RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 SLX4Q8IY92 1834 aa21.97■■□□□ 1.11
CCS-205ENST00000530384 SBF1O95248 1867 aa21.96■■□□□ 1.11
CCS-205ENST00000530384 CRY2Q49AN0 593 aa21.96■■□□□ 1.11
CCS-205ENST00000530384 DIEXFQ68CQ4 756 aaKnown RBP21.96■■□□□ 1.11
CCS-205ENST00000530384 PRPF40BQ6NWY9 871 aaKnown RBP21.96■■□□□ 1.11
CCS-205ENST00000530384 RIC3Q7Z5B4 369 aa21.96■■□□□ 1.11
CCS-205ENST00000530384 CACNA1FO60840 1977 aa21.96■■□□□ 1.11
CCS-205ENST00000530384 C21orf2O43822 256 aa21.95■■□□□ 1.1
CCS-205ENST00000530384 DDX58O95786 925 aaKnown RBP21.95■■□□□ 1.1
CCS-205ENST00000530384 ALDH1B1P30837 517 aa21.95■■□□□ 1.1
CCS-205ENST00000530384 SOGA3Q5TF21 947 aa21.95■■□□□ 1.1
CCS-205ENST00000530384 ZNF521Q96K83 1311 aa21.95■■□□□ 1.1
CCS-205ENST00000530384 SLC10A5Q5PT55 438 aa21.94■■□□□ 1.1
CCS-205ENST00000530384 C9orf131Q5VYM1 1079 aa21.94■■□□□ 1.1
CCS-205ENST00000530384 ISCA1Q9BUE6 129 aa21.94■■□□□ 1.1
CCS-205ENST00000530384 SPINK5Q9NQ38 1064 aaPredicted RBP21.94■■□□□ 1.1
CCS-205ENST00000530384 TRMT112Q9UI30 125 aaKnown RBP21.94■■□□□ 1.1
CCS-205ENST00000530384 EXOSC9Q06265 439 aaKnown RBP21.93■■□□□ 1.1
CCS-205ENST00000530384 SH3TC1Q8TE82 1336 aa21.93■■□□□ 1.1
CCS-205ENST00000530384 RPGRQ92834 1020 aaKnown RBP21.93■■□□□ 1.1
CCS-205ENST00000530384 NLRP3Q96P20 1036 aa21.93■■□□□ 1.1
CCS-205ENST00000530384 ZNF219Q9P2Y4 722 aaPredicted RBP21.93■■□□□ 1.1
CCS-205ENST00000530384 FER1L6Q2WGJ9 1857 aa21.92■■□□□ 1.1
CCS-205ENST00000530384 TRIM28Q13263 835 aaKnown RBP21.92■■□□□ 1.1
CCS-205ENST00000530384 RNF181Q9P0P0 153 aa21.92■■□□□ 1.1
CCS-205ENST00000530384 ATP5J2-PTCD1G3V325 749 aa21.91■■□□□ 1.1
CCS-205ENST00000530384 VAMP4O75379 141 aa21.91■■□□□ 1.1
CCS-205ENST00000530384 SLC4A2P04920 1241 aa21.91■■□□□ 1.1
CCS-205ENST00000530384 HOXA10P31260 410 aaPredicted RBP21.91■■□□□ 1.1
CCS-205ENST00000530384 RASSF7Q02833 373 aa21.91■■□□□ 1.1
CCS-205ENST00000530384 RBM17Q96I25 401 aaKnown RBP21.91■■□□□ 1.1
CCS-205ENST00000530384 CCDC88AQ3V6T2 1871 aa21.9■■□□□ 1.1
CCS-205ENST00000530384 NFKBIEO00221 500 aa21.9■■□□□ 1.1
CCS-205ENST00000530384 TCERG1O14776 1098 aaKnown RBP21.9■■□□□ 1.1
CCS-205ENST00000530384 LMNB1P20700 586 aa21.9■■□□□ 1.1
CCS-205ENST00000530384 C7orf43Q8WVR3 580 aa21.9■■□□□ 1.1
CCS-205ENST00000530384 GPBP1L1Q9HC44 474 aaPredicted RBP21.9■■□□□ 1.1
CCS-205ENST00000530384 LTBP3Q9NS15 1303 aa21.89■■□□□ 1.1
CCS-205ENST00000530384 CCDC93Q567U6 631 aa21.89■■□□□ 1.09
CCS-205ENST00000530384 KSR2Q6VAB6 950 aa21.89■■□□□ 1.09
CCS-205ENST00000530384 CRAMP1Q96RY5 1269 aa21.89■■□□□ 1.09
CCS-205ENST00000530384 METTL22Q9BUU2 404 aaPredicted RBP21.89■■□□□ 1.09
CCS-205ENST00000530384 MYD88Q99836 296 aa21.88■■□□□ 1.09
CCS-205ENST00000530384 TAOK3Q9H2K8 898 aa21.88■■□□□ 1.09
CCS-205ENST00000530384 LAMB2P55268 1798 aa21.88■■□□□ 1.09
CCS-205ENST00000530384 ZC3H4Q9UPT8 1303 aaKnown RBP21.87■■□□□ 1.09
CCS-205ENST00000530384 E9PSI1 815 aa21.87■■□□□ 1.09
CCS-205ENST00000530384 HCLS1P14317 486 aaPredicted RBP21.87■■□□□ 1.09
CCS-205ENST00000530384 C3orf67Q6ZVT6 689 aa21.87■■□□□ 1.09
CCS-205ENST00000530384 CCDC191Q8NCU4 936 aa21.87■■□□□ 1.09
CCS-205ENST00000530384 MAP3K2Q9Y2U5 619 aa21.87■■□□□ 1.09
CCS-205ENST00000530384 PI4KAP2A4QPH2 592 aa21.86■■□□□ 1.09
CCS-205ENST00000530384 FLIIQ13045 1269 aa21.86■■□□□ 1.09
CCS-205ENST00000530384 MIER1Q8N108 512 aa21.86■■□□□ 1.09
CCS-205ENST00000530384 SYNE4Q8N205 404 aa21.86■■□□□ 1.09
CCS-205ENST00000530384 PI4KAP1Q8N8J0 262 aa21.86■■□□□ 1.09
CCS-205ENST00000530384 ZNF526Q8TF50 670 aaPredicted RBP21.86■■□□□ 1.09
CCS-205ENST00000530384 FAM89AQ96GI7 184 aa21.86■■□□□ 1.09
CCS-205ENST00000530384 DDX60Q8IY21 1712 aaKnown RBP21.86■■□□□ 1.09
CCS-205ENST00000530384 DICER1Q9UPY3 1922 aaKnown RBP21.85■■□□□ 1.09
CCS-205ENST00000530384 HSP90B1P14625 803 aaKnown RBP21.85■■□□□ 1.09
CCS-205ENST00000530384 NEXNQ0ZGT2 675 aa21.85■■□□□ 1.09
CCS-205ENST00000530384 CC2D2BQ6DHV5 1058 aa21.85■■□□□ 1.09
CCS-205ENST00000530384 G2E3Q7L622 706 aa21.85■■□□□ 1.09
CCS-205ENST00000530384 RTKN2Q8IZC4 609 aa21.85■■□□□ 1.09
CCS-205ENST00000530384 PRELPP51888 382 aa21.84■■□□□ 1.09
CCS-205ENST00000530384 ZBTB38Q8NAP3 1195 aaPredicted RBP21.84■■□□□ 1.09
CCS-205ENST00000530384 ZNF428Q96B54 188 aa21.84■■□□□ 1.09
CCS-205ENST00000530384 CWC25Q9NXE8 425 aaPredicted RBP21.84■■□□□ 1.09
CCS-205ENST00000530384 FKBP5Q13451 457 aaPredicted RBP21.83■■□□□ 1.09
CCS-205ENST00000530384 GRIPAP1Q4V328 841 aa21.83■■□□□ 1.09
CCS-205ENST00000530384 TIAM2Q8IVF5 1701 aa21.83■■□□□ 1.08
CCS-205ENST00000530384 IRS4O14654 1257 aaPredicted RBP21.82■■□□□ 1.08
CCS-205ENST00000530384 PPEF1O14829 653 aaPredicted RBP21.82■■□□□ 1.08
CCS-205ENST00000530384 PCCAP05165 728 aaPredicted RBP21.82■■□□□ 1.08
CCS-205ENST00000530384 FKBP4Q02790 459 aaKnown RBP eCLIP21.82■■□□□ 1.08
CCS-205ENST00000530384 SLFN5Q08AF3 891 aa21.82■■□□□ 1.08
CCS-205ENST00000530384 DDX46Q7L014 1031 aaKnown RBP21.82■■□□□ 1.08
CCS-205ENST00000530384 ABCC4O15439 1325 aa21.81■■□□□ 1.08
CCS-205ENST00000530384 RTL5Q5HYW3 569 aaPredicted RBP21.81■■□□□ 1.08
CCS-205ENST00000530384 OLFM4Q6UX06 510 aa21.81■■□□□ 1.08
CCS-205ENST00000530384 TMX4Q9H1E5 349 aaPredicted RBP21.81■■□□□ 1.08
CCS-205ENST00000530384 KDM2BQ8NHM5 1336 aa21.8■■□□□ 1.08
CCS-205ENST00000530384 BBOX1O75936 387 aa21.8■■□□□ 1.08
CCS-205ENST00000530384 SF3B3Q15393 1217 aaKnown RBP21.8■■□□□ 1.08
CCS-205ENST00000530384 IGKV5-2P06315 115 aa21.79■■□□□ 1.08
CCS-205ENST00000530384 GRAPQ13588 217 aa21.79■■□□□ 1.08
CCS-205ENST00000530384 GRAPLQ8TC17 118 aaPredicted RBP21.79■■□□□ 1.08
CCS-205ENST00000530384 DNAAF4Q8WXU2 420 aa21.79■■□□□ 1.08
CCS-205ENST00000530384 PSMD1Q99460 953 aa21.79■■□□□ 1.08
CCS-205ENST00000530384 ATP6V0A2Q9Y487 856 aa21.78■■□□□ 1.08
CCS-205ENST00000530384 SNED1Q8TER0 1413 aa21.78■■□□□ 1.08
CCS-205ENST00000530384 CDHR2Q9BYE9 1310 aa21.78■■□□□ 1.08
CCS-205ENST00000530384 NEURL1BA8MQ27 555 aa21.77■■□□□ 1.08
CCS-205ENST00000530384 TMC4Q7Z404 712 aa21.77■■□□□ 1.08
CCS-205ENST00000530384 GLTPD2A6NH11 291 aa21.76■■□□□ 1.07
CCS-205ENST00000530384 PDE8AO60658 829 aa21.76■■□□□ 1.07
CCS-205ENST00000530384 CWF19L2Q2TBE0 894 aaKnown RBP21.76■■□□□ 1.07
CCS-205ENST00000530384 DPY19L2Q6NUT2 758 aa21.76■■□□□ 1.07
CCS-205ENST00000530384 CDCA7LQ96GN5 454 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms