RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 MIGA1Q8NAN2 632 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 RNF41Q9H4P4 317 aaPredicted RBP12.11□□□□□ -0.47
CTSC-203ENST00000524463 POLD1P28340 1107 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 GJB2P29033 226 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 METAP2P50579 478 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTSC-203ENST00000524463 HOOK3Q86VS8 718 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 IL27Q8NEV9 243 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 TOP1P11387 765 aaKnown RBP12.1□□□□□ -0.47
CTSC-203ENST00000524463 HOMER2Q9NSB8 354 aa12.1□□□□□ -0.47
CTSC-203ENST00000524463 PHACTR2O75167 634 aa12.1□□□□□ -0.47
CTSC-203ENST00000524463 SAP30BPQ9UHR5 308 aaKnown RBP12.1□□□□□ -0.47
CTSC-203ENST00000524463 HFM1A2PYH4 1435 aa12.1□□□□□ -0.47
CTSC-203ENST00000524463 ACEP12821 1306 aa12.1□□□□□ -0.47
CTSC-203ENST00000524463 KIF4BQ2VIQ3 1234 aa12.1□□□□□ -0.47
CTSC-203ENST00000524463 UIMC1Q96RL1 719 aa12.1□□□□□ -0.47
CTSC-203ENST00000524463 CRNKL1Q9BZJ0 848 aaKnown RBP12.1□□□□□ -0.47
CTSC-203ENST00000524463 PABPN1LA6NDY0 278 aaKnown RBP12.1□□□□□ -0.47
CTSC-203ENST00000524463 SLFN5Q08AF3 891 aa12.1□□□□□ -0.47
CTSC-203ENST00000524463 ZCRB1Q8TBF4 217 aaKnown RBP12.1□□□□□ -0.47
CTSC-203ENST00000524463 URI1O94763 535 aaPredicted RBP12.1□□□□□ -0.47
CTSC-203ENST00000524463 ZFP91Q96JP5 570 aaPredicted RBP12.1□□□□□ -0.47
CTSC-203ENST00000524463 IARSP41252 1262 aaKnown RBP12.09□□□□□ -0.47
CTSC-203ENST00000524463 CHST3Q7LGC8 479 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 NECAB1Q8N987 351 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 RPGRIP1LQ68CZ1 1315 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 GOLGA6L7A0A1B0GV03 622 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 VPS36Q86VN1 386 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 ERICH3Q5RHP9 1530 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 SMC1AQ14683 1233 aaKnown RBP12.09□□□□□ -0.47
CTSC-203ENST00000524463 SIRT1Q96EB6 747 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 PLIN2Q99541 437 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 TCP11L1Q9NUJ3 509 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 DAPK1P53355 1430 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 TOM1O60784 492 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 TBCAO75347 108 aaKnown RBP12.09□□□□□ -0.47
CTSC-203ENST00000524463 XAGE3Q8WTP9 111 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 NSFL1CQ9UNZ2 370 aaKnown RBP12.09□□□□□ -0.47
CTSC-203ENST00000524463 LDHCP07864 332 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 IDI1Q13907 227 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 DDB1Q16531 1140 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 MRVI1Q9Y6F6 885 aa12.09□□□□□ -0.47
CTSC-203ENST00000524463 FAM170AA1A519 330 aa12.08□□□□□ -0.48
CTSC-203ENST00000524463 ZSWIM4Q9H7M6 989 aa12.08□□□□□ -0.48
CTSC-203ENST00000524463 EIF3JO75822 258 aaKnown RBP12.08□□□□□ -0.48
CTSC-203ENST00000524463 HLTFQ14527 1009 aaKnown RBP eCLIP12.08□□□□□ -0.48
CTSC-203ENST00000524463 IFIT1BQ5T764 474 aaKnown RBP12.08□□□□□ -0.48
CTSC-203ENST00000524463 TCHPQ9BT92 498 aa12.08□□□□□ -0.48
CTSC-203ENST00000524463 SRRTQ9BXP5 876 aaKnown RBP12.08□□□□□ -0.48
CTSC-203ENST00000524463 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
CTSC-203ENST00000524463 SSFA2P28290 1259 aa12.08□□□□□ -0.48
CTSC-203ENST00000524463 ZYXQ15942 572 aaKnown RBP12.08□□□□□ -0.48
CTSC-203ENST00000524463 CCDC174Q6PII3 467 aa12.08□□□□□ -0.48
CTSC-203ENST00000524463 KIF5BP33176 963 aa12.08□□□□□ -0.48
CTSC-203ENST00000524463 ARID5AQ03989 594 aa12.08□□□□□ -0.48
CTSC-203ENST00000524463 MPHOSPH6Q99547 160 aaKnown RBP12.08□□□□□ -0.48
CTSC-203ENST00000524463 RNF216Q9NWF9 866 aaPredicted RBP12.08□□□□□ -0.48
CTSC-203ENST00000524463 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
CTSC-203ENST00000524463 LRPPRCP42704 1394 aaKnown RBP12.08□□□□□ -0.48
CTSC-203ENST00000524463 TMC6Q7Z403 805 aa12.08□□□□□ -0.48
CTSC-203ENST00000524463 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
CTSC-203ENST00000524463 MSH6P52701 1360 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 KIF5CO60282 957 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 SMARCC2Q8TAQ2 1214 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 ZMYND15Q9H091 742 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 ARAP1Q96P48 1450 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 NF2P35240 595 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 TTF1Q15361 905 aaPredicted RBP12.07□□□□□ -0.48
CTSC-203ENST00000524463 GRIPAP1Q4V328 841 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 EP400NLQ6ZTU2 488 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 MBIPQ9NS73 344 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 ORC3Q9UBD5 711 aaPredicted RBP12.07□□□□□ -0.48
CTSC-203ENST00000524463 PLEKHH2Q8IVE3 1493 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 SNRPA1P09661 255 aaKnown RBP12.07□□□□□ -0.48
CTSC-203ENST00000524463 SFPQP23246 707 aaKnown RBP eCLIP12.07□□□□□ -0.48
CTSC-203ENST00000524463 EIF6P56537 245 aaKnown RBP12.07□□□□□ -0.48
CTSC-203ENST00000524463 COPS6Q7L5N1 327 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
CTSC-203ENST00000524463 HARSP12081 509 aaKnown RBP12.07□□□□□ -0.48
CTSC-203ENST00000524463 RXRAP19793 462 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 TAF12Q16514 161 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 JDP2Q8WYK2 163 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 CRACR2AQ9BSW2 395 aa12.07□□□□□ -0.48
CTSC-203ENST00000524463 UTP14AQ9BVJ6 771 aaKnown RBP12.07□□□□□ -0.48
CTSC-203ENST00000524463 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
CTSC-203ENST00000524463 GSTO1P78417 241 aa12.06□□□□□ -0.48
CTSC-203ENST00000524463 TMCO3Q6UWJ1 677 aa12.06□□□□□ -0.48
CTSC-203ENST00000524463 PA2G4Q9UQ80 394 aaKnown RBP12.06□□□□□ -0.48
CTSC-203ENST00000524463 DMRT2Q9Y5R5 561 aa12.06□□□□□ -0.48
CTSC-203ENST00000524463 LMOD1P29536 600 aaPredicted RBP12.06□□□□□ -0.48
CTSC-203ENST00000524463 UBA7P41226 1012 aa12.06□□□□□ -0.48
CTSC-203ENST00000524463 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
CTSC-203ENST00000524463 NLRP3Q96P20 1036 aa12.06□□□□□ -0.48
CTSC-203ENST00000524463 PHAXQ9H814 394 aaKnown RBP12.06□□□□□ -0.48
CTSC-203ENST00000524463 RARSP54136 660 aaKnown RBP12.06□□□□□ -0.48
CTSC-203ENST00000524463 WTAPQ15007 396 aa12.06□□□□□ -0.48
CTSC-203ENST00000524463 EXOC1Q9NV70 894 aa12.06□□□□□ -0.48
CTSC-203ENST00000524463 ANO10Q9NW15 660 aa12.06□□□□□ -0.48
CTSC-203ENST00000524463 KLF18A0A0U1RQI7 1052 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 POLR3GO15318 223 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms