaPredicted RBP20.48■□□□□ 0.87
LDLRAD3-205ENST00000532490 APLP1P51693 650 aa20.48■□□□□ 0.87
LDLRAD3-205ENST00000532490 PHAXQ9H814 394 aaKnown RBP20.48■□□□□ 0.87
LDLRAD3-205ENST00000532490 SH3TC1Q8TE82 1336 aa20.48■□□□□ 0.87
LDLRAD3-205ENST00000532490 PPEF1O14829 653 aaPredicted RBP20.47■□□□□ 0.87
LDLRAD3-205ENST00000532490 IARSP41252 1262 aaKnown RBP20.47■□□□□ 0.87
LDLRAD3-205ENST00000532490 TSPYL6Q8N831 410 aa20.47■□□□□ 0.87
LDLRAD3-205ENST00000532490 TRIM28Q13263 835 aaKnown RBP20.46■□□□□ 0.87
LDLRAD3-205ENST00000532490 GRIPAP1Q4V328 841 aa20.46■□□□□ 0.87
LDLRAD3-205ENST00000532490 SMC1BQ8NDV3 1235 aa20.46■□□□□ 0.87
LDLRAD3-205ENST00000532490 TSR2Q969E8 191 aaKnown RBP20.46■□□□□ 0.87
LDLRAD3-205ENST00000532490 ABCC4O15439 1325 aa20.46■□□□□ 0.87
LDLRAD3-205ENST00000532490 ATP5J2-PTCD1G3V325 749 aa20.45■□□□□ 0.86
LDLRAD3-205ENST00000532490 FZD9O00144 591 aa20.45■□□□□ 0.86
LDLRAD3-205ENST00000532490 ZNF428Q96B54 188 aa20.45■□□□□ 0.86
LDLRAD3-205ENST00000532490 COL4A5P29400 1685 aa20.45■□□□□ 0.86
LDLRAD3-205ENST00000532490 DDX60Q8IY21 1712 aaKnown RBP20.44■□□□□ 0.86
LDLRAD3-205ENST00000532490 DNAJC5GQ8N7S2 189 aa20.44■□□□□ 0.86
LDLRAD3-205ENST00000532490 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
LDLRAD3-205ENST00000532490 ATP6V0A2Q9Y487 856 aa20.44■□□□□ 0.86
LDLRAD3-205ENST00000532490 IL16Q14005 1332 aa20.44■□□□□ 0.86
LDLRAD3-205ENST00000532490 ZNF541Q9H0D2 1346 aa20.44■□□□□ 0.86
LDLRAD3-205ENST00000532490 TCERG1O14776 1098 aaKnown RBP20.43■□□□□ 0.86
LDLRAD3-205ENST00000532490 CCDC30Q5VVM6 783 aa20.43■□□□□ 0.86
LDLRAD3-205ENST00000532490 FAM89AQ96GI7 184 aa20.43■□□□□ 0.86
LDLRAD3-205ENST00000532490 BBOX1O75936 387 aa20.42■□□□□ 0.86
LDLRAD3-205ENST00000532490 RIC3Q7Z5B4 369 aa20.42■□□□□ 0.86
LDLRAD3-205ENST00000532490 CHMP4AQ9BY43 222 aa20.42■□□□□ 0.86
LDLRAD3-205ENST00000532490 TAF1P21675 1872 aa20.41■□□□□ 0.86
LDLRAD3-205ENST00000532490 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
LDLRAD3-205ENST00000532490 SP8Q8IXZ3 490 aa20.41■□□□□ 0.86
LDLRAD3-205ENST00000532490 SCN4AP35499 1836 aa20.41■□□□□ 0.86
LDLRAD3-205ENST00000532490 GRAPQ13588 217 aa20.4■□□□□ 0.86
LDLRAD3-205ENST00000532490 SF3B3Q15393 1217 aaKnown RBP20.4■□□□□ 0.86
LDLRAD3-205ENST00000532490 DDX46Q7L014 1031 aaKnown RBP20.4■□□□□ 0.86
LDLRAD3-205ENST00000532490 GRAPLQ8TC17 118 aaPredicted RBP20.4■□□□□ 0.86
LDLRAD3-205ENST00000532490 RTFDC1Q9BY42 306 aaPredicted RBP20.4■□□□□ 0.86
LDLRAD3-205ENST00000532490 POTEIP0CG38 1075 aa20.39■□□□□ 0.85
LDLRAD3-205ENST00000532490 POTEJP0CG39 1038 aa20.39■□□□□ 0.85
LDLRAD3-205ENST00000532490 JDP2Q8WYK2 163 aa20.39■□□□□ 0.85
LDLRAD3-205ENST00000532490 IQCA1LA6NCM1 817 aa20.38■□□□□ 0.85
LDLRAD3-205ENST00000532490 HTRA3P83110 453 aa20.38■□□□□ 0.85
LDLRAD3-205ENST00000532490 TWISTNBQ3B726 338 aaPredicted RBP20.38■□□□□ 0.85
LDLRAD3-205ENST00000532490 WDR63Q8IWG1 891 aa20.38■□□□□ 0.85
LDLRAD3-205ENST00000532490 MYD88Q99836 296 aa20.38■□□□□ 0.85
LDLRAD3-205ENST00000532490 METTL22Q9BUU2 404 aaPredicted RBP20.38■□□□□ 0.85
LDLRAD3-205ENST00000532490 TAF1DQ9H5J8 278 aaPredicted RBP20.38■□□□□ 0.85
LDLRAD3-205ENST00000532490 IRS4O14654 1257 aaPredicted RBP20.37■□□□□ 0.85
LDLRAD3-205ENST00000532490 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
LDLRAD3-205ENST00000532490 GPC2Q8N158 579 aa20.37■□□□□ 0.85
LDLRAD3-205ENST00000532490 LARGE2Q8N3Y3 721 aa20.37■□□□□ 0.85
LDLRAD3-205ENST00000532490 ZBTB38Q8NAP3 1195 aaPredicted RBP20.37■□□□□ 0.85
LDLRAD3-205ENST00000532490 CCDC191Q8NCU4 936 aa20.37■□□□□ 0.85
LDLRAD3-205ENST00000532490 VPS33BQ9H267 617 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms