RNA–Protein interactions for RNA: ENST00000523313.1

CASC9-204, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-204ENST00000523313 HIRAP54198 1017 aaPredicted RBP11.42□□□□□ -0.58
CASC9-204ENST00000523313 SULT6B1Q6IMI4 303 aa11.42□□□□□ -0.58
CASC9-204ENST00000523313 RGMBQ6NW40 437 aa11.42□□□□□ -0.58
CASC9-204ENST00000523313 A1BGP04217 495 aa11.41□□□□□ -0.58
CASC9-204ENST00000523313 IL6STP40189 918 aaPredicted RBP11.41□□□□□ -0.58
CASC9-204ENST00000523313 CDC37L1Q7L3B6 337 aa11.41□□□□□ -0.58
CASC9-204ENST00000523313 TRPM4Q8TD43 1214 aa11.41□□□□□ -0.58
CASC9-204ENST00000523313 CSRNP1Q96S65 589 aa11.41□□□□□ -0.58
CASC9-204ENST00000523313 MKI67P46013 3256 aaKnown RBP11.41□□□□□ -0.58
CASC9-204ENST00000523313 FAM177BA6PVY3 158 aa11.4□□□□□ -0.58
CASC9-204ENST00000523313 ALDH1B1P30837 517 aa11.4□□□□□ -0.58
CASC9-204ENST00000523313 GMPSP49915 693 aaPredicted RBP11.4□□□□□ -0.58
CASC9-204ENST00000523313 PKN2Q16513 984 aaKnown RBP11.4□□□□□ -0.58
CASC9-204ENST00000523313 USP48Q86UV5 1035 aa11.4□□□□□ -0.58
CASC9-204ENST00000523313 DZIP3Q86Y13 1208 aaKnown RBP11.4□□□□□ -0.58
CASC9-204ENST00000523313 NIM1KQ8IY84 436 aa11.4□□□□□ -0.58
CASC9-204ENST00000523313 UBR2Q8IWV8 1755 aa11.39□□□□□ -0.59
CASC9-204ENST00000523313 ZNF157P51786 506 aaPredicted RBP11.39□□□□□ -0.59
CASC9-204ENST00000523313 CCDC102AQ96A19 550 aa11.39□□□□□ -0.59
CASC9-204ENST00000523313 ZNF496Q96IT1 587 aaPredicted RBP11.39□□□□□ -0.59
CASC9-204ENST00000523313 HDAC9Q9UKV0 1011 aa11.39□□□□□ -0.59
CASC9-204ENST00000523313 COLQQ9Y215 455 aaPredicted RBP11.39□□□□□ -0.59
CASC9-204ENST00000523313 NPC1L1Q9UHC9 1359 aa11.39□□□□□ -0.59
CASC9-204ENST00000523313 SHTN1A0MZ66 631 aa11.38□□□□□ -0.59
CASC9-204ENST00000523313 PIP4K2AP48426 406 aaPredicted RBP11.38□□□□□ -0.59
CASC9-204ENST00000523313 CXCL9Q07325 125 aa11.38□□□□□ -0.59
CASC9-204ENST00000523313 TTC5Q8N0Z6 440 aa11.38□□□□□ -0.59
CASC9-204ENST00000523313 SLC17A8Q8NDX2 589 aa11.38□□□□□ -0.59
CASC9-204ENST00000523313 ZC3H15Q8WU90 426 aaKnown RBP11.38□□□□□ -0.59
CASC9-204ENST00000523313 ZNF296Q8WUU4 475 aaPredicted RBP11.38□□□□□ -0.59
CASC9-204ENST00000523313 GBA2Q9HCG7 927 aaPredicted RBP11.38□□□□□ -0.59
CASC9-204ENST00000523313 HEG1Q9ULI3 1381 aa11.38□□□□□ -0.59
CASC9-204ENST00000523313 POTEFA5A3E0 1075 aa11.37□□□□□ -0.59
CASC9-204ENST00000523313 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
CASC9-204ENST00000523313 PPIP5K2O43314 1243 aa11.37□□□□□ -0.59
CASC9-204ENST00000523313 SLC10A3P09131 477 aa11.37□□□□□ -0.59
CASC9-204ENST00000523313 AOC3Q16853 763 aa11.37□□□□□ -0.59
CASC9-204ENST00000523313 TPTE2Q6XPS3 522 aa11.37□□□□□ -0.59
CASC9-204ENST00000523313 NPM2Q86SE8 214 aaKnown RBP11.37□□□□□ -0.59
CASC9-204ENST00000523313 CC2D2BQ6DHV5 1058 aa11.36□□□□□ -0.59
CASC9-204ENST00000523313 FBXO46Q6PJ61 603 aaPredicted RBP11.36□□□□□ -0.59
CASC9-204ENST00000523313 C2orf69Q8N8R5 385 aa11.36□□□□□ -0.59
CASC9-204ENST00000523313 NIP7Q9Y221 180 aaKnown RBP eCLIP11.36□□□□□ -0.59
CASC9-204ENST00000523313 AKAP11Q9UKA4 1901 aa11.35□□□□□ -0.59
CASC9-204ENST00000523313 SZT2Q5T011 3432 aa11.35□□□□□ -0.59
CASC9-204ENST00000523313 ADM5C9JUS6 153 aa11.35□□□□□ -0.59
CASC9-204ENST00000523313 TBC1D8O95759 1140 aa11.35□□□□□ -0.59
CASC9-204ENST00000523313 TEX13AQ9BXU3 409 aaPredicted RBP11.35□□□□□ -0.59
CASC9-204ENST00000523313 ABCC12Q96J65 1359 aa11.35□□□□□ -0.59
CASC9-204ENST00000523313 RAD17O75943 681 aa11.34□□□□□ -0.59
CASC9-204ENST00000523313 CRY2Q49AN0 593 aa11.34□□□□□ -0.59
CASC9-204ENST00000523313 CDCA8Q53HL2 280 aa11.34□□□□□ -0.59
CASC9-204ENST00000523313 ZNF790Q6PG37 636 aa11.34□□□□□ -0.59
CASC9-204ENST00000523313 CLEC4GQ6UXB4 293 aa11.34□□□□□ -0.59
CASC9-204ENST00000523313 KRT26Q7Z3Y9 468 aa11.34□□□□□ -0.59
CASC9-204ENST00000523313 BCL2L13Q9BXK5 485 aa11.34□□□□□ -0.59
CASC9-204ENST00000523313 ZNRF3Q9ULT6 936 aa11.34□□□□□ -0.59
CASC9-204ENST00000523313 IL13P35225 146 aa11.33□□□□□ -0.6
CASC9-204ENST00000523313 MTHFSDQ2M296 383 aaKnown RBP11.33□□□□□ -0.6
CASC9-204ENST00000523313 RASAL3Q86YV0 1011 aa11.33□□□□□ -0.6
CASC9-204ENST00000523313 CNOT7Q9UIV1 285 aaKnown RBP11.33□□□□□ -0.6
CASC9-204ENST00000523313 ZNF652Q9Y2D9 606 aa11.33□□□□□ -0.6
CASC9-204ENST00000523313 CDHR2Q9BYE9 1310 aa11.33□□□□□ -0.6
CASC9-204ENST00000523313 PPEF1O14829 653 aaPredicted RBP11.32□□□□□ -0.6
CASC9-204ENST00000523313 KCNA4P22459 653 aa11.32□□□□□ -0.6
CASC9-204ENST00000523313 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
CASC9-204ENST00000523313 SAMD7Q7Z3H4 446 aa11.32□□□□□ -0.6
CASC9-204ENST00000523313 NUTM1Q86Y26 1132 aa11.32□□□□□ -0.6
CASC9-204ENST00000523313 GPR25O00155 361 aa11.31□□□□□ -0.6
CASC9-204ENST00000523313 KCNQ3O43525 872 aa11.31□□□□□ -0.6
CASC9-204ENST00000523313 EGFRP00533 1210 aa11.31□□□□□ -0.6
CASC9-204ENST00000523313 HMOX1P09601 288 aa11.31□□□□□ -0.6
CASC9-204ENST00000523313 GRIPAP1Q4V328 841 aa11.31□□□□□ -0.6
CASC9-204ENST00000523313 MICALL2Q8IY33 904 aa11.31□□□□□ -0.6
CASC9-204ENST00000523313 RPGRQ92834 1020 aaKnown RBP11.31□□□□□ -0.6
CASC9-204ENST00000523313 USP16Q9Y5T5 823 aa11.31□□□□□ -0.6
CASC9-204ENST00000523313 PRAMEF22A3QJZ6 481 aa11.3□□□□□ -0.6
CASC9-204ENST00000523313 H7C1D1 291 aa11.3□□□□□ -0.6
CASC9-204ENST00000523313 EN2P19622 333 aaPredicted RBP11.3□□□□□ -0.6
CASC9-204ENST00000523313 HOXA10P31260 410 aaPredicted RBP11.3□□□□□ -0.6
CASC9-204ENST00000523313 HLFQ16534 295 aa11.3□□□□□ -0.6
CASC9-204ENST00000523313 TBC1D10BQ4KMP7 808 aaPredicted RBP11.3□□□□□ -0.6
CASC9-204ENST00000523313 FMNL2Q96PY5 1086 aa11.3□□□□□ -0.6
CASC9-204ENST00000523313 ZBTB12Q9Y330 459 aaPredicted RBP11.3□□□□□ -0.6
CASC9-204ENST00000523313 RIC1Q4ADV7 1423 aa11.29□□□□□ -0.6
CASC9-204ENST00000523313 TNIP1Q15025 636 aa11.29□□□□□ -0.6
CASC9-204ENST00000523313 REM2Q8IYK8 340 aaPredicted RBP11.29□□□□□ -0.6
CASC9-204ENST00000523313 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
CASC9-204ENST00000523313 HTTP42858 3142 aa11.29□□□□□ -0.6
CASC9-204ENST00000523313 YDJCA8MPS7 323 aa11.28□□□□□ -0.6
CASC9-204ENST00000523313 TEFQ10587 303 aa11.28□□□□□ -0.6
CASC9-204ENST00000523313 RBM26Q5T8P6 1007 aaKnown RBP11.28□□□□□ -0.6
CASC9-204ENST00000523313 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
CASC9-204ENST00000523313 IL17REQ8NFR9 667 aa11.28□□□□□ -0.6
CASC9-204ENST00000523313 DCPSQ96C86 337 aaKnown RBP11.28□□□□□ -0.6
CASC9-204ENST00000523313 CRAMP1Q96RY5 1269 aa11.28□□□□□ -0.6
CASC9-204ENST00000523313 VPS33BQ9H267 617 aa11.28□□□□□ -0.6
CASC9-204ENST00000523313 R3HDMLQ9H3Y0 253 aa11.28□□□□□ -0.6
CASC9-204ENST00000523313 KIF7Q2M1P5 1343 aa11.28□□□□□ -0.6
CASC9-204ENST00000523313 PAPPA2Q9BXP8 1791 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms