RNA–Protein interactions for RNA: ENST00000531789.1

SLC39A4-208, Transcript of solute carrier family 39 member 4, humanhuman

TSL 3

Gene SLC39A4, Length 361 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-208ENST00000531789 NISCHQ9Y2I1 1504 aa32.3■■■□□ 2.76
SLC39A4-208ENST00000531789 ABCC9O60706 1549 aa29.96■■■□□ 2.39
SLC39A4-208ENST00000531789 CCDC180Q9P1Z9 1646 aa29.21■■■□□ 2.27
SLC39A4-208ENST00000531789 DNAJC5BQ9UF47 199 aa28.79■■■□□ 2.2
SLC39A4-208ENST00000531789 RB1CC1Q8TDY2 1594 aa28.15■■■□□ 2.1
SLC39A4-208ENST00000531789 PABPN1Q86U42 306 aaKnown RBP eCLIP27.83■■■□□ 2.05
SLC39A4-208ENST00000531789 NACADO15069 1562 aa27.78■■■□□ 2.04
SLC39A4-208ENST00000531789 DCAF8L2P0C7V8 631 aa27.62■■■□□ 2.01
SLC39A4-208ENST00000531789 UNC13AQ9UPW8 1703 aa27.58■■■□□ 2.01
SLC39A4-208ENST00000531789 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
SLC39A4-208ENST00000531789 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
SLC39A4-208ENST00000531789 CECR2Q9BXF3 1484 aa27.03■■□□□ 1.92
SLC39A4-208ENST00000531789 CC2D2AQ9P2K1 1620 aa27.01■■□□□ 1.91
SLC39A4-208ENST00000531789 SHROOM4Q9ULL8 1493 aa26.85■■□□□ 1.89
SLC39A4-208ENST00000531789 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
SLC39A4-208ENST00000531789 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
SLC39A4-208ENST00000531789 SCRIBQ14160 1630 aa26.65■■□□□ 1.86
SLC39A4-208ENST00000531789 ZCCHC6Q5VYS8 1495 aaKnown RBP26.6■■□□□ 1.85
SLC39A4-208ENST00000531789 DCAF1Q9Y4B6 1507 aa26.58■■□□□ 1.85
SLC39A4-208ENST00000531789 CUX2O14529 1486 aa26.02■■□□□ 1.76
SLC39A4-208ENST00000531789 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
SLC39A4-208ENST00000531789 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
SLC39A4-208ENST00000531789 NESP48681 1621 aa25.57■■□□□ 1.68
SLC39A4-208ENST00000531789 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
SLC39A4-208ENST00000531789 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
SLC39A4-208ENST00000531789 HMGXB3Q12766 1538 aa25.4■■□□□ 1.66
SLC39A4-208ENST00000531789 THOC2Q8NI27 1593 aaKnown RBP25.39■■□□□ 1.65
SLC39A4-208ENST00000531789 SMARCA2P51531 1590 aa25.37■■□□□ 1.65
SLC39A4-208ENST00000531789 SMARCA4P51532 1647 aa25.33■■□□□ 1.65
SLC39A4-208ENST00000531789 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
SLC39A4-208ENST00000531789 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
SLC39A4-208ENST00000531789 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
SLC39A4-208ENST00000531789 BAZ1AQ9NRL2 1556 aaPredicted RBP25.08■■□□□ 1.61
SLC39A4-208ENST00000531789 PDS5BQ9NTI5 1447 aa25.07■■□□□ 1.6
SLC39A4-208ENST00000531789 PEG3Q9GZU2 1588 aa25.06■■□□□ 1.6
SLC39A4-208ENST00000531789 MROH2BQ7Z745 1585 aa24.92■■□□□ 1.58
SLC39A4-208ENST00000531789 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
SLC39A4-208ENST00000531789 CADPSQ9ULU8 1353 aa24.89■■□□□ 1.57
SLC39A4-208ENST00000531789 WDR62O43379 1518 aa24.87■■□□□ 1.57
SLC39A4-208ENST00000531789 OSCARQ8IYS5 282 aa24.77■■□□□ 1.56
SLC39A4-208ENST00000531789 CEP164Q9UPV0 1460 aa24.67■■□□□ 1.54
SLC39A4-208ENST00000531789 FANCD2Q9BXW9 1451 aa24.61■■□□□ 1.53
SLC39A4-208ENST00000531789 WIZO95785 1651 aa24.59■■□□□ 1.53
SLC39A4-208ENST00000531789 RIMBP3CA6NJZ7 1639 aa24.53■■□□□ 1.52
SLC39A4-208ENST00000531789 RIMBP3BA6NNM3 1639 aa24.53■■□□□ 1.52
SLC39A4-208ENST00000531789 RIMBP3Q9UFD9 1639 aa24.53■■□□□ 1.52
SLC39A4-208ENST00000531789 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
SLC39A4-208ENST00000531789 CFTRP13569 1480 aa24.45■■□□□ 1.51
SLC39A4-208ENST00000531789 ARHGEF11O15085 1522 aa24.36■■□□□ 1.49
SLC39A4-208ENST00000531789 ZNF608Q9ULD9 1512 aaPredicted RBP24.3■■□□□ 1.48
SLC39A4-208ENST00000531789 CYB5RLQ6IPT4 315 aa24.28■■□□□ 1.48
SLC39A4-208ENST00000531789 TRHP20396 242 aaPredicted RBP24.21■■□□□ 1.47
SLC39A4-208ENST00000531789 IFT140Q96RY7 1462 aa24.2■■□□□ 1.47
SLC39A4-208ENST00000531789 TOP2AP11388 1531 aaKnown RBP24.17■■□□□ 1.46
SLC39A4-208ENST00000531789 RSF1Q96T23 1441 aaPredicted RBP24.14■■□□□ 1.45
SLC39A4-208ENST00000531789 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
SLC39A4-208ENST00000531789 ARAP1Q96P48 1450 aa24.1■■□□□ 1.45
SLC39A4-208ENST00000531789 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.45
SLC39A4-208ENST00000531789 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
SLC39A4-208ENST00000531789 CHD1O14646 1710 aa24.05■■□□□ 1.44
SLC39A4-208ENST00000531789 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.436e-10■■■■□ 20.6
SLC39A4-208ENST00000531789 FBLN2P98095 1184 aa23.97■■□□□ 1.43
SLC39A4-208ENST00000531789 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
SLC39A4-208ENST00000531789 CCDC88BA6NC98 1476 aa23.95■■□□□ 1.42
SLC39A4-208ENST00000531789 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
SLC39A4-208ENST00000531789 ABCC8Q09428 1581 aa23.91■■□□□ 1.42
SLC39A4-208ENST00000531789 DNMBPQ6XZF7 1577 aa23.9■■□□□ 1.42
SLC39A4-208ENST00000531789 POLA1P09884 1462 aaPredicted RBP23.79■■□□□ 1.4
SLC39A4-208ENST00000531789 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
SLC39A4-208ENST00000531789 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
SLC39A4-208ENST00000531789 CLASP1Q7Z460 1538 aa23.74■■□□□ 1.39
SLC39A4-208ENST00000531789 SNAPC4Q5SXM2 1469 aa23.69■■□□□ 1.38
SLC39A4-208ENST00000531789 SOGA1O94964 1423 aa23.67■■□□□ 1.38
SLC39A4-208ENST00000531789 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
SLC39A4-208ENST00000531789 SYNJ1O43426 1573 aa23.64■■□□□ 1.37
SLC39A4-208ENST00000531789 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
SLC39A4-208ENST00000531789 GAPVD1Q14C86 1478 aa23.55■■□□□ 1.36
SLC39A4-208ENST00000531789 FGD5Q6ZNL6 1462 aa23.55■■□□□ 1.36
SLC39A4-208ENST00000531789 WDR97A6NE52 1622 aa23.54■■□□□ 1.36
SLC39A4-208ENST00000531789 SYNJ2O15056 1496 aa23.51■■□□□ 1.35
SLC39A4-208ENST00000531789 GRIN2BQ13224 1484 aa23.51■■□□□ 1.35
SLC39A4-208ENST00000531789 CUX1P39880 1505 aa23.43■■□□□ 1.34
SLC39A4-208ENST00000531789 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
SLC39A4-208ENST00000531789 PBRM1Q86U86 1689 aa23.39■■□□□ 1.34
SLC39A4-208ENST00000531789 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
SLC39A4-208ENST00000531789 KIF13AQ9H1H9 1805 aa23.24■■□□□ 1.31
SLC39A4-208ENST00000531789 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
SLC39A4-208ENST00000531789 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
SLC39A4-208ENST00000531789 ABCA10Q8WWZ4 1543 aa23.22■■□□□ 1.31
SLC39A4-208ENST00000531789 NUP160Q12769 1436 aa23.16■■□□□ 1.3
SLC39A4-208ENST00000531789 SHROOM2Q13796 1616 aa23.15■■□□□ 1.3
SLC39A4-208ENST00000531789 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
SLC39A4-208ENST00000531789 KDM4FA0A1W2PPD8 638 aa23.05■■□□□ 1.28
SLC39A4-208ENST00000531789 FAM69CQ0P6D2 419 aa23.05■■□□□ 1.28
SLC39A4-208ENST00000531789 ILDR1Q86SU0 546 aaPredicted RBP23.04■■□□□ 1.28
SLC39A4-208ENST00000531789 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
SLC39A4-208ENST00000531789 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
SLC39A4-208ENST00000531789 ABCC10Q5T3U5 1492 aa23■■□□□ 1.27
SLC39A4-208ENST00000531789 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
SLC39A4-208ENST00000531789 JPH4Q96JJ6 628 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms