RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 TAOK3Q9H2K8 898 aa22.13■■□□□ 1.13
SQLE-205ENST00000521232 CEP350Q5VT06 3117 aa22.13■■□□□ 1.13
SQLE-205ENST00000521232 DICER1Q9UPY3 1922 aaKnown RBP22.12■■□□□ 1.13
SQLE-205ENST00000521232 TNRC6CQ9HCJ0 1690 aaKnown RBP22.12■■□□□ 1.13
SQLE-205ENST00000521232 HOXA10P31260 410 aaPredicted RBP22.12■■□□□ 1.13
SQLE-205ENST00000521232 UTP14AQ9BVJ6 771 aaKnown RBP22.12■■□□□ 1.13
SQLE-205ENST00000521232 HYPKQ9NX55 129 aa22.12■■□□□ 1.13
SQLE-205ENST00000521232 TOMM70O94826 608 aa22.11■■□□□ 1.13
SQLE-205ENST00000521232 CCDC93Q567U6 631 aa22.11■■□□□ 1.13
SQLE-205ENST00000521232 ANKRD13DQ6ZTN6 518 aa22.11■■□□□ 1.13
SQLE-205ENST00000521232 NLRP10Q86W26 655 aa22.11■■□□□ 1.13
SQLE-205ENST00000521232 WWC1Q8IX03 1113 aa22.11■■□□□ 1.13
SQLE-205ENST00000521232 PLBD2Q8NHP8 589 aa22.11■■□□□ 1.13
SQLE-205ENST00000521232 ANKRD36CQ5JPF3 1778 aa22.11■■□□□ 1.13
SQLE-205ENST00000521232 RNF123Q5XPI4 1314 aa22.1■■□□□ 1.13
SQLE-205ENST00000521232 GLTPD2A6NH11 291 aa22.1■■□□□ 1.13
SQLE-205ENST00000521232 ELL2O00472 640 aaPredicted RBP22.1■■□□□ 1.13
SQLE-205ENST00000521232 C8orf58Q8NAV2 365 aa22.1■■□□□ 1.13
SQLE-205ENST00000521232 NLRP3Q96P20 1036 aa22.09■■□□□ 1.13
SQLE-205ENST00000521232 RRAGCQ9HB90 399 aa22.09■■□□□ 1.13
SQLE-205ENST00000521232 RTKN2Q8IZC4 609 aa22.08■■□□□ 1.13
SQLE-205ENST00000521232 RPGRQ92834 1020 aaKnown RBP22.08■■□□□ 1.13
SQLE-205ENST00000521232 CRAMP1Q96RY5 1269 aa22.08■■□□□ 1.13
SQLE-205ENST00000521232 CHMP4AQ9BY43 222 aa22.08■■□□□ 1.13
SQLE-205ENST00000521232 TIAM2Q8IVF5 1701 aa22.07■■□□□ 1.12
SQLE-205ENST00000521232 FKBP4Q02790 459 aaKnown RBP eCLIP22.07■■□□□ 1.12
SQLE-205ENST00000521232 OLFM4Q6UX06 510 aa22.07■■□□□ 1.12
SQLE-205ENST00000521232 C3orf67Q6ZVT6 689 aa22.07■■□□□ 1.12
SQLE-205ENST00000521232 RBM17Q96I25 401 aaKnown RBP22.07■■□□□ 1.12
SQLE-205ENST00000521232 ISCA1Q9BUE6 129 aa22.06■■□□□ 1.12
SQLE-205ENST00000521232 IL16Q14005 1332 aa22.06■■□□□ 1.12
SQLE-205ENST00000521232 HSPA6P17066 643 aa22.05■■□□□ 1.12
SQLE-205ENST00000521232 CC2D2BQ6DHV5 1058 aa22.05■■□□□ 1.12
SQLE-205ENST00000521232 DPY19L2Q6NUT2 758 aa22.05■■□□□ 1.12
SQLE-205ENST00000521232 TRMT112Q9UI30 125 aaKnown RBP22.05■■□□□ 1.12
SQLE-205ENST00000521232 CCDC30Q5VVM6 783 aa22.04■■□□□ 1.12
SQLE-205ENST00000521232 C16orf71Q8IYS4 520 aaPredicted RBP22.04■■□□□ 1.12
SQLE-205ENST00000521232 SYNE4Q8N205 404 aa22.04■■□□□ 1.12
SQLE-205ENST00000521232 TSPYL6Q8N831 410 aa22.04■■□□□ 1.12
SQLE-205ENST00000521232 RBM46Q8TBY0 533 aaKnown RBP22.04■■□□□ 1.12
SQLE-205ENST00000521232 TSR2Q969E8 191 aaKnown RBP22.04■■□□□ 1.12
SQLE-205ENST00000521232 PHAXQ9H814 394 aaKnown RBP22.04■■□□□ 1.12
SQLE-205ENST00000521232 SH3TC1Q8TE82 1336 aa22.04■■□□□ 1.12
SQLE-205ENST00000521232 TRIM28Q13263 835 aaKnown RBP22.03■■□□□ 1.12
SQLE-205ENST00000521232 SNED1Q8TER0 1413 aa22.03■■□□□ 1.12
SQLE-205ENST00000521232 HCLS1P14317 486 aaPredicted RBP22.02■■□□□ 1.12
SQLE-205ENST00000521232 VEGFAP15692 232 aaPredicted RBP22.02■■□□□ 1.12
SQLE-205ENST00000521232 GRIPAP1Q4V328 841 aa22.02■■□□□ 1.12
SQLE-205ENST00000521232 PSMD1Q99460 953 aa22.02■■□□□ 1.12
SQLE-205ENST00000521232 ATP5J2-PTCD1G3V325 749 aa22.01■■□□□ 1.11
SQLE-205ENST00000521232 GOLGA2Q08379 1002 aa22.01■■□□□ 1.11
SQLE-205ENST00000521232 RIC3Q7Z5B4 369 aa22.01■■□□□ 1.11
SQLE-205ENST00000521232 WDR63Q8IWG1 891 aa22.01■■□□□ 1.11
SQLE-205ENST00000521232 ZNF277Q9NRM2 450 aaPredicted RBP22.01■■□□□ 1.11
SQLE-205ENST00000521232 POTECB2RU33 542 aa22■■□□□ 1.11
SQLE-205ENST00000521232 PPEF1O14829 653 aaPredicted RBP21.99■■□□□ 1.11
SQLE-205ENST00000521232 IARSP41252 1262 aaKnown RBP21.99■■□□□ 1.11
SQLE-205ENST00000521232 FAM9BQ8IZU0 186 aa21.99■■□□□ 1.11
SQLE-205ENST00000521232 WDR90Q96KV7 1748 aa21.99■■□□□ 1.11
SQLE-205ENST00000521232 LAMB2P55268 1798 aa21.99■■□□□ 1.11
SQLE-205ENST00000521232 BBOX1O75936 387 aa21.98■■□□□ 1.11
SQLE-205ENST00000521232 FSTL1Q12841 308 aa21.98■■□□□ 1.11
SQLE-205ENST00000521232 TWISTNBQ3B726 338 aaPredicted RBP21.98■■□□□ 1.11
SQLE-205ENST00000521232 FAM89AQ96GI7 184 aa21.98■■□□□ 1.11
SQLE-205ENST00000521232 SALL2Q9Y467 1007 aaPredicted RBP21.98■■□□□ 1.11
SQLE-205ENST00000521232 ABCC4O15439 1325 aa21.98■■□□□ 1.11
SQLE-205ENST00000521232 DDNO94850 711 aaPredicted RBP21.97■■□□□ 1.11
SQLE-205ENST00000521232 ZNF428Q96B54 188 aa21.97■■□□□ 1.11
SQLE-205ENST00000521232 ATP6V0A2Q9Y487 856 aa21.97■■□□□ 1.11
SQLE-205ENST00000521232 TCERG1O14776 1098 aaKnown RBP21.96■■□□□ 1.11
SQLE-205ENST00000521232 DDX58O95786 925 aaKnown RBP21.96■■□□□ 1.11
SQLE-205ENST00000521232 DDX46Q7L014 1031 aaKnown RBP21.96■■□□□ 1.11
SQLE-205ENST00000521232 SF3B3Q15393 1217 aaKnown RBP21.95■■□□□ 1.1
SQLE-205ENST00000521232 MYD88Q99836 296 aa21.95■■□□□ 1.1
SQLE-205ENST00000521232 METTL22Q9BUU2 404 aaPredicted RBP21.95■■□□□ 1.1
SQLE-205ENST00000521232 STK31Q9BXU1 1019 aa21.95■■□□□ 1.1
SQLE-205ENST00000521232 TMX4Q9H1E5 349 aaPredicted RBP21.95■■□□□ 1.1
SQLE-205ENST00000521232 DDX60Q8IY21 1712 aaKnown RBP21.94■■□□□ 1.1
SQLE-205ENST00000521232 FZD9O00144 591 aa21.94■■□□□ 1.1
SQLE-205ENST00000521232 GRAPQ13588 217 aa21.94■■□□□ 1.1
SQLE-205ENST00000521232 SLC51AQ86UW1 340 aa21.94■■□□□ 1.1
SQLE-205ENST00000521232 SP8Q8IXZ3 490 aa21.94■■□□□ 1.1
SQLE-205ENST00000521232 ZBTB38Q8NAP3 1195 aaPredicted RBP21.94■■□□□ 1.1
SQLE-205ENST00000521232 CCDC191Q8NCU4 936 aa21.94■■□□□ 1.1
SQLE-205ENST00000521232 SMC1BQ8NDV3 1235 aa21.94■■□□□ 1.1
SQLE-205ENST00000521232 GRAPLQ8TC17 118 aaPredicted RBP21.94■■□□□ 1.1
SQLE-205ENST00000521232 FANCIQ9NVI1 1328 aa21.94■■□□□ 1.1
SQLE-205ENST00000521232 APLP1P51693 650 aa21.93■■□□□ 1.1
SQLE-205ENST00000521232 KSR2Q6VAB6 950 aa21.93■■□□□ 1.1
SQLE-205ENST00000521232 L3MBTL3Q96JM7 780 aaPredicted RBP21.93■■□□□ 1.1
SQLE-205ENST00000521232 TAF1P21675 1872 aa21.92■■□□□ 1.1
SQLE-205ENST00000521232 IRS4O14654 1257 aaPredicted RBP21.92■■□□□ 1.1
SQLE-205ENST00000521232 SLC4A2P04920 1241 aa21.92■■□□□ 1.1
SQLE-205ENST00000521232 JDP2Q8WYK2 163 aa21.92■■□□□ 1.1
SQLE-205ENST00000521232 VPS33BQ9H267 617 aa21.92■■□□□ 1.1
SQLE-205ENST00000521232 MAP3K2Q9Y2U5 619 aa21.92■■□□□ 1.1
SQLE-205ENST00000521232 ZNF541Q9H0D2 1346 aa21.91■■□□□ 1.1
SQLE-205ENST00000521232 CACNA1FO60840 1977 aa21.91■■□□□ 1.1
SQLE-205ENST00000521232 PI4KAP2A4QPH2 592 aa21.91■■□□□ 1.1
SQLE-205ENST00000521232 VAMP4O75379 141 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms