RNA–Protein interactions for RNA: ENST00000528846.5

COLCA2-203, Transcript of colorectal cancer associated 2, humanhuman

TSL 3

Gene COLCA2, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-203ENST00000528846 SYNE4Q8N205 404 aa25.7■■□□□ 1.7
COLCA2-203ENST00000528846 HOXA10P31260 410 aaPredicted RBP25.69■■□□□ 1.7
COLCA2-203ENST00000528846 XAGE3Q8WTP9 111 aa25.69■■□□□ 1.7
COLCA2-203ENST00000528846 RBM17Q96I25 401 aaKnown RBP25.69■■□□□ 1.7
COLCA2-203ENST00000528846 UTP14AQ9BVJ6 771 aaKnown RBP25.69■■□□□ 1.7
COLCA2-203ENST00000528846 CCDC88AQ3V6T2 1871 aa25.68■■□□□ 1.7
COLCA2-203ENST00000528846 KLRG1Q96E93 195 aa25.68■■□□□ 1.7
COLCA2-203ENST00000528846 DDX21Q9NR30 783 aaKnown RBP eCLIP25.68■■□□□ 1.7
COLCA2-203ENST00000528846 IARSP41252 1262 aaKnown RBP25.67■■□□□ 1.7
COLCA2-203ENST00000528846 NLRP3Q96P20 1036 aa25.67■■□□□ 1.7
COLCA2-203ENST00000528846 HSP90AB3PQ58FF7 597 aa25.66■■□□□ 1.7
COLCA2-203ENST00000528846 CC2D2BQ6DHV5 1058 aa25.66■■□□□ 1.7
COLCA2-203ENST00000528846 C3orf67Q6ZVT6 689 aa25.66■■□□□ 1.7
COLCA2-203ENST00000528846 CRAMP1Q96RY5 1269 aa25.66■■□□□ 1.7
COLCA2-203ENST00000528846 ARFGEF2Q9Y6D5 1785 aa25.66■■□□□ 1.7
COLCA2-203ENST00000528846 WDR90Q96KV7 1748 aa25.66■■□□□ 1.7
COLCA2-203ENST00000528846 RIC1Q4ADV7 1423 aa25.65■■□□□ 1.7
COLCA2-203ENST00000528846 TCERG1O14776 1098 aaKnown RBP25.65■■□□□ 1.7
COLCA2-203ENST00000528846 SLC10A5Q5PT55 438 aa25.65■■□□□ 1.7
COLCA2-203ENST00000528846 PSMD1Q99460 953 aa25.65■■□□□ 1.7
COLCA2-203ENST00000528846 CACNA1SQ13698 1873 aa25.64■■□□□ 1.7
COLCA2-203ENST00000528846 IQCA1LA6NCM1 817 aa25.64■■□□□ 1.7
COLCA2-203ENST00000528846 HDGFL1Q5TGJ6 251 aa25.64■■□□□ 1.7
COLCA2-203ENST00000528846 CFAP44Q96MT7 982 aa25.64■■□□□ 1.7
COLCA2-203ENST00000528846 CHPF2Q9P2E5 772 aa25.64■■□□□ 1.7
COLCA2-203ENST00000528846 NUP98P52948 1817 aa25.64■■□□□ 1.7
COLCA2-203ENST00000528846 ZNF541Q9H0D2 1346 aa25.63■■□□□ 1.69
COLCA2-203ENST00000528846 PPEF1O14829 653 aaPredicted RBP25.63■■□□□ 1.69
COLCA2-203ENST00000528846 TCIRG1Q13488 830 aa25.63■■□□□ 1.69
COLCA2-203ENST00000528846 CHADLQ6NUI6 762 aa25.63■■□□□ 1.69
COLCA2-203ENST00000528846 NLRP10Q86W26 655 aa25.63■■□□□ 1.69
COLCA2-203ENST00000528846 L3MBTL3Q96JM7 780 aaPredicted RBP25.63■■□□□ 1.69
COLCA2-203ENST00000528846 POTEIP0CG38 1075 aa25.62■■□□□ 1.69
COLCA2-203ENST00000528846 POTEJP0CG39 1038 aa25.62■■□□□ 1.69
COLCA2-203ENST00000528846 GRIPAP1Q4V328 841 aa25.62■■□□□ 1.69
COLCA2-203ENST00000528846 JDP2Q8WYK2 163 aa25.62■■□□□ 1.69
COLCA2-203ENST00000528846 FZD9O00144 591 aa25.61■■□□□ 1.69
COLCA2-203ENST00000528846 APAF1O14727 1248 aa25.61■■□□□ 1.69
COLCA2-203ENST00000528846 HOXB7P09629 217 aa25.61■■□□□ 1.69
COLCA2-203ENST00000528846 TAF1DQ9H5J8 278 aaPredicted RBP25.61■■□□□ 1.69
COLCA2-203ENST00000528846 DICER1Q9UPY3 1922 aaKnown RBP25.61■■□□□ 1.69
COLCA2-203ENST00000528846 CCDC184Q52MB2 194 aa25.6■■□□□ 1.69
COLCA2-203ENST00000528846 DUSP27Q5VZP5 1158 aa25.6■■□□□ 1.69
COLCA2-203ENST00000528846 SLC51AQ86UW1 340 aa25.6■■□□□ 1.69
COLCA2-203ENST00000528846 MRS2Q9HD23 443 aa25.6■■□□□ 1.69
COLCA2-203ENST00000528846 MBIPQ9NS73 344 aa25.6■■□□□ 1.69
COLCA2-203ENST00000528846 DBF4Q9UBU7 674 aaPredicted RBP25.6■■□□□ 1.69
COLCA2-203ENST00000528846 TRMT112Q9UI30 125 aaKnown RBP25.6■■□□□ 1.69
COLCA2-203ENST00000528846 RNF123Q5XPI4 1314 aa25.6■■□□□ 1.69
COLCA2-203ENST00000528846 HCLS1P14317 486 aaPredicted RBP25.59■■□□□ 1.69
COLCA2-203ENST00000528846 JMYQ8N9B5 988 aa25.59■■□□□ 1.69
COLCA2-203ENST00000528846 TMX4Q9H1E5 349 aaPredicted RBP25.59■■□□□ 1.69
COLCA2-203ENST00000528846 SNED1Q8TER0 1413 aa25.59■■□□□ 1.69
COLCA2-203ENST00000528846 IFFO2Q5TF58 517 aa25.58■■□□□ 1.69
COLCA2-203ENST00000528846 ANKRD13DQ6ZTN6 518 aa25.58■■□□□ 1.69
COLCA2-203ENST00000528846 PLBD2Q8NHP8 589 aa25.58■■□□□ 1.69
COLCA2-203ENST00000528846 ZNF428Q96B54 188 aa25.58■■□□□ 1.69
COLCA2-203ENST00000528846 HACL1Q9UJ83 578 aa25.58■■□□□ 1.69
COLCA2-203ENST00000528846 LDHDQ86WU2 507 aa25.57■■□□□ 1.68
COLCA2-203ENST00000528846 ATP6V0A2Q9Y487 856 aa25.57■■□□□ 1.68
COLCA2-203ENST00000528846 ZNF853P0CG23 659 aa25.56■■□□□ 1.68
COLCA2-203ENST00000528846 EIF6P56537 245 aaKnown RBP25.56■■□□□ 1.68
COLCA2-203ENST00000528846 EAPPQ56P03 285 aaPredicted RBP25.56■■□□□ 1.68
COLCA2-203ENST00000528846 GPC2Q8N158 579 aa25.56■■□□□ 1.68
COLCA2-203ENST00000528846 LARGE2Q8N3Y3 721 aa25.56■■□□□ 1.68
COLCA2-203ENST00000528846 ABCC4O15439 1325 aa25.56■■□□□ 1.68
COLCA2-203ENST00000528846 SH3TC1Q8TE82 1336 aa25.56■■□□□ 1.68
COLCA2-203ENST00000528846 CALD1Q05682 793 aaKnown RBP25.55■■□□□ 1.68
COLCA2-203ENST00000528846 IFT57Q9NWB7 429 aa25.55■■□□□ 1.68
COLCA2-203ENST00000528846 HYPKQ9NX55 129 aa25.55■■□□□ 1.68
COLCA2-203ENST00000528846 GJA3Q9Y6H8 435 aa25.55■■□□□ 1.68
COLCA2-203ENST00000528846 CCER2I3L3R5 266 aa25.54■■□□□ 1.68
COLCA2-203ENST00000528846 BBOX1O75936 387 aa25.54■■□□□ 1.68
COLCA2-203ENST00000528846 EPHX2P34913 555 aa25.54■■□□□ 1.68
COLCA2-203ENST00000528846 GNAI1P63096 354 aa25.54■■□□□ 1.68
COLCA2-203ENST00000528846 CLEC11AQ9Y240 323 aa25.54■■□□□ 1.68
COLCA2-203ENST00000528846 DDX46Q7L014 1031 aaKnown RBP25.53■■□□□ 1.68
COLCA2-203ENST00000528846 ATP5J2-PTCD1G3V325 749 aa25.52■■□□□ 1.68
COLCA2-203ENST00000528846 ELL2O00472 640 aaPredicted RBP25.52■■□□□ 1.68
COLCA2-203ENST00000528846 ISCA1Q9BUE6 129 aa25.52■■□□□ 1.68
COLCA2-203ENST00000528846 PPIP5K2O43314 1243 aa25.51■■□□□ 1.67
COLCA2-203ENST00000528846 PNMA8AQ86V59 439 aaPredicted RBP25.51■■□□□ 1.67
COLCA2-203ENST00000528846 SP8Q8IXZ3 490 aa25.51■■□□□ 1.67
COLCA2-203ENST00000528846 NIM1KQ8IY84 436 aa25.51■■□□□ 1.67
COLCA2-203ENST00000528846 AOC3Q16853 763 aa25.5■■□□□ 1.67
COLCA2-203ENST00000528846 MIER1Q8N108 512 aa25.5■■□□□ 1.67
COLCA2-203ENST00000528846 FAM89AQ96GI7 184 aa25.5■■□□□ 1.67
COLCA2-203ENST00000528846 CREBZFQ9NS37 354 aa25.5■■□□□ 1.67
COLCA2-203ENST00000528846 GRAPQ13588 217 aa25.49■■□□□ 1.67
COLCA2-203ENST00000528846 DPP8Q6V1X1 898 aaPredicted RBP25.49■■□□□ 1.67
COLCA2-203ENST00000528846 SUPT20HQ8NEM7 779 aa25.49■■□□□ 1.67
COLCA2-203ENST00000528846 GRAPLQ8TC17 118 aaPredicted RBP25.49■■□□□ 1.67
COLCA2-203ENST00000528846 VPS33BQ9H267 617 aa25.49■■□□□ 1.67
COLCA2-203ENST00000528846 COL4A5P29400 1685 aa25.48■■□□□ 1.67
COLCA2-203ENST00000528846 RIC3Q7Z5B4 369 aa25.48■■□□□ 1.67
COLCA2-203ENST00000528846 MPNDQ8N594 471 aa25.48■■□□□ 1.67
COLCA2-203ENST00000528846 RTFDC1Q9BY42 306 aaPredicted RBP25.48■■□□□ 1.67
COLCA2-203ENST00000528846 PASKQ96RG2 1323 aa25.47■■□□□ 1.67
COLCA2-203ENST00000528846 ITGBL1O95965 494 aaPredicted RBP25.47■■□□□ 1.67
COLCA2-203ENST00000528846 LMOD1P29536 600 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms