RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 NLRP3Q96P20 1036 aa19.13■□□□□ 0.65
NXF1-210ENST00000531579 TRMT112Q9UI30 125 aaKnown RBP19.13■□□□□ 0.65
NXF1-210ENST00000531579 ZNF428Q96B54 188 aa19.12■□□□□ 0.65
NXF1-210ENST00000531579 METTL22Q9BUU2 404 aaPredicted RBP19.12■□□□□ 0.65
NXF1-210ENST00000531579 SH3TC1Q8TE82 1336 aa19.11■□□□□ 0.65
NXF1-210ENST00000531579 TCERG1O14776 1098 aaKnown RBP19.11■□□□□ 0.65
NXF1-210ENST00000531579 CRY2Q49AN0 593 aa19.11■□□□□ 0.65
NXF1-210ENST00000531579 TRMT2AQ8IZ69 625 aaKnown RBP19.11■□□□□ 0.65
NXF1-210ENST00000531579 RIC1Q4ADV7 1423 aa19.1■□□□□ 0.65
NXF1-210ENST00000531579 PI4KAP2A4QPH2 592 aa19.1■□□□□ 0.65
NXF1-210ENST00000531579 ATP5J2-PTCD1G3V325 749 aa19.1■□□□□ 0.65
NXF1-210ENST00000531579 HSP90B1P14625 803 aaKnown RBP19.1■□□□□ 0.65
NXF1-210ENST00000531579 NEXNQ0ZGT2 675 aa19.1■□□□□ 0.65
NXF1-210ENST00000531579 PI4KAP1Q8N8J0 262 aa19.1■□□□□ 0.65
NXF1-210ENST00000531579 CCDC191Q8NCU4 936 aa19.1■□□□□ 0.65
NXF1-210ENST00000531579 MAP3K2Q9Y2U5 619 aa19.1■□□□□ 0.65
NXF1-210ENST00000531579 HOXA10P31260 410 aaPredicted RBP19.09■□□□□ 0.65
NXF1-210ENST00000531579 FLIIQ13045 1269 aa19.09■□□□□ 0.65
NXF1-210ENST00000531579 SOGA3Q5TF21 947 aa19.09■□□□□ 0.65
NXF1-210ENST00000531579 MYD88Q99836 296 aa19.09■□□□□ 0.65
NXF1-210ENST00000531579 BRCA1P38398 1863 aaKnown RBP19.08■□□□□ 0.65
NXF1-210ENST00000531579 G2E3Q7L622 706 aa19.08■□□□□ 0.64
NXF1-210ENST00000531579 RPGRQ92834 1020 aaKnown RBP19.08■□□□□ 0.64
NXF1-210ENST00000531579 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.64
NXF1-210ENST00000531579 RBM17Q96I25 401 aaKnown RBP19.08■□□□□ 0.64
NXF1-210ENST00000531579 ANKRD31Q8N7Z5 1873 aa19.07■□□□□ 0.64
NXF1-210ENST00000531579 CT47B1P0C2W7 299 aaPredicted RBP19.07■□□□□ 0.64
NXF1-210ENST00000531579 FKBP5Q13451 457 aaPredicted RBP19.07■□□□□ 0.64
NXF1-210ENST00000531579 PRPF40BQ6NWY9 871 aaKnown RBP19.07■□□□□ 0.64
NXF1-210ENST00000531579 ZBTB38Q8NAP3 1195 aaPredicted RBP19.07■□□□□ 0.64
NXF1-210ENST00000531579 CRAMP1Q96RY5 1269 aa19.07■□□□□ 0.64
NXF1-210ENST00000531579 CWC25Q9NXE8 425 aaPredicted RBP19.07■□□□□ 0.64
NXF1-210ENST00000531579 CHD4Q14839 1912 aa19.07■□□□□ 0.64
NXF1-210ENST00000531579 ABCC12Q96J65 1359 aa19.06■□□□□ 0.64
NXF1-210ENST00000531579 C21orf2O43822 256 aa19.06■□□□□ 0.64
NXF1-210ENST00000531579 FAM89AQ96GI7 184 aa19.06■□□□□ 0.64
NXF1-210ENST00000531579 GOLGB1Q14789 3259 aaKnown RBP19.05■□□□□ 0.64
NXF1-210ENST00000531579 UTRNP46939 3433 aa19.05■□□□□ 0.64
NXF1-210ENST00000531579 ARFGEF1Q9Y6D6 1849 aa19.04■□□□□ 0.64
NXF1-210ENST00000531579 DLEC1Q9Y238 1755 aa19.04■□□□□ 0.64
NXF1-210ENST00000531579 PCCAP05165 728 aaPredicted RBP19.04■□□□□ 0.64
NXF1-210ENST00000531579 HCLS1P14317 486 aaPredicted RBP19.04■□□□□ 0.64
NXF1-210ENST00000531579 HNRNPUQ00839 825 aaKnown RBP eCLIP19.04■□□□□ 0.64
NXF1-210ENST00000531579 GRIPAP1Q4V328 841 aa19.04■□□□□ 0.64
NXF1-210ENST00000531579 CC2D2BQ6DHV5 1058 aa19.04■□□□□ 0.64
NXF1-210ENST00000531579 C7orf43Q8WVR3 580 aa19.04■□□□□ 0.64
NXF1-210ENST00000531579 DNAAF4Q8WXU2 420 aa19.04■□□□□ 0.64
NXF1-210ENST00000531579 ADCY9O60503 1353 aa19.04■□□□□ 0.64
NXF1-210ENST00000531579 ALDH1L2Q3SY69 923 aa19.03■□□□□ 0.64
NXF1-210ENST00000531579 SYNE4Q8N205 404 aa19.03■□□□□ 0.64
NXF1-210ENST00000531579 ANKRD36CQ5JPF3 1778 aa19.03■□□□□ 0.64
NXF1-210ENST00000531579 CACNA1FO60840 1977 aa19.02■□□□□ 0.64
NXF1-210ENST00000531579 IRS4O14654 1257 aaPredicted RBP19.02■□□□□ 0.64
NXF1-210ENST00000531579 BBOX1O75936 387 aa19.02■□□□□ 0.64
NXF1-210ENST00000531579 IGKV5-2P06315 115 aa19.02■□□□□ 0.64
NXF1-210ENST00000531579 SF3B3Q15393 1217 aaKnown RBP19.02■□□□□ 0.64
NXF1-210ENST00000531579 DDX46Q7L014 1031 aaKnown RBP19.02■□□□□ 0.64
NXF1-210ENST00000531579 RTKN2Q8IZC4 609 aa19.02■□□□□ 0.64
NXF1-210ENST00000531579 LINS1Q8NG48 757 aa19.02■□□□□ 0.64
NXF1-210ENST00000531579 TMX4Q9H1E5 349 aaPredicted RBP19.02■□□□□ 0.64
NXF1-210ENST00000531579 NEURL1BA8MQ27 555 aa19.01■□□□□ 0.63
NXF1-210ENST00000531579 LMNB1P20700 586 aa19.01■□□□□ 0.63
NXF1-210ENST00000531579 CCDC93Q567U6 631 aa19.01■□□□□ 0.63
NXF1-210ENST00000531579 C3orf67Q6ZVT6 689 aa19.01■□□□□ 0.63
NXF1-210ENST00000531579 ZNF784Q8NCA9 323 aaPredicted RBP19.01■□□□□ 0.63
NXF1-210ENST00000531579 ZNF219Q9P2Y4 722 aaPredicted RBP19.01■□□□□ 0.63
NXF1-210ENST00000531579 C9orf131Q5VYM1 1079 aa19■□□□□ 0.63
NXF1-210ENST00000531579 MRPL50Q8N5N7 158 aaKnown RBP19■□□□□ 0.63
NXF1-210ENST00000531579 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
NXF1-210ENST00000531579 ARFGEF2Q9Y6D5 1785 aa18.99■□□□□ 0.63
NXF1-210ENST00000531579 PDE8AO60658 829 aa18.99■□□□□ 0.63
NXF1-210ENST00000531579 RTL5Q5HYW3 569 aaPredicted RBP18.99■□□□□ 0.63
NXF1-210ENST00000531579 SSH1Q8WYL5 1049 aa18.99■□□□□ 0.63
NXF1-210ENST00000531579 TAOK3Q9H2K8 898 aa18.99■□□□□ 0.63
NXF1-210ENST00000531579 PTPRCP08575 1304 aa18.99■□□□□ 0.63
NXF1-210ENST00000531579 CDHR2Q9BYE9 1310 aa18.99■□□□□ 0.63
NXF1-210ENST00000531579 COL11A2P13942 1736 aaPredicted RBP18.98■□□□□ 0.63
NXF1-210ENST00000531579 H7C1W4 665 aa18.98■□□□□ 0.63
NXF1-210ENST00000531579 NFKBIEO00221 500 aa18.98■□□□□ 0.63
NXF1-210ENST00000531579 GCKRQ14397 625 aa18.98■□□□□ 0.63
NXF1-210ENST00000531579 CWF19L2Q2TBE0 894 aaKnown RBP18.98■□□□□ 0.63
NXF1-210ENST00000531579 TMC4Q7Z404 712 aa18.98■□□□□ 0.63
NXF1-210ENST00000531579 RNF181Q9P0P0 153 aa18.98■□□□□ 0.63
NXF1-210ENST00000531579 GRAPQ13588 217 aa18.97■□□□□ 0.63
NXF1-210ENST00000531579 GRAPLQ8TC17 118 aaPredicted RBP18.97■□□□□ 0.63
NXF1-210ENST00000531579 ATP6V0A2Q9Y487 856 aa18.97■□□□□ 0.63
NXF1-210ENST00000531579 SLX4Q8IY92 1834 aa18.97■□□□□ 0.63
NXF1-210ENST00000531579 ZC3H4Q9UPT8 1303 aaKnown RBP18.97■□□□□ 0.63
NXF1-210ENST00000531579 PPEF1O14829 653 aaPredicted RBP18.96■□□□□ 0.63
NXF1-210ENST00000531579 FKBP4Q02790 459 aaKnown RBP eCLIP18.96■□□□□ 0.63
NXF1-210ENST00000531579 RASSF7Q02833 373 aa18.96■□□□□ 0.63
NXF1-210ENST00000531579 BEND3Q5T5X7 828 aa18.96■□□□□ 0.63
NXF1-210ENST00000531579 SP8Q8IXZ3 490 aa18.96■□□□□ 0.63
NXF1-210ENST00000531579 ABCC4O15439 1325 aa18.96■□□□□ 0.63
NXF1-210ENST00000531579 TNRC6CQ9HCJ0 1690 aaKnown RBP18.95■□□□□ 0.62
NXF1-210ENST00000531579 F6X3S4 739 aa18.95■□□□□ 0.62
NXF1-210ENST00000531579 ALDH1L1O75891 902 aa18.95■□□□□ 0.62
NXF1-210ENST00000531579 BRPF1P55201 1214 aaPredicted RBP18.95■□□□□ 0.62
NXF1-210ENST00000531579 CCDC152Q4G0S7 254 aa18.95■□□□□ 0.62
NXF1-210ENST00000531579 PSMD1Q99460 953 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms