RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 MAP3K15Q6ZN16 1313 aa28■■■□□ 2.07
CHKA-206ENST00000531341 UBN2Q6ZU65 1347 aa28■■■□□ 2.07
CHKA-206ENST00000531341 ERVV-1B6SEH8 477 aa28■■■□□ 2.07
CHKA-206ENST00000531341 NYXQ9GZU5 481 aa28■■■□□ 2.07
CHKA-206ENST00000531341 LTBP1Q14766 1721 aa27.99■■■□□ 2.07
CHKA-206ENST00000531341 SUSD4Q5VX71 490 aa27.99■■■□□ 2.07
CHKA-206ENST00000531341 JDP2Q8WYK2 163 aa27.99■■■□□ 2.07
CHKA-206ENST00000531341 TCERG1O14776 1098 aaKnown RBP27.98■■■□□ 2.07
CHKA-206ENST00000531341 MYL6BP14649 208 aa27.98■■■□□ 2.07
CHKA-206ENST00000531341 EIF4A1P60842 406 aaKnown RBP27.98■■■□□ 2.07
CHKA-206ENST00000531341 C3orf67Q6ZVT6 689 aa27.98■■■□□ 2.07
CHKA-206ENST00000531341 THUMPD2Q9BTF0 503 aaKnown RBP27.98■■■□□ 2.07
CHKA-206ENST00000531341 ZBTB3Q9H5J0 574 aa27.98■■■□□ 2.07
CHKA-206ENST00000531341 WDR33Q9C0J8 1336 aaKnown RBP27.97■■■□□ 2.07
CHKA-206ENST00000531341 HOXA10P31260 410 aaPredicted RBP27.97■■■□□ 2.07
CHKA-206ENST00000531341 EPS15P42566 896 aa27.97■■■□□ 2.07
CHKA-206ENST00000531341 SCNN1DP51172 638 aa27.97■■■□□ 2.07
CHKA-206ENST00000531341 LAMB4A4D0S4 1761 aa27.96■■■□□ 2.07
CHKA-206ENST00000531341 HSPA8P11142 646 aaKnown RBP27.96■■■□□ 2.07
CHKA-206ENST00000531341 EIF6P56537 245 aaKnown RBP27.96■■■□□ 2.07
CHKA-206ENST00000531341 RPGRQ92834 1020 aaKnown RBP27.96■■■□□ 2.07
CHKA-206ENST00000531341 DDX21Q9NR30 783 aaKnown RBP eCLIP27.96■■■□□ 2.07
CHKA-206ENST00000531341 ABT1Q9ULW3 272 aaKnown RBP27.95■■■□□ 2.06
CHKA-206ENST00000531341 NUP98P52948 1817 aa27.95■■■□□ 2.06
CHKA-206ENST00000531341 CC2D2BQ6DHV5 1058 aa27.94■■■□□ 2.06
CHKA-206ENST00000531341 KIF6Q6ZMV9 814 aa27.94■■■□□ 2.06
CHKA-206ENST00000531341 ZNF34Q8IZ26 560 aa27.94■■■□□ 2.06
CHKA-206ENST00000531341 LARGE2Q8N3Y3 721 aa27.94■■■□□ 2.06
CHKA-206ENST00000531341 PLEKHF1Q96S99 279 aa27.93■■■□□ 2.06
CHKA-206ENST00000531341 KDM3BQ7LBC6 1761 aa27.93■■■□□ 2.06
CHKA-206ENST00000531341 NTSR2O95665 410 aa27.92■■■□□ 2.06
CHKA-206ENST00000531341 PNISRQ8TF01 805 aaKnown RBP27.92■■■□□ 2.06
CHKA-206ENST00000531341 RIC1Q4ADV7 1423 aa27.92■■■□□ 2.06
CHKA-206ENST00000531341 TRAF5O00463 557 aa27.91■■■□□ 2.06
CHKA-206ENST00000531341 PPEF1O14829 653 aaPredicted RBP27.91■■■□□ 2.06
CHKA-206ENST00000531341 RBM17Q96I25 401 aaKnown RBP27.91■■■□□ 2.06
CHKA-206ENST00000531341 CRAMP1Q96RY5 1269 aa27.91■■■□□ 2.06
CHKA-206ENST00000531341 LMOD1P29536 600 aaPredicted RBP27.9■■■□□ 2.06
CHKA-206ENST00000531341 CST9Q5W186 159 aa27.9■■■□□ 2.06
CHKA-206ENST00000531341 IBTKQ9P2D0 1353 aaPredicted RBP27.89■■■□□ 2.06
CHKA-206ENST00000531341 DLG5Q8TDM6 1919 aa27.89■■■□□ 2.06
CHKA-206ENST00000531341 GIGYF2Q6Y7W6 1299 aaKnown RBP27.89■■■□□ 2.06
CHKA-206ENST00000531341 MAP2K1Q02750 393 aaPredicted RBP27.88■■■□□ 2.05
CHKA-206ENST00000531341 CYP4F22Q6NT55 531 aa27.88■■■□□ 2.05
CHKA-206ENST00000531341 NFE2L2Q16236 605 aa27.87■■■□□ 2.05
CHKA-206ENST00000531341 AOC3Q16853 763 aa27.87■■■□□ 2.05
CHKA-206ENST00000531341 LRP10Q7Z4F1 713 aa27.87■■■□□ 2.05
CHKA-206ENST00000531341 USP50Q70EL3 339 aaPredicted RBP27.86■■■□□ 2.05
CHKA-206ENST00000531341 CAPNS2Q96L46 248 aa27.86■■■□□ 2.05
CHKA-206ENST00000531341 PPIP5K2O43314 1243 aa27.85■■■□□ 2.05
CHKA-206ENST00000531341 GRM1Q13255 1194 aa27.85■■■□□ 2.05
CHKA-206ENST00000531341 PDIA6Q15084 440 aa27.85■■■□□ 2.05
CHKA-206ENST00000531341 GRIPAP1Q4V328 841 aa27.85■■■□□ 2.05
CHKA-206ENST00000531341 NIM1KQ8IY84 436 aa27.85■■■□□ 2.05
CHKA-206ENST00000531341 ABHD8Q96I13 439 aa27.85■■■□□ 2.05
CHKA-206ENST00000531341 PAXIP1Q6ZW49 1069 aaPredicted RBP27.84■■■□□ 2.05
CHKA-206ENST00000531341 ANXA1P04083 346 aa27.83■■■□□ 2.05
CHKA-206ENST00000531341 NEFMP07197 916 aa27.83■■■□□ 2.05
CHKA-206ENST00000531341 PPP1R42Q7Z4L9 355 aa27.83■■■□□ 2.05
CHKA-206ENST00000531341 NLRP3Q96P20 1036 aa27.83■■■□□ 2.05
CHKA-206ENST00000531341 ATP6V0A2Q9Y487 856 aa27.83■■■□□ 2.05
CHKA-206ENST00000531341 CXCL9Q07325 125 aa27.82■■■□□ 2.04
CHKA-206ENST00000531341 PROSER3Q2NL68 480 aa27.82■■■□□ 2.04
CHKA-206ENST00000531341 SLC10A5Q5PT55 438 aa27.82■■■□□ 2.04
CHKA-206ENST00000531341 GPR101Q96P66 508 aaPredicted RBP27.82■■■□□ 2.04
CHKA-206ENST00000531341 GPRC5DQ9NZD1 345 aa27.82■■■□□ 2.04
CHKA-206ENST00000531341 ABCC4O15439 1325 aa27.82■■■□□ 2.04
CHKA-206ENST00000531341 TLL2Q9Y6L7 1015 aa27.81■■■□□ 2.04
CHKA-206ENST00000531341 AOC2O75106 756 aa27.8■■■□□ 2.04
CHKA-206ENST00000531341 EIF2S2P20042 333 aaKnown RBP27.8■■■□□ 2.04
CHKA-206ENST00000531341 PARP10Q53GL7 1025 aa27.8■■■□□ 2.04
CHKA-206ENST00000531341 UTP14AQ9BVJ6 771 aaKnown RBP27.8■■■□□ 2.04
CHKA-206ENST00000531341 ADARB2Q9NS39 739 aaKnown RBP27.8■■■□□ 2.04
CHKA-206ENST00000531341 THSD7BQ9C0I4 1608 aa27.79■■■□□ 2.04
CHKA-206ENST00000531341 ERBB4Q15303 1308 aa27.79■■■□□ 2.04
CHKA-206ENST00000531341 TSPYL4Q9UJ04 414 aa27.79■■■□□ 2.04
CHKA-206ENST00000531341 TSKSQ9UJT2 592 aa27.79■■■□□ 2.04
CHKA-206ENST00000531341 ECE1P42892 770 aa27.78■■■□□ 2.04
CHKA-206ENST00000531341 GMPSP49915 693 aaPredicted RBP27.78■■■□□ 2.04
CHKA-206ENST00000531341 RTFDC1Q9BY42 306 aaPredicted RBP27.78■■■□□ 2.04
CHKA-206ENST00000531341 ZNRF3Q9ULT6 936 aa27.78■■■□□ 2.04
CHKA-206ENST00000531341 HCLS1P14317 486 aaPredicted RBP27.77■■■□□ 2.04
CHKA-206ENST00000531341 VPS33BQ9H267 617 aa27.77■■■□□ 2.04
CHKA-206ENST00000531341 GLIS2Q9BZE0 524 aaPredicted RBP27.76■■■□□ 2.03
CHKA-206ENST00000531341 HIRAP54198 1017 aaPredicted RBP27.75■■■□□ 2.03
CHKA-206ENST00000531341 SAPCD2Q86UD0 394 aa27.75■■■□□ 2.03
CHKA-206ENST00000531341 ZNF428Q96B54 188 aa27.75■■■□□ 2.03
CHKA-206ENST00000531341 CELF2O95319 508 aaKnown RBP27.74■■■□□ 2.03
CHKA-206ENST00000531341 FAM161AQ3B820 660 aa27.74■■■□□ 2.03
CHKA-206ENST00000531341 DPP8Q6V1X1 898 aaPredicted RBP27.74■■■□□ 2.03
CHKA-206ENST00000531341 SP8Q8IXZ3 490 aa27.74■■■□□ 2.03
CHKA-206ENST00000531341 NECTIN2Q92692 538 aa27.74■■■□□ 2.03
CHKA-206ENST00000531341 TMX4Q9H1E5 349 aaPredicted RBP27.74■■■□□ 2.03
CHKA-206ENST00000531341 MAPK8IP3Q9UPT6 1336 aa27.73■■■□□ 2.03
CHKA-206ENST00000531341 TRPM7Q96QT4 1865 aa27.73■■■□□ 2.03
CHKA-206ENST00000531341 SHTN1A0MZ66 631 aa27.73■■■□□ 2.03
CHKA-206ENST00000531341 RAD17O75943 681 aa27.73■■■□□ 2.03
CHKA-206ENST00000531341 COPS6Q7L5N1 327 aa27.73■■■□□ 2.03
CHKA-206ENST00000531341 NLRP10Q86W26 655 aa27.73■■■□□ 2.03
CHKA-206ENST00000531341 SUPT20HQ8NEM7 779 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms