RNA–Protein interactions for RNA: ENST00000531789.1

SLC39A4-208, Transcript of solute carrier family 39 member 4, humanhuman

TSL 3

Gene SLC39A4, Length 361 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-208ENST00000531789 PSMD1Q99460 953 aa16.98■□□□□ 0.31
SLC39A4-208ENST00000531789 CA12O43570 354 aa16.97■□□□□ 0.31
SLC39A4-208ENST00000531789 TEFQ10587 303 aa16.97■□□□□ 0.31
SLC39A4-208ENST00000531789 CLEC4GQ6UXB4 293 aa16.97■□□□□ 0.31
SLC39A4-208ENST00000531789 TPTE2Q6XPS3 522 aa16.97■□□□□ 0.31
SLC39A4-208ENST00000531789 USP50Q70EL3 339 aaPredicted RBP16.97■□□□□ 0.31
SLC39A4-208ENST00000531789 FMNL2Q96PY5 1086 aa16.97■□□□□ 0.31
SLC39A4-208ENST00000531789 USP16Q9Y5T5 823 aa16.97■□□□□ 0.31
SLC39A4-208ENST00000531789 ALDH1B1P30837 517 aa16.96■□□□□ 0.31
SLC39A4-208ENST00000531789 SLC51AQ86UW1 340 aa16.96■□□□□ 0.31
SLC39A4-208ENST00000531789 PRAMEF22A3QJZ6 481 aa16.95■□□□□ 0.3
SLC39A4-208ENST00000531789 CELF2O95319 508 aaKnown RBP16.95■□□□□ 0.3
SLC39A4-208ENST00000531789 BRPF1P55201 1214 aaPredicted RBP16.95■□□□□ 0.3
SLC39A4-208ENST00000531789 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
SLC39A4-208ENST00000531789 ZIC5Q96T25 663 aa16.95■□□□□ 0.3
SLC39A4-208ENST00000531789 NIP7Q9Y221 180 aaKnown RBP eCLIP16.95■□□□□ 0.31e-6■■■■□ 20.2
SLC39A4-208ENST00000531789 NUDCQ9Y266 331 aa16.95■□□□□ 0.3
SLC39A4-208ENST00000531789 SOX10P56693 466 aa16.94■□□□□ 0.3
SLC39A4-208ENST00000531789 LARGE2Q8N3Y3 721 aa16.93■□□□□ 0.3
SLC39A4-208ENST00000531789 GLIS2Q9BZE0 524 aaPredicted RBP16.93■□□□□ 0.3
SLC39A4-208ENST00000531789 ZNF652Q9Y2D9 606 aa16.93■□□□□ 0.3
SLC39A4-208ENST00000531789 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
SLC39A4-208ENST00000531789 GAS2L2Q8NHY3 880 aa16.92■□□□□ 0.3
SLC39A4-208ENST00000531789 HHIPL1Q96JK4 782 aa16.92■□□□□ 0.3
SLC39A4-208ENST00000531789 U2AF1L5P0DN76 240 aaPredicted RBP16.91■□□□□ 0.3
SLC39A4-208ENST00000531789 PRKAR2BP31323 418 aa16.91■□□□□ 0.3
SLC39A4-208ENST00000531789 U2AF1Q01081 240 aaKnown RBP eCLIP16.91■□□□□ 0.3
SLC39A4-208ENST00000531789 HLFQ16534 295 aa16.91■□□□□ 0.3
SLC39A4-208ENST00000531789 ADARB2Q9NS39 739 aaKnown RBP16.91■□□□□ 0.3
SLC39A4-208ENST00000531789 GPRC5DQ9NZD1 345 aa16.91■□□□□ 0.3
SLC39A4-208ENST00000531789 BTBD11A6QL63 1104 aa16.9■□□□□ 0.3
SLC39A4-208ENST00000531789 NBPF26B4DH59 902 aa16.9■□□□□ 0.3
SLC39A4-208ENST00000531789 CRY2Q49AN0 593 aa16.9■□□□□ 0.3
SLC39A4-208ENST00000531789 NBPF10Q6P3W6 841 aaKnown RBP16.9■□□□□ 0.3
SLC39A4-208ENST00000531789 NBPF15Q8N660 670 aa16.9■□□□□ 0.3
SLC39A4-208ENST00000531789 RSPH6AQ9H0K4 717 aa16.9■□□□□ 0.3
SLC39A4-208ENST00000531789 ZNF408Q9H9D4 720 aa16.9■□□□□ 0.3
SLC39A4-208ENST00000531789 ABCC12Q96J65 1359 aa16.89■□□□□ 0.3
SLC39A4-208ENST00000531789 TCERG1O14776 1098 aaKnown RBP16.89■□□□□ 0.29
SLC39A4-208ENST00000531789 GTF2E1P29083 439 aaPredicted RBP16.89■□□□□ 0.29
SLC39A4-208ENST00000531789 CC2D2BQ6DHV5 1058 aa16.89■□□□□ 0.29
SLC39A4-208ENST00000531789 NUTM1Q86Y26 1132 aa16.89■□□□□ 0.29
SLC39A4-208ENST00000531789 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
SLC39A4-208ENST00000531789 PRPF38BQ5VTL8 546 aaKnown RBP16.88■□□□□ 0.29
SLC39A4-208ENST00000531789 NIM1KQ8IY84 436 aa16.88■□□□□ 0.29
SLC39A4-208ENST00000531789 PGAP2Q9UHJ9 254 aa16.88■□□□□ 0.29
SLC39A4-208ENST00000531789 CEMIPQ8WUJ3 1361 aa16.88■□□□□ 0.29
SLC39A4-208ENST00000531789 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
SLC39A4-208ENST00000531789 DDX10Q13206 875 aaKnown RBP16.87■□□□□ 0.29
SLC39A4-208ENST00000531789 DLK2Q6UY11 383 aa16.87■□□□□ 0.29
SLC39A4-208ENST00000531789 HOXA10P31260 410 aaPredicted RBP16.86■□□□□ 0.29
SLC39A4-208ENST00000531789 CXCL9Q07325 125 aa16.86■□□□□ 0.29
SLC39A4-208ENST00000531789 NOGQ13253 232 aa16.86■□□□□ 0.29
SLC39A4-208ENST00000531789 AOC3Q16853 763 aa16.86■□□□□ 0.29
SLC39A4-208ENST00000531789 PPIP5K2O43314 1243 aa16.85■□□□□ 0.29
SLC39A4-208ENST00000531789 SNRPA1P09661 255 aaKnown RBP16.85■□□□□ 0.29
SLC39A4-208ENST00000531789 GMPSP49915 693 aaPredicted RBP16.85■□□□□ 0.29
SLC39A4-208ENST00000531789 RPGRQ92834 1020 aaKnown RBP16.85■□□□□ 0.29
SLC39A4-208ENST00000531789 RGL2O15211 777 aa16.84■□□□□ 0.29
SLC39A4-208ENST00000531789 FAM155AB1AL88 458 aaPredicted RBP16.83■□□□□ 0.28
SLC39A4-208ENST00000531789 PPEF1O14829 653 aaPredicted RBP16.83■□□□□ 0.28
SLC39A4-208ENST00000531789 HUNKP57058 714 aa16.83■□□□□ 0.28
SLC39A4-208ENST00000531789 GRIPAP1Q4V328 841 aa16.83■□□□□ 0.28
SLC39A4-208ENST00000531789 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
SLC39A4-208ENST00000531789 TRPM4Q8TD43 1214 aa16.83■□□□□ 0.28
SLC39A4-208ENST00000531789 SHTN1A0MZ66 631 aa16.82■□□□□ 0.28
SLC39A4-208ENST00000531789 C3orf67Q6ZVT6 689 aa16.82■□□□□ 0.28
SLC39A4-208ENST00000531789 USP48Q86UV5 1035 aa16.82■□□□□ 0.28
SLC39A4-208ENST00000531789 RTF1Q92541 710 aaKnown RBP16.82■□□□□ 0.28
SLC39A4-208ENST00000531789 CRAMP1Q96RY5 1269 aa16.82■□□□□ 0.28
SLC39A4-208ENST00000531789 NYXQ9GZU5 481 aa16.82■□□□□ 0.28
SLC39A4-208ENST00000531789 ZNRF3Q9ULT6 936 aa16.82■□□□□ 0.28
SLC39A4-208ENST00000531789 RIC1Q4ADV7 1423 aa16.81■□□□□ 0.28
SLC39A4-208ENST00000531789 TRPA1O75762 1119 aa16.81■□□□□ 0.28
SLC39A4-208ENST00000531789 NEFMP07197 916 aa16.81■□□□□ 0.28
SLC39A4-208ENST00000531789 KIF23Q02241 960 aaPredicted RBP16.81■□□□□ 0.28
SLC39A4-208ENST00000531789 RALBP1Q15311 655 aa16.81■□□□□ 0.28
SLC39A4-208ENST00000531789 ZC3H15Q8WU90 426 aaKnown RBP16.81■□□□□ 0.28
SLC39A4-208ENST00000531789 RBM17Q96I25 401 aaKnown RBP16.81■□□□□ 0.28
SLC39A4-208ENST00000531789 NUP98P52948 1817 aa16.81■□□□□ 0.28
SLC39A4-208ENST00000531789 MCM10Q7L590 875 aa16.8■□□□□ 0.28
SLC39A4-208ENST00000531789 NGEFQ8N5V2 710 aa16.8■□□□□ 0.28
SLC39A4-208ENST00000531789 RNF186Q9NXI6 227 aa16.8■□□□□ 0.28
SLC39A4-208ENST00000531789 SAGE1Q9NXZ1 904 aa16.8■□□□□ 0.28
SLC39A4-208ENST00000531789 UBN2Q6ZU65 1347 aa16.79■□□□□ 0.28
SLC39A4-208ENST00000531789 RAD17O75943 681 aa16.79■□□□□ 0.28
SLC39A4-208ENST00000531789 GPTP24298 496 aa16.79■□□□□ 0.28
SLC39A4-208ENST00000531789 SUSD4Q5VX71 490 aa16.79■□□□□ 0.28
SLC39A4-208ENST00000531789 RGMBQ6NW40 437 aa16.79■□□□□ 0.28
SLC39A4-208ENST00000531789 BCL2L13Q9BXK5 485 aa16.79■□□□□ 0.28
SLC39A4-208ENST00000531789 VPS33BQ9H267 617 aa16.79■□□□□ 0.28
SLC39A4-208ENST00000531789 ZNF316A6NFI3 1004 aaPredicted RBP16.78■□□□□ 0.28
SLC39A4-208ENST00000531789 DCTN1Q14203 1278 aa16.78■□□□□ 0.28
SLC39A4-208ENST00000531789 CNOT7Q9UIV1 285 aaKnown RBP16.78■□□□□ 0.28
SLC39A4-208ENST00000531789 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
SLC39A4-208ENST00000531789 AKAP11Q9UKA4 1901 aa16.77■□□□□ 0.28
SLC39A4-208ENST00000531789 TTLL7Q6ZT98 887 aa16.77■□□□□ 0.28
SLC39A4-208ENST00000531789 RTFDC1Q9BY42 306 aaPredicted RBP16.77■□□□□ 0.28
SLC39A4-208ENST00000531789 POLR2AP24928 1970 aaKnown RBP16.77■□□□□ 0.27
SLC39A4-208ENST00000531789 CDHR2Q9BYE9 1310 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms