RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 NLRP3Q96P20 1036 aa26.68■■□□□ 1.86
SNHG6-203ENST00000520944 CHPF2Q9P2E5 772 aa26.68■■□□□ 1.86
SNHG6-203ENST00000520944 HOXA10P31260 410 aaPredicted RBP26.67■■□□□ 1.86
SNHG6-203ENST00000520944 DBF4Q9UBU7 674 aaPredicted RBP26.67■■□□□ 1.86
SNHG6-203ENST00000520944 FER1L6Q2WGJ9 1857 aa26.67■■□□□ 1.86
SNHG6-203ENST00000520944 TNRC6CQ9HCJ0 1690 aaKnown RBP26.66■■□□□ 1.86
SNHG6-203ENST00000520944 DUSP27Q5VZP5 1158 aa26.66■■□□□ 1.86
SNHG6-203ENST00000520944 CC2D2BQ6DHV5 1058 aa26.66■■□□□ 1.86
SNHG6-203ENST00000520944 ZNF277Q9NRM2 450 aaPredicted RBP26.66■■□□□ 1.86
SNHG6-203ENST00000520944 MBIPQ9NS73 344 aa26.66■■□□□ 1.86
SNHG6-203ENST00000520944 RIC1Q4ADV7 1423 aa26.65■■□□□ 1.86
SNHG6-203ENST00000520944 GNAI1P63096 354 aa26.65■■□□□ 1.86
SNHG6-203ENST00000520944 TCIRG1Q13488 830 aa26.65■■□□□ 1.86
SNHG6-203ENST00000520944 CCDC88AQ3V6T2 1871 aa26.64■■□□□ 1.86
SNHG6-203ENST00000520944 SLC10A5Q5PT55 438 aa26.64■■□□□ 1.86
SNHG6-203ENST00000520944 SYNE4Q8N205 404 aa26.64■■□□□ 1.86
SNHG6-203ENST00000520944 CRAMP1Q96RY5 1269 aa26.64■■□□□ 1.86
SNHG6-203ENST00000520944 IFT57Q9NWB7 429 aa26.64■■□□□ 1.86
SNHG6-203ENST00000520944 RNF123Q5XPI4 1314 aa26.64■■□□□ 1.85
SNHG6-203ENST00000520944 TIAM2Q8IVF5 1701 aa26.63■■□□□ 1.85
SNHG6-203ENST00000520944 POTECB2RU33 542 aa26.63■■□□□ 1.85
SNHG6-203ENST00000520944 DDNO94850 711 aaPredicted RBP26.63■■□□□ 1.85
SNHG6-203ENST00000520944 ZNF853P0CG23 659 aa26.63■■□□□ 1.85
SNHG6-203ENST00000520944 GRIPAP1Q4V328 841 aa26.63■■□□□ 1.85
SNHG6-203ENST00000520944 NLRP10Q86W26 655 aa26.63■■□□□ 1.85
SNHG6-203ENST00000520944 TMX4Q9H1E5 349 aaPredicted RBP26.63■■□□□ 1.85
SNHG6-203ENST00000520944 HYPKQ9NX55 129 aa26.63■■□□□ 1.85
SNHG6-203ENST00000520944 ARFGEF2Q9Y6D5 1785 aa26.63■■□□□ 1.85
SNHG6-203ENST00000520944 CACNA1SQ13698 1873 aa26.62■■□□□ 1.85
SNHG6-203ENST00000520944 ANKRD13DQ6ZTN6 518 aa26.62■■□□□ 1.85
SNHG6-203ENST00000520944 PSMD1Q99460 953 aa26.62■■□□□ 1.85
SNHG6-203ENST00000520944 TRMT112Q9UI30 125 aaKnown RBP26.62■■□□□ 1.85
SNHG6-203ENST00000520944 IARSP41252 1262 aaKnown RBP26.61■■□□□ 1.85
SNHG6-203ENST00000520944 C3orf67Q6ZVT6 689 aa26.61■■□□□ 1.85
SNHG6-203ENST00000520944 PLBD2Q8NHP8 589 aa26.61■■□□□ 1.85
SNHG6-203ENST00000520944 TCERG1O14776 1098 aaKnown RBP26.6■■□□□ 1.85
SNHG6-203ENST00000520944 PPEF1O14829 653 aaPredicted RBP26.6■■□□□ 1.85
SNHG6-203ENST00000520944 ZNF316A6NFI3 1004 aaPredicted RBP26.59■■□□□ 1.85
SNHG6-203ENST00000520944 IQCA1LA6NCM1 817 aa26.58■■□□□ 1.85
SNHG6-203ENST00000520944 DNAJC5GQ8N7S2 189 aa26.58■■□□□ 1.85
SNHG6-203ENST00000520944 JDP2Q8WYK2 163 aa26.58■■□□□ 1.85
SNHG6-203ENST00000520944 SH3TC1Q8TE82 1336 aa26.58■■□□□ 1.85
SNHG6-203ENST00000520944 DICER1Q9UPY3 1922 aaKnown RBP26.57■■□□□ 1.84
SNHG6-203ENST00000520944 ELL2O00472 640 aaPredicted RBP26.57■■□□□ 1.84
SNHG6-203ENST00000520944 HCLS1P14317 486 aaPredicted RBP26.57■■□□□ 1.84
SNHG6-203ENST00000520944 CCDC184Q52MB2 194 aa26.57■■□□□ 1.84
SNHG6-203ENST00000520944 CHMP4AQ9BY43 222 aa26.57■■□□□ 1.84
SNHG6-203ENST00000520944 ANP32CO43423 234 aa26.56■■□□□ 1.84
SNHG6-203ENST00000520944 WDR90Q96KV7 1748 aa26.56■■□□□ 1.84
SNHG6-203ENST00000520944 L3MBTL3Q96JM7 780 aaPredicted RBP26.55■■□□□ 1.84
SNHG6-203ENST00000520944 FZD9O00144 591 aa26.54■■□□□ 1.84
SNHG6-203ENST00000520944 BBOX1O75936 387 aa26.54■■□□□ 1.84
SNHG6-203ENST00000520944 HTRA3P83110 453 aa26.54■■□□□ 1.84
SNHG6-203ENST00000520944 DDX46Q7L014 1031 aaKnown RBP26.54■■□□□ 1.84
SNHG6-203ENST00000520944 GOLGA2Q08379 1002 aa26.53■■□□□ 1.84
SNHG6-203ENST00000520944 RIC3Q7Z5B4 369 aa26.53■■□□□ 1.84
SNHG6-203ENST00000520944 ZNF428Q96B54 188 aa26.53■■□□□ 1.84
SNHG6-203ENST00000520944 ATP6V0A2Q9Y487 856 aa26.53■■□□□ 1.84
SNHG6-203ENST00000520944 ABCC4O15439 1325 aa26.53■■□□□ 1.84
SNHG6-203ENST00000520944 ZNF541Q9H0D2 1346 aa26.53■■□□□ 1.84
SNHG6-203ENST00000520944 ATP5J2-PTCD1G3V325 749 aa26.52■■□□□ 1.84
SNHG6-203ENST00000520944 CHADLQ6NUI6 762 aa26.52■■□□□ 1.84
SNHG6-203ENST00000520944 LARGE2Q8N3Y3 721 aa26.52■■□□□ 1.84
SNHG6-203ENST00000520944 C8orf58Q8NAV2 365 aa26.52■■□□□ 1.84
SNHG6-203ENST00000520944 ISCA1Q9BUE6 129 aa26.52■■□□□ 1.84
SNHG6-203ENST00000520944 MRS2Q9HD23 443 aa26.52■■□□□ 1.84
SNHG6-203ENST00000520944 EIF6P56537 245 aaKnown RBP26.51■■□□□ 1.83
SNHG6-203ENST00000520944 SNED1Q8TER0 1413 aa26.5■■□□□ 1.83
SNHG6-203ENST00000520944 CCDC30Q5VVM6 783 aa26.5■■□□□ 1.83
SNHG6-203ENST00000520944 GPC2Q8N158 579 aa26.5■■□□□ 1.83
SNHG6-203ENST00000520944 FAM89AQ96GI7 184 aa26.5■■□□□ 1.83
SNHG6-203ENST00000520944 TAF1DQ9H5J8 278 aaPredicted RBP26.5■■□□□ 1.83
SNHG6-203ENST00000520944 HACL1Q9UJ83 578 aa26.5■■□□□ 1.83
SNHG6-203ENST00000520944 CCDC27Q2M243 656 aa26.49■■□□□ 1.83
SNHG6-203ENST00000520944 SUPT20HQ8NEM7 779 aa26.49■■□□□ 1.83
SNHG6-203ENST00000520944 KLRG1Q96E93 195 aa26.49■■□□□ 1.83
SNHG6-203ENST00000520944 PHAXQ9H814 394 aaKnown RBP26.49■■□□□ 1.83
SNHG6-203ENST00000520944 TRIM28Q13263 835 aaKnown RBP26.48■■□□□ 1.83
SNHG6-203ENST00000520944 GRAPQ13588 217 aa26.48■■□□□ 1.83
SNHG6-203ENST00000520944 SP8Q8IXZ3 490 aa26.48■■□□□ 1.83
SNHG6-203ENST00000520944 GRAPLQ8TC17 118 aaPredicted RBP26.48■■□□□ 1.83
SNHG6-203ENST00000520944 VPS33BQ9H267 617 aa26.48■■□□□ 1.83
SNHG6-203ENST00000520944 PPIP5K2O43314 1243 aa26.47■■□□□ 1.83
SNHG6-203ENST00000520944 POTEIP0CG38 1075 aa26.47■■□□□ 1.83
SNHG6-203ENST00000520944 POTEJP0CG39 1038 aa26.47■■□□□ 1.83
SNHG6-203ENST00000520944 DPP8Q6V1X1 898 aaPredicted RBP26.47■■□□□ 1.83
SNHG6-203ENST00000520944 LDHDQ86WU2 507 aa26.47■■□□□ 1.83
SNHG6-203ENST00000520944 WWC1Q8IX03 1113 aa26.47■■□□□ 1.83
SNHG6-203ENST00000520944 GJA3Q9Y6H8 435 aa26.47■■□□□ 1.83
SNHG6-203ENST00000520944 DDX58O95786 925 aaKnown RBP26.46■■□□□ 1.83
SNHG6-203ENST00000520944 EAPPQ56P03 285 aaPredicted RBP26.46■■□□□ 1.83
SNHG6-203ENST00000520944 RTL5Q5HYW3 569 aaPredicted RBP26.46■■□□□ 1.83
SNHG6-203ENST00000520944 SLC51AQ86UW1 340 aa26.46■■□□□ 1.83
SNHG6-203ENST00000520944 NIM1KQ8IY84 436 aa26.46■■□□□ 1.83
SNHG6-203ENST00000520944 EPHX2P34913 555 aa26.45■■□□□ 1.82
SNHG6-203ENST00000520944 TMC4Q7Z404 712 aa26.45■■□□□ 1.82
SNHG6-203ENST00000520944 PNMA8AQ86V59 439 aaPredicted RBP26.45■■□□□ 1.82
SNHG6-203ENST00000520944 MPNDQ8N594 471 aa26.45■■□□□ 1.82
SNHG6-203ENST00000520944 TSR2Q969E8 191 aaKnown RBP26.45■■□□□ 1.82
SNHG6-203ENST00000520944 CLEC11AQ9Y240 323 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms