RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 IL27Q8NEV9 243 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 CABLES1Q8TDN4 633 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 JDP2Q8WYK2 163 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 PYM1Q9BRP8 204 aaKnown RBP18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 STX8Q9UNK0 236 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 GRM8O00222 908 aa18.81■□□□□ 0.6
PCDHA3-201ENST00000522353 GCP02774 474 aa18.81■□□□□ 0.6
PCDHA3-201ENST00000522353 ARHGAP29Q52LW3 1261 aa18.81■□□□□ 0.6
PCDHA3-201ENST00000522353 DCAF5Q96JK2 942 aa18.81■□□□□ 0.6
PCDHA3-201ENST00000522353 NUP160Q12769 1436 aa18.81■□□□□ 0.6
PCDHA3-201ENST00000522353 RHPN1Q8TCX5 695 aa18.81■□□□□ 0.6
PCDHA3-201ENST00000522353 VAT1LQ9HCJ6 419 aa18.81■□□□□ 0.6
PCDHA3-201ENST00000522353 CYP7A1P22680 504 aa18.8■□□□□ 0.6
PCDHA3-201ENST00000522353 CACNA2D4Q7Z3S7 1137 aa18.8■□□□□ 0.6
PCDHA3-201ENST00000522353 NCKAP5LQ9HCH0 1330 aa18.8■□□□□ 0.6
PCDHA3-201ENST00000522353 TMTC2Q8N394 836 aa18.8■□□□□ 0.6
PCDHA3-201ENST00000522353 LMBR1LQ6UX01 489 aa18.8■□□□□ 0.6
PCDHA3-201ENST00000522353 KRT23Q9C075 422 aa18.8■□□□□ 0.6
PCDHA3-201ENST00000522353 CLEC11AQ9Y240 323 aa18.8■□□□□ 0.6
PCDHA3-201ENST00000522353 GUCY1B3Q02153 619 aa18.8■□□□□ 0.6
PCDHA3-201ENST00000522353 EIF4A2Q14240 407 aaKnown RBP18.8■□□□□ 0.6
PCDHA3-201ENST00000522353 NEK1Q96PY6 1258 aa18.8■□□□□ 0.6
PCDHA3-201ENST00000522353 SPA17Q15506 151 aa18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 METAP2P50579 478 aaKnown RBP eCLIP18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 CCT2P78371 535 aaKnown RBP18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 KLHL10Q6JEL2 608 aa18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 MICU3Q86XE3 530 aa18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 ZMYM3Q14202 1370 aa18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 CTAGE5O15320 804 aa18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 LEKR1Q6ZMV7 388 aa18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 JARID2Q92833 1246 aaPredicted RBP18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 EYA3Q99504 573 aa18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 NAA16Q6N069 864 aaPredicted RBP18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 ESR2Q92731 530 aa18.79■□□□□ 0.6
PCDHA3-201ENST00000522353 CCDC66A2RUB6 948 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 MCM5P33992 734 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 GNAQP50148 359 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 HAND2P61296 217 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 TRPM2O94759 1503 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 TSPY3P0CV98 308 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 TSPY8P0CW00 308 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 FBLN1P23142 703 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 UBA7P41226 1012 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 BMP2KLQ5H9B9 411 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 KCNA6P17658 529 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 LINS1Q8NG48 757 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 LRRC27Q9C0I9 530 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 CNNM2Q9H8M5 875 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 ORC3Q9UBD5 711 aaPredicted RBP18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 SAMM50Q9Y512 469 aa18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 EIF3JO75822 258 aaKnown RBP18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 FAM177A1Q8N128 213 aaPredicted RBP18.78■□□□□ 0.6
PCDHA3-201ENST00000522353 PLCG2P16885 1265 aa18.77■□□□□ 0.6
PCDHA3-201ENST00000522353 CNNM3Q8NE01 707 aa18.77■□□□□ 0.6
PCDHA3-201ENST00000522353 PCDH11XQ9BZA7 1347 aa18.77■□□□□ 0.6
PCDHA3-201ENST00000522353 PCDH11YQ9BZA8 1340 aa18.77■□□□□ 0.6
PCDHA3-201ENST00000522353 SYCP2Q9BX26 1530 aa18.77■□□□□ 0.6
PCDHA3-201ENST00000522353 C20orf194Q5TEA3 1177 aa18.77■□□□□ 0.6
PCDHA3-201ENST00000522353 WTAPQ15007 396 aa18.77■□□□□ 0.59
PCDHA3-201ENST00000522353 ANKRD62A6NC57 917 aa18.76■□□□□ 0.59
PCDHA3-201ENST00000522353 NFATC2IPQ8NCF5 419 aa18.76■□□□□ 0.59
PCDHA3-201ENST00000522353 BRPF3Q9ULD4 1205 aa18.76■□□□□ 0.59
PCDHA3-201ENST00000522353 TSPYL1Q9H0U9 437 aa18.76■□□□□ 0.59
PCDHA3-201ENST00000522353 NPATQ14207 1427 aa18.76■□□□□ 0.59
PCDHA3-201ENST00000522353 B4DLN1 442 aa18.76■□□□□ 0.59
PCDHA3-201ENST00000522353 IDEP14735 1019 aa18.76■□□□□ 0.59
PCDHA3-201ENST00000522353 MRPL12P52815 198 aaKnown RBP18.76■□□□□ 0.59
PCDHA3-201ENST00000522353 TRAPPC8Q9Y2L5 1435 aa18.75■□□□□ 0.59
PCDHA3-201ENST00000522353 SPDYE4A6NLX3 237 aa18.75■□□□□ 0.59
PCDHA3-201ENST00000522353 F8W031 263 aaPredicted RBP18.75■□□□□ 0.59
PCDHA3-201ENST00000522353 ERMNQ8TAM6 284 aa18.75■□□□□ 0.59
PCDHA3-201ENST00000522353 ANKRD2Q9GZV1 360 aa18.75■□□□□ 0.59
PCDHA3-201ENST00000522353 NSFL1CQ9UNZ2 370 aaKnown RBP18.75■□□□□ 0.59
PCDHA3-201ENST00000522353 SFPQP23246 707 aaKnown RBP eCLIP18.75■□□□□ 0.59
PCDHA3-201ENST00000522353 CAMK4Q16566 473 aa18.75■□□□□ 0.59
PCDHA3-201ENST00000522353 CCDC148Q8NFR7 591 aa18.75■□□□□ 0.59
PCDHA3-201ENST00000522353 POLKQ9UBT6 870 aa18.75■□□□□ 0.59
PCDHA3-201ENST00000522353 SLC4A4Q9Y6R1 1079 aa18.75■□□□□ 0.59
PCDHA3-201ENST00000522353 EZRP15311 586 aaKnown RBP18.74■□□□□ 0.59
PCDHA3-201ENST00000522353 KIF2AO00139 706 aaPredicted RBP18.74■□□□□ 0.59
PCDHA3-201ENST00000522353 BIVM-ERCC5R4GMW8 1640 aa18.74■□□□□ 0.59
PCDHA3-201ENST00000522353 LIG1P18858 919 aa18.74■□□□□ 0.59
PCDHA3-201ENST00000522353 BTG4Q9NY30 223 aa18.74■□□□□ 0.59
PCDHA3-201ENST00000522353 NUP153P49790 1475 aaKnown RBP18.74■□□□□ 0.59
PCDHA3-201ENST00000522353 SLC26A6Q9BXS9 759 aa18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 IQSEC3Q9UPP2 1182 aaPredicted RBP18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 BMP15O95972 392 aa18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 MTHFSDQ2M296 383 aaKnown RBP18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 CCDC183Q5T5S1 534 aa18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 IP6K1Q92551 441 aa18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 STK32BQ9NY57 414 aa18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 TRAPPC3LQ5T215 181 aa18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 C16orf71Q8IYS4 520 aaPredicted RBP18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 KANK3Q6NY19 840 aa18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 CCDC144CPQ8IYA2 1237 aa18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 MEIS3Q99687 375 aa18.73■□□□□ 0.59
PCDHA3-201ENST00000522353 UHRF1BP1Q6BDS2 1440 aa18.72■□□□□ 0.59
PCDHA3-201ENST00000522353 SYCE3A1L190 88 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms