RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	SRGN	P10124	158 aa		33.09	■■■□□ 2.89
PICALM-215	ENST00000531558	TTLL6	Q8N841	843 aa		33.09	■■■□□ 2.89
PICALM-215	ENST00000531558	ATP5J2-PTCD1	G3V325	749 aa		33.08	■■■□□ 2.89
PICALM-215	ENST00000531558	TRMT2A	Q8IZ69	625 aa	Known RBP	33.08	■■■□□ 2.89
PICALM-215	ENST00000531558	ZNF622	Q969S3	477 aa	Known RBP eCLIP	33.08	■■■□□ 2.89
PICALM-215	ENST00000531558	TNRC6C	Q9HCJ0	1690 aa	Known RBP	33.07	■■■□□ 2.89
PICALM-215	ENST00000531558	FLII	Q13045	1269 aa		33.07	■■■□□ 2.88
PICALM-215	ENST00000531558	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.06	■■■□□ 2.88
PICALM-215	ENST00000531558	TRIM28	Q13263	835 aa	Known RBP	33.06	■■■□□ 2.88
PICALM-215	ENST00000531558	STYK1	Q6J9G0	422 aa		33.06	■■■□□ 2.88
PICALM-215	ENST00000531558	KSR2	Q6VAB6	950 aa		33.06	■■■□□ 2.88
PICALM-215	ENST00000531558	MASTL	Q96GX5	879 aa		33.06	■■■□□ 2.88
PICALM-215	ENST00000531558	MAP3K2	Q9Y2U5	619 aa		33.06	■■■□□ 2.88
PICALM-215	ENST00000531558	ADCY9	O60503	1353 aa		33.06	■■■□□ 2.88
PICALM-215	ENST00000531558	ARFGEF1	Q9Y6D6	1849 aa		33.05	■■■□□ 2.88
PICALM-215	ENST00000531558	PI4KAP2	A4QPH2	592 aa		33.05	■■■□□ 2.88
PICALM-215	ENST00000531558	PI4KAP1	Q8N8J0	262 aa		33.05	■■■□□ 2.88
PICALM-215	ENST00000531558	METTL22	Q9BUU2	404 aa	Predicted RBP	33.05	■■■□□ 2.88
PICALM-215	ENST00000531558	TRMT112	Q9UI30	125 aa	Known RBP	33.05	■■■□□ 2.88
PICALM-215	ENST00000531558	MYD88	Q99836	296 aa		33.04	■■■□□ 2.88
PICALM-215	ENST00000531558	NPR1	P16066	1061 aa		33.03	■■■□□ 2.88
PICALM-215	ENST00000531558	SH3TC1	Q8TE82	1336 aa		33.02	■■■□□ 2.88
PICALM-215	ENST00000531558	CRY2	Q49AN0	593 aa		33.02	■■■□□ 2.88
PICALM-215	ENST00000531558	SLC10A5	Q5PT55	438 aa		33.02	■■■□□ 2.88
PICALM-215	ENST00000531558	CNKSR1	Q969H4	720 aa		33.02	■■■□□ 2.88
PICALM-215	ENST00000531558	CACNA1F	O60840	1977 aa		33.01	■■■□□ 2.88
PICALM-215	ENST00000531558	YY1	P25490	414 aa		33.01	■■■□□ 2.87
PICALM-215	ENST00000531558	FKBP5	Q13451	457 aa	Predicted RBP	33.01	■■■□□ 2.87
PICALM-215	ENST00000531558	ZNF428	Q96B54	188 aa		33.01	■■■□□ 2.87
PICALM-215	ENST00000531558	CHD4	Q14839	1912 aa		33	■■■□□ 2.87
PICALM-215	ENST00000531558	ARHGAP27	Q6ZUM4	889 aa		32.99	■■■□□ 2.87
PICALM-215	ENST00000531558	SYNE4	Q8N205	404 aa		32.99	■■■□□ 2.87
PICALM-215	ENST00000531558	PRPF40B	Q6NWY9	871 aa	Known RBP	32.98	■■■□□ 2.87
PICALM-215	ENST00000531558	C3orf67	Q6ZVT6	689 aa		32.98	■■■□□ 2.87
PICALM-215	ENST00000531558	CCDC191	Q8NCU4	936 aa		32.98	■■■□□ 2.87
PICALM-215	ENST00000531558	NLRP3	Q96P20	1036 aa		32.97	■■■□□ 2.87
PICALM-215	ENST00000531558	HCLS1	P14317	486 aa	Predicted RBP	32.96	■■■□□ 2.87
PICALM-215	ENST00000531558	NEXN	Q0ZGT2	675 aa		32.96	■■■□□ 2.87
PICALM-215	ENST00000531558	FAM89A	Q96GI7	184 aa		32.96	■■■□□ 2.87
PICALM-215	ENST00000531558	CWC25	Q9NXE8	425 aa	Predicted RBP	32.96	■■■□□ 2.87
PICALM-215	ENST00000531558	IGKV5-2	P06315	115 aa		32.95	■■■□□ 2.87
PICALM-215	ENST00000531558	RPGR	Q92834	1020 aa	Known RBP	32.95	■■■□□ 2.87
PICALM-215	ENST00000531558	HOXA10	P31260	410 aa	Predicted RBP	32.94	■■■□□ 2.86
PICALM-215	ENST00000531558	DNAAF4	Q8WXU2	420 aa		32.94	■■■□□ 2.86
PICALM-215	ENST00000531558	CT47B1	P0C2W7	299 aa	Predicted RBP	32.93	■■■□□ 2.86
PICALM-215	ENST00000531558	ALDH1B1	P30837	517 aa		32.93	■■■□□ 2.86
PICALM-215	ENST00000531558	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.93	■■■□□ 2.86
PICALM-215	ENST00000531558	C21orf2	O43822	256 aa		32.92	■■■□□ 2.86
PICALM-215	ENST00000531558	MRPL50	Q8N5N7	158 aa	Known RBP	32.92	■■■□□ 2.86
PICALM-215	ENST00000531558	SSH1	Q8WYL5	1049 aa		32.92	■■■□□ 2.86
PICALM-215	ENST00000531558	SLX4	Q8IY92	1834 aa		32.92	■■■□□ 2.86
PICALM-215	ENST00000531558	RTL5	Q5HYW3	569 aa	Predicted RBP	32.91	■■■□□ 2.86
PICALM-215	ENST00000531558	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.91	■■■□□ 2.86
PICALM-215	ENST00000531558	ZBED9	Q6R2W3	1325 aa		32.91	■■■□□ 2.86
PICALM-215	ENST00000531558	NEURL1B	A8MQ27	555 aa		32.9	■■■□□ 2.86
PICALM-215	ENST00000531558	PCCA	P05165	728 aa	Predicted RBP	32.9	■■■□□ 2.86
PICALM-215	ENST00000531558	CWF19L2	Q2TBE0	894 aa	Known RBP	32.9	■■■□□ 2.86
PICALM-215	ENST00000531558	RBM17	Q96I25	401 aa	Known RBP	32.9	■■■□□ 2.86
PICALM-215	ENST00000531558	DDX60	Q8IY21	1712 aa	Known RBP	32.89	■■■□□ 2.86
PICALM-215	ENST00000531558	IRS4	O14654	1257 aa	Predicted RBP	32.89	■■■□□ 2.86
PICALM-215	ENST00000531558	ALDH1L2	Q3SY69	923 aa		32.89	■■■□□ 2.86
PICALM-215	ENST00000531558	CRAMP1	Q96RY5	1269 aa		32.89	■■■□□ 2.86
PICALM-215	ENST00000531558	CACNA1S	Q13698	1873 aa		32.88	■■■□□ 2.85
PICALM-215	ENST00000531558		F6X3S4	739 aa		32.88	■■■□□ 2.85
PICALM-215	ENST00000531558	C7orf43	Q8WVR3	580 aa		32.88	■■■□□ 2.85
PICALM-215	ENST00000531558	SOGA3	Q5TF21	947 aa		32.87	■■■□□ 2.85
PICALM-215	ENST00000531558	LINS1	Q8NG48	757 aa		32.87	■■■□□ 2.85
PICALM-215	ENST00000531558	LAMB2	P55268	1798 aa		32.86	■■■□□ 2.85
PICALM-215	ENST00000531558	BCL2L13	Q9BXK5	485 aa		32.86	■■■□□ 2.85
PICALM-215	ENST00000531558	NFKBIE	O00221	500 aa		32.85	■■■□□ 2.85
PICALM-215	ENST00000531558	HSP90B1	P14625	803 aa	Known RBP	32.85	■■■□□ 2.85
PICALM-215	ENST00000531558	RASSF7	Q02833	373 aa		32.85	■■■□□ 2.85
PICALM-215	ENST00000531558	SMC4	Q9NTJ3	1288 aa		32.85	■■■□□ 2.85
PICALM-215	ENST00000531558	ABCC4	O15439	1325 aa		32.84	■■■□□ 2.85
PICALM-215	ENST00000531558	JARID2	Q92833	1246 aa	Predicted RBP	32.84	■■■□□ 2.85
PICALM-215	ENST00000531558	PTPRC	P08575	1304 aa		32.83	■■■□□ 2.85
PICALM-215	ENST00000531558	CDHR2	Q9BYE9	1310 aa		32.83	■■■□□ 2.85
PICALM-215	ENST00000531558	GCKR	Q14397	625 aa		32.83	■■■□□ 2.85
PICALM-215	ENST00000531558	SF3B3	Q15393	1217 aa	Known RBP	32.83	■■■□□ 2.85
PICALM-215	ENST00000531558	CCDC93	Q567U6	631 aa		32.83	■■■□□ 2.85
PICALM-215	ENST00000531558	BEND3	Q5T5X7	828 aa		32.82	■■■□□ 2.84
PICALM-215	ENST00000531558	C9orf131	Q5VYM1	1079 aa		32.81	■■■□□ 2.84
PICALM-215	ENST00000531558	DDX46	Q7L014	1031 aa	Known RBP	32.81	■■■□□ 2.84
PICALM-215	ENST00000531558	PPEF1	O14829	653 aa	Predicted RBP	32.8	■■■□□ 2.84
PICALM-215	ENST00000531558	OLFM4	Q6UX06	510 aa		32.8	■■■□□ 2.84
PICALM-215	ENST00000531558	LTBP3	Q9NS15	1303 aa		32.79	■■■□□ 2.84
PICALM-215	ENST00000531558		H7C1W4	665 aa		32.79	■■■□□ 2.84
PICALM-215	ENST00000531558	TAOK3	Q9H2K8	898 aa		32.79	■■■□□ 2.84
PICALM-215	ENST00000531558	FER1L6	Q2WGJ9	1857 aa		32.79	■■■□□ 2.84
PICALM-215	ENST00000531558	PDE8A	O60658	829 aa		32.78	■■■□□ 2.84
PICALM-215	ENST00000531558	LMNB1	P20700	586 aa		32.78	■■■□□ 2.84
PICALM-215	ENST00000531558	PRELP	P51888	382 aa		32.78	■■■□□ 2.84
PICALM-215	ENST00000531558	RARS	P54136	660 aa	Known RBP	32.78	■■■□□ 2.84
PICALM-215	ENST00000531558	UBE3B	Q7Z3V4	1068 aa		32.78	■■■□□ 2.84
PICALM-215	ENST00000531558	RNF181	Q9P0P0	153 aa		32.78	■■■□□ 2.84
PICALM-215	ENST00000531558	GRAP	Q13588	217 aa		32.77	■■■□□ 2.84
PICALM-215	ENST00000531558	CC2D2B	Q6DHV5	1058 aa		32.77	■■■□□ 2.84
PICALM-215	ENST00000531558	SLC4A10	Q6U841	1118 aa		32.77	■■■□□ 2.84
PICALM-215	ENST00000531558	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.77	■■■□□ 2.84
PICALM-215	ENST00000531558	GRAPL	Q8TC17	118 aa	Predicted RBP	32.77	■■■□□ 2.84

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