RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 ZBTB7AO95365 584 aa8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 A1BGP04217 495 aa8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 WDR63Q8IWG1 891 aa8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 ZNF428Q96B54 188 aa8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 KIF12Q96FN5 646 aa8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 MTFR1LQ9H019 292 aa8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 GZF1Q9H116 711 aaPredicted RBP8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 SPON1Q9HCB6 807 aa8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 MBIPQ9NS73 344 aa8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 ZBTB1Q9Y2K1 713 aa8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 TAF1LQ8IZX4 1826 aa8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 C5P01031 1676 aa8.11□□□□□ -1.11
ATPAF1-209ENST00000529214 UBR2Q8IWV8 1755 aa8.11□□□□□ -1.11
ATPAF1-209ENST00000529214 ST18O60284 1047 aa8.11□□□□□ -1.11
ATPAF1-209ENST00000529214 CANXP27824 592 aaKnown RBP8.11□□□□□ -1.11
ATPAF1-209ENST00000529214 RFC4P35249 363 aa8.11□□□□□ -1.11
ATPAF1-209ENST00000529214 EIF5P55010 431 aaKnown RBP8.11□□□□□ -1.11
ATPAF1-209ENST00000529214 SPNS2Q8IVW8 549 aa8.11□□□□□ -1.11
ATPAF1-209ENST00000529214 DDRGK1Q96HY6 314 aa8.11□□□□□ -1.11
ATPAF1-209ENST00000529214 NAP1L5Q96NT1 182 aaPredicted RBP8.11□□□□□ -1.11
ATPAF1-209ENST00000529214 SRCAPQ6ZRS2 3230 aa8.1□□□□□ -1.11
ATPAF1-209ENST00000529214 SOS1Q07889 1333 aaPredicted RBP8.1□□□□□ -1.11
ATPAF1-209ENST00000529214 IL16Q14005 1332 aa8.1□□□□□ -1.11
ATPAF1-209ENST00000529214 IL6STP40189 918 aaPredicted RBP8.1□□□□□ -1.11
ATPAF1-209ENST00000529214 PTGER2P43116 358 aa8.1□□□□□ -1.11
ATPAF1-209ENST00000529214 CCDC97Q96F63 343 aaPredicted RBP8.1□□□□□ -1.11
ATPAF1-209ENST00000529214 MYH14Q7Z406 1995 aaKnown RBP8.09□□□□□ -1.11
ATPAF1-209ENST00000529214 CICQ96RK0 1608 aaPredicted RBP8.09□□□□□ -1.11
ATPAF1-209ENST00000529214 NBPF26B4DH59 902 aa8.09□□□□□ -1.11
ATPAF1-209ENST00000529214 KRT24Q2M2I5 525 aa8.09□□□□□ -1.11
ATPAF1-209ENST00000529214 NBPF10Q6P3W6 841 aaKnown RBP8.09□□□□□ -1.11
ATPAF1-209ENST00000529214 NLGN1Q8N2Q7 840 aa8.09□□□□□ -1.11
ATPAF1-209ENST00000529214 NBPF15Q8N660 670 aa8.09□□□□□ -1.11
ATPAF1-209ENST00000529214 SERPINA10Q9UK55 444 aa8.09□□□□□ -1.11
ATPAF1-209ENST00000529214 COLQQ9Y215 455 aaPredicted RBP8.09□□□□□ -1.11
ATPAF1-209ENST00000529214 COL5A3P25940 1745 aaPredicted RBP8.09□□□□□ -1.11
ATPAF1-209ENST00000529214 TJP1Q07157 1748 aa8.09□□□□□ -1.11
ATPAF1-209ENST00000529214 ZNF521Q96K83 1311 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 CASZ1Q86V15 1759 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 A0A087WZG4 1122 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 E9PSI1 815 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 ZPR1O75312 459 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 HOXB7P09629 217 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 GYS1P13807 737 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 EIF2S2P20042 333 aaKnown RBP8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 QSER1Q2KHR3 1735 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 GLIPR1L2Q4G1C9 344 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 DUSP27Q5VZP5 1158 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 NARFQ9UHQ1 456 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 KDM3BQ7LBC6 1761 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 USP42Q9H9J4 1324 aaKnown RBP8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 UBR3Q6ZT12 1888 aa8.08□□□□□ -1.12
ATPAF1-209ENST00000529214 ELL2O00472 640 aaPredicted RBP8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 PIP4K2AP48426 406 aaPredicted RBP8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 PDIA6Q15084 440 aa8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 RBM26Q5T8P6 1007 aaKnown RBP8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 USPL1Q5W0Q7 1092 aa8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 MSL1Q68DK7 614 aa8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 C8orf58Q8NAV2 365 aa8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 SLAIN1Q8ND83 568 aa8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 TSR2Q969E8 191 aaKnown RBP8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 SRP68Q9UHB9 627 aaKnown RBP8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 TBC1D2BQ9UPU7 963 aa8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 ERBB4Q15303 1308 aa8.07□□□□□ -1.12
ATPAF1-209ENST00000529214 POLD1P28340 1107 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 TM4SF1P30408 202 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 GOLGA2Q08379 1002 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 LRP10Q7Z4F1 713 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 RETREG2Q8NC44 543 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 BCL2L12Q9HB09 334 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 ZNF330Q9Y3S2 320 aaPredicted RBP8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 COL15A1P39059 1388 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 TUBGCP6Q96RT7 1819 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 CAMTA2O94983 1202 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 MYL6BP14649 208 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 RBM10P98175 930 aaKnown RBP8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 IER5LQ5T953 404 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 HDGFL1Q5TGJ6 251 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 DZIP3Q86Y13 1208 aaKnown RBP8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 TSPYL6Q8N831 410 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 MYH16Q9H6N6 1097 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 DDX21Q9NR30 783 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 PPP1R1BQ9UD71 204 aaPredicted RBP8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 TRPC6Q9Y210 931 aa8.06□□□□□ -1.12
ATPAF1-209ENST00000529214 MMP10P09238 476 aa8.05□□□□□ -1.12
ATPAF1-209ENST00000529214 SLFN5Q08AF3 891 aa8.05□□□□□ -1.12
ATPAF1-209ENST00000529214 PROSER3Q2NL68 480 aa8.05□□□□□ -1.12
ATPAF1-209ENST00000529214 CLEC4GQ6UXB4 293 aa8.05□□□□□ -1.12
ATPAF1-209ENST00000529214 DBF4Q9UBU7 674 aaPredicted RBP8.05□□□□□ -1.12
ATPAF1-209ENST00000529214 FANCIQ9NVI1 1328 aa8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 ERVV-1B6SEH8 477 aa8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 VAMP4O75379 141 aa8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 ANXA1P04083 346 aa8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 EXOSC9Q06265 439 aaKnown RBP8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 NFIXQ14938 502 aa8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 TWISTNBQ3B726 338 aaPredicted RBP8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 CCDC30Q5VVM6 783 aa8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 TTLL7Q6ZT98 887 aa8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 COPS6Q7L5N1 327 aa8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 TRMT2AQ8IZ69 625 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms