RNA–Protein interactions for RNA: ENST00000530624.5

CTSB-218, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-218ENST00000530624 GPBP1L1Q9HC44 474 aaPredicted RBP18.61■□□□□ 0.57
CTSB-218ENST00000530624 FER1L6Q2WGJ9 1857 aa18.6■□□□□ 0.57
CTSB-218ENST00000530624 C21orf2O43822 256 aa18.6■□□□□ 0.57
CTSB-218ENST00000530624 FAM9BQ8IZU0 186 aa18.6■□□□□ 0.57
CTSB-218ENST00000530624 TSR2Q969E8 191 aaKnown RBP18.6■□□□□ 0.57
CTSB-218ENST00000530624 ELL2O00472 640 aaPredicted RBP18.59■□□□□ 0.57
CTSB-218ENST00000530624 TSPYL6Q8N831 410 aa18.59■□□□□ 0.57
CTSB-218ENST00000530624 ISCA1Q9BUE6 129 aa18.59■□□□□ 0.57
CTSB-218ENST00000530624 RNF181Q9P0P0 153 aa18.59■□□□□ 0.57
CTSB-218ENST00000530624 PRELPP51888 382 aa18.58■□□□□ 0.56
CTSB-218ENST00000530624 RASSF7Q02833 373 aa18.58■□□□□ 0.56
CTSB-218ENST00000530624 TRIM28Q13263 835 aaKnown RBP18.58■□□□□ 0.56
CTSB-218ENST00000530624 FANCIQ9NVI1 1328 aa18.57■□□□□ 0.56
CTSB-218ENST00000530624 CACNA1SQ13698 1873 aa18.57■□□□□ 0.56
CTSB-218ENST00000530624 TWISTNBQ3B726 338 aaPredicted RBP18.57■□□□□ 0.56
CTSB-218ENST00000530624 SENP3-EIF4A1A0A087X0R7 540 aa18.56■□□□□ 0.56
CTSB-218ENST00000530624 GOLGA2Q08379 1002 aa18.56■□□□□ 0.56
CTSB-218ENST00000530624 NLRP3Q96P20 1036 aa18.56■□□□□ 0.56
CTSB-218ENST00000530624 CRAMP1Q96RY5 1269 aa18.56■□□□□ 0.56
CTSB-218ENST00000530624 PHAXQ9H814 394 aaKnown RBP18.56■□□□□ 0.56
CTSB-218ENST00000530624 SH3TC1Q8TE82 1336 aa18.55■□□□□ 0.56
CTSB-218ENST00000530624 ZNF521Q96K83 1311 aa18.55■□□□□ 0.56
CTSB-218ENST00000530624 CCER2I3L3R5 266 aa18.55■□□□□ 0.56
CTSB-218ENST00000530624 C1QTNF8P60827 252 aa18.55■□□□□ 0.56
CTSB-218ENST00000530624 CCDC93Q567U6 631 aa18.55■□□□□ 0.56
CTSB-218ENST00000530624 RPGRQ92834 1020 aaKnown RBP18.55■□□□□ 0.56
CTSB-218ENST00000530624 TAOK3Q9H2K8 898 aa18.55■□□□□ 0.56
CTSB-218ENST00000530624 SNED1Q8TER0 1413 aa18.55■□□□□ 0.56
CTSB-218ENST00000530624 CC2D2BQ6DHV5 1058 aa18.54■□□□□ 0.56
CTSB-218ENST00000530624 ZNF526Q8TF50 670 aaPredicted RBP18.54■□□□□ 0.56
CTSB-218ENST00000530624 TRMT112Q9UI30 125 aaKnown RBP18.54■□□□□ 0.56
CTSB-218ENST00000530624 DDX58O95786 925 aaKnown RBP18.53■□□□□ 0.56
CTSB-218ENST00000530624 GRIPAP1Q4V328 841 aa18.53■□□□□ 0.56
CTSB-218ENST00000530624 C3orf67Q6ZVT6 689 aa18.53■□□□□ 0.56
CTSB-218ENST00000530624 RIC3Q7Z5B4 369 aa18.53■□□□□ 0.56
CTSB-218ENST00000530624 RTKN2Q8IZC4 609 aa18.53■□□□□ 0.56
CTSB-218ENST00000530624 RBM17Q96I25 401 aaKnown RBP18.53■□□□□ 0.56
CTSB-218ENST00000530624 STK31Q9BXU1 1019 aa18.53■□□□□ 0.56
CTSB-218ENST00000530624 MYH16Q9H6N6 1097 aa18.53■□□□□ 0.56
CTSB-218ENST00000530624 ZNF219Q9P2Y4 722 aaPredicted RBP18.53■□□□□ 0.56
CTSB-218ENST00000530624 SALL2Q9Y467 1007 aaPredicted RBP18.53■□□□□ 0.56
CTSB-218ENST00000530624 DICER1Q9UPY3 1922 aaKnown RBP18.53■□□□□ 0.56
CTSB-218ENST00000530624 KDM2BQ8NHM5 1336 aa18.52■□□□□ 0.56
CTSB-218ENST00000530624 TIAM2Q8IVF5 1701 aa18.52■□□□□ 0.56
CTSB-218ENST00000530624 KIF3CO14782 793 aa18.52■□□□□ 0.56
CTSB-218ENST00000530624 VAMP4O75379 141 aa18.51■□□□□ 0.55
CTSB-218ENST00000530624 FKBP4Q02790 459 aaKnown RBP eCLIP18.51■□□□□ 0.55
CTSB-218ENST00000530624 CCDC191Q8NCU4 936 aa18.51■□□□□ 0.55
CTSB-218ENST00000530624 METTL22Q9BUU2 404 aaPredicted RBP18.51■□□□□ 0.55
CTSB-218ENST00000530624 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
CTSB-218ENST00000530624 CCDC88AQ3V6T2 1871 aa18.51■□□□□ 0.55
CTSB-218ENST00000530624 LAMB2P55268 1798 aa18.5■□□□□ 0.55
CTSB-218ENST00000530624 DDX60Q8IY21 1712 aaKnown RBP18.5■□□□□ 0.55
CTSB-218ENST00000530624 ATP5J2-PTCD1G3V325 749 aa18.5■□□□□ 0.55
CTSB-218ENST00000530624 SYNE4Q8N205 404 aa18.5■□□□□ 0.55
CTSB-218ENST00000530624 PSMD1Q99460 953 aa18.5■□□□□ 0.55
CTSB-218ENST00000530624 GLTPD2A6NH11 291 aa18.49■□□□□ 0.55
CTSB-218ENST00000530624 HCLS1P14317 486 aaPredicted RBP18.49■□□□□ 0.55
CTSB-218ENST00000530624 EXOSC9Q06265 439 aaKnown RBP18.49■□□□□ 0.55
CTSB-218ENST00000530624 KSR2Q6VAB6 950 aa18.49■□□□□ 0.55
CTSB-218ENST00000530624 ZBTB38Q8NAP3 1195 aaPredicted RBP18.49■□□□□ 0.55
CTSB-218ENST00000530624 CACNA1FO60840 1977 aa18.49■□□□□ 0.55
CTSB-218ENST00000530624 PPEF1O14829 653 aaPredicted RBP18.48■□□□□ 0.55
CTSB-218ENST00000530624 SLC4A2P04920 1241 aa18.48■□□□□ 0.55
CTSB-218ENST00000530624 SF3B3Q15393 1217 aaKnown RBP18.48■□□□□ 0.55
CTSB-218ENST00000530624 FAM89AQ96GI7 184 aa18.48■□□□□ 0.55
CTSB-218ENST00000530624 NMRK2Q9NPI5 230 aa18.48■□□□□ 0.55
CTSB-218ENST00000530624 ABCC4O15439 1325 aa18.48■□□□□ 0.55
CTSB-218ENST00000530624 PI4KAP2A4QPH2 592 aa18.47■□□□□ 0.55
CTSB-218ENST00000530624 BBOX1O75936 387 aa18.47■□□□□ 0.55
CTSB-218ENST00000530624 HSP90B1P14625 803 aaKnown RBP18.47■□□□□ 0.55
CTSB-218ENST00000530624 OLFM4Q6UX06 510 aa18.47■□□□□ 0.55
CTSB-218ENST00000530624 PI4KAP1Q8N8J0 262 aa18.47■□□□□ 0.55
CTSB-218ENST00000530624 MYD88Q99836 296 aa18.47■□□□□ 0.55
CTSB-218ENST00000530624 MAP3K2Q9Y2U5 619 aa18.47■□□□□ 0.55
CTSB-218ENST00000530624 FLIIQ13045 1269 aa18.46■□□□□ 0.55
CTSB-218ENST00000530624 DDX46Q7L014 1031 aaKnown RBP18.46■□□□□ 0.55
CTSB-218ENST00000530624 TMC4Q7Z404 712 aa18.46■□□□□ 0.55
CTSB-218ENST00000530624 CWC25Q9NXE8 425 aaPredicted RBP18.46■□□□□ 0.55
CTSB-218ENST00000530624 ATP6V0A2Q9Y487 856 aa18.46■□□□□ 0.55
CTSB-218ENST00000530624 IRS4O14654 1257 aaPredicted RBP18.45■□□□□ 0.54
CTSB-218ENST00000530624 TCERG1O14776 1098 aaKnown RBP18.45■□□□□ 0.54
CTSB-218ENST00000530624 TOMM70O94826 608 aa18.45■□□□□ 0.54
CTSB-218ENST00000530624 PCCAP05165 728 aaPredicted RBP18.45■□□□□ 0.54
CTSB-218ENST00000530624 GRAPQ13588 217 aa18.45■□□□□ 0.54
CTSB-218ENST00000530624 DPY19L2Q6NUT2 758 aa18.45■□□□□ 0.54
CTSB-218ENST00000530624 G2E3Q7L622 706 aa18.45■□□□□ 0.54
CTSB-218ENST00000530624 GRAPLQ8TC17 118 aaPredicted RBP18.45■□□□□ 0.54
CTSB-218ENST00000530624 WDR90Q96KV7 1748 aa18.45■□□□□ 0.54
CTSB-218ENST00000530624 E9PSI1 815 aa18.44■□□□□ 0.54
CTSB-218ENST00000530624 IGKV5-2P06315 115 aa18.44■□□□□ 0.54
CTSB-218ENST00000530624 IARSP41252 1262 aaKnown RBP18.44■□□□□ 0.54
CTSB-218ENST00000530624 NEXNQ0ZGT2 675 aa18.44■□□□□ 0.54
CTSB-218ENST00000530624 SP8Q8IXZ3 490 aa18.44■□□□□ 0.54
CTSB-218ENST00000530624 ZNF277Q9NRM2 450 aaPredicted RBP18.44■□□□□ 0.54
CTSB-218ENST00000530624 RTFDC1Q9BY42 306 aaPredicted RBP18.43■□□□□ 0.54
CTSB-218ENST00000530624 TMX4Q9H1E5 349 aaPredicted RBP18.43■□□□□ 0.54
CTSB-218ENST00000530624 VPS33BQ9H267 617 aa18.43■□□□□ 0.54
CTSB-218ENST00000530624 CDHR2Q9BYE9 1310 aa18.43■□□□□ 0.54
CTSB-218ENST00000530624 RBM46Q8TBY0 533 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms