RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 IQCA1LA6NCM1 817 aa6.83□□□□□ -1.32
SDCBP-207ENST00000520168 RGS20O76081 388 aa6.83□□□□□ -1.32
SDCBP-207ENST00000520168 PHKG2P15735 406 aa6.83□□□□□ -1.32
SDCBP-207ENST00000520168 MAP2K1Q02750 393 aaPredicted RBP6.83□□□□□ -1.32
SDCBP-207ENST00000520168 RASSF7Q02833 373 aa6.83□□□□□ -1.32
SDCBP-207ENST00000520168 TTLL6Q8N841 843 aa6.83□□□□□ -1.32
SDCBP-207ENST00000520168 WBP1LQ9NX94 342 aa6.83□□□□□ -1.32
SDCBP-207ENST00000520168 ANKRD31Q8N7Z5 1873 aa6.83□□□□□ -1.32
SDCBP-207ENST00000520168 TRPM7Q96QT4 1865 aa6.83□□□□□ -1.32
SDCBP-207ENST00000520168 PASKQ96RG2 1323 aa6.82□□□□□ -1.32
SDCBP-207ENST00000520168 TMEM88BA6NKF7 163 aa6.82□□□□□ -1.32
SDCBP-207ENST00000520168 GOLGA8CPA6NN73 597 aa6.82□□□□□ -1.32
SDCBP-207ENST00000520168 POTECB2RU33 542 aa6.82□□□□□ -1.32
SDCBP-207ENST00000520168 POLRMTO00411 1230 aaKnown RBP6.82□□□□□ -1.32
SDCBP-207ENST00000520168 FYB1O15117 783 aa6.82□□□□□ -1.32
SDCBP-207ENST00000520168 FBLN1P23142 703 aa6.82□□□□□ -1.32
SDCBP-207ENST00000520168 CHRNA5P30532 468 aa6.82□□□□□ -1.32
SDCBP-207ENST00000520168 LBX1P52954 281 aa6.82□□□□□ -1.32
SDCBP-207ENST00000520168 THSD4Q6ZMP0 1018 aa6.82□□□□□ -1.32
SDCBP-207ENST00000520168 LDHDQ86WU2 507 aa6.82□□□□□ -1.32
SDCBP-207ENST00000520168 ZBED2Q9BTP6 218 aa6.82□□□□□ -1.32
SDCBP-207ENST00000520168 COL11A2P13942 1736 aaPredicted RBP6.81□□□□□ -1.32
SDCBP-207ENST00000520168 LTBP3Q9NS15 1303 aa6.81□□□□□ -1.32
SDCBP-207ENST00000520168 ZPR1O75312 459 aa6.81□□□□□ -1.32
SDCBP-207ENST00000520168 TM4SF1P30408 202 aa6.81□□□□□ -1.32
SDCBP-207ENST00000520168 VEGFBP49765 207 aa6.81□□□□□ -1.32
SDCBP-207ENST00000520168 DDR1Q08345 913 aa6.81□□□□□ -1.32
SDCBP-207ENST00000520168 ERFEQ4G0M1 354 aa6.81□□□□□ -1.32
SDCBP-207ENST00000520168 MRPL50Q8N5N7 158 aaKnown RBP6.81□□□□□ -1.32
SDCBP-207ENST00000520168 ZDHHC16Q969W1 377 aa6.81□□□□□ -1.32
SDCBP-207ENST00000520168 BEGAINQ9BUH8 593 aa6.81□□□□□ -1.32
SDCBP-207ENST00000520168 PDE4DIPQ5VU43 2346 aa6.81□□□□□ -1.32
SDCBP-207ENST00000520168 SCN7AQ01118 1682 aa6.81□□□□□ -1.32
SDCBP-207ENST00000520168 RASSF10A6NK89 507 aa6.8□□□□□ -1.32
SDCBP-207ENST00000520168 CCDC85CA6NKD9 419 aa6.8□□□□□ -1.32
SDCBP-207ENST00000520168 H0YIN7 160 aa6.8□□□□□ -1.32
SDCBP-207ENST00000520168 NFKBIEO00221 500 aa6.8□□□□□ -1.32
SDCBP-207ENST00000520168 EVI5O60447 810 aa6.8□□□□□ -1.32
SDCBP-207ENST00000520168 HSPA8P11142 646 aaKnown RBP6.8□□□□□ -1.32
SDCBP-207ENST00000520168 CRKLP46109 303 aaKnown RBP6.8□□□□□ -1.32
SDCBP-207ENST00000520168 SOGA3Q5TF21 947 aa6.8□□□□□ -1.32
SDCBP-207ENST00000520168 WNT2BQ93097 391 aa6.8□□□□□ -1.32
SDCBP-207ENST00000520168 SLC4A9Q96Q91 983 aa6.8□□□□□ -1.32
SDCBP-207ENST00000520168 GGNBP2Q9H3C7 697 aa6.8□□□□□ -1.32
SDCBP-207ENST00000520168 WASHC2AQ641Q2 1341 aa6.79□□□□□ -1.32
SDCBP-207ENST00000520168 DEFB115Q30KQ5 88 aa6.79□□□□□ -1.32
SDCBP-207ENST00000520168 NBPF3Q9H094 633 aa6.79□□□□□ -1.32
SDCBP-207ENST00000520168 LTBP1Q14766 1721 aa6.79□□□□□ -1.32
SDCBP-207ENST00000520168 WDR33Q9C0J8 1336 aaKnown RBP6.78□□□□□ -1.32
SDCBP-207ENST00000520168 UBR2Q8IWV8 1755 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 CA12O43570 354 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 ECE1P42892 770 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 CABP4P57796 275 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 AMOTQ4VCS5 1084 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 PNMA8AQ86V59 439 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-207ENST00000520168 C2CD5Q86YS7 1000 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 DDX27Q96GQ7 796 aaKnown RBP6.78□□□□□ -1.32
SDCBP-207ENST00000520168 EYA1Q99502 592 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 ADAM33Q9BZ11 813 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 TAOK3Q9H2K8 898 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 SRP68Q9UHB9 627 aaKnown RBP6.78□□□□□ -1.32
SDCBP-207ENST00000520168 NARFQ9UHQ1 456 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 COL15A1P39059 1388 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 SLX4Q8IY92 1834 aa6.78□□□□□ -1.32
SDCBP-207ENST00000520168 BCORQ6W2J9 1755 aa6.77□□□□□ -1.33
SDCBP-207ENST00000520168 ITGBL1O95965 494 aaPredicted RBP6.77□□□□□ -1.33
SDCBP-207ENST00000520168 PDE6BP35913 854 aa6.77□□□□□ -1.33
SDCBP-207ENST00000520168 MAP3K9P80192 1104 aa6.77□□□□□ -1.33
SDCBP-207ENST00000520168 CDCA8Q53HL2 280 aa6.77□□□□□ -1.33
SDCBP-207ENST00000520168 USPL1Q5W0Q7 1092 aa6.77□□□□□ -1.33
SDCBP-207ENST00000520168 TESK2Q96S53 571 aa6.77□□□□□ -1.33
SDCBP-207ENST00000520168 LARP6Q9BRS8 491 aaKnown RBP6.77□□□□□ -1.33
SDCBP-207ENST00000520168 TAF1DQ9H5J8 278 aaPredicted RBP6.77□□□□□ -1.33
SDCBP-207ENST00000520168 EMILIN1Q9Y6C2 1016 aa6.77□□□□□ -1.33
SDCBP-207ENST00000520168 SOS1Q07889 1333 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-207ENST00000520168 PPM1GO15355 546 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-207ENST00000520168 GTPBP6O43824 516 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-207ENST00000520168 PTCD1O75127 700 aaKnown RBP6.76□□□□□ -1.33
SDCBP-207ENST00000520168 DDNO94850 711 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-207ENST00000520168 SERPINB2P05120 415 aa6.76□□□□□ -1.33
SDCBP-207ENST00000520168 PRKCSHP14314 528 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-207ENST00000520168 MFSD10Q14728 455 aa6.76□□□□□ -1.33
SDCBP-207ENST00000520168 NFIXQ14938 502 aa6.76□□□□□ -1.33
SDCBP-207ENST00000520168 PLEKHO1Q53GL0 409 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-207ENST00000520168 CNKSR1Q969H4 720 aa6.76□□□□□ -1.33
SDCBP-207ENST00000520168 BRIP1Q9BX63 1249 aa6.76□□□□□ -1.33
SDCBP-207ENST00000520168 CASP8AP2Q9UKL3 1982 aa6.76□□□□□ -1.33
SDCBP-207ENST00000520168 MRC1P22897 1456 aa6.75□□□□□ -1.33
SDCBP-207ENST00000520168 CARMIL3Q8ND23 1372 aa6.75□□□□□ -1.33
SDCBP-207ENST00000520168 ST20-MTHFSA0A0A6YYL1 179 aa6.75□□□□□ -1.33
SDCBP-207ENST00000520168 PPP1R3GB7ZBB8 358 aa6.75□□□□□ -1.33
SDCBP-207ENST00000520168 C21orf2O43822 256 aa6.75□□□□□ -1.33
SDCBP-207ENST00000520168 MTHFSP49914 203 aa6.75□□□□□ -1.33
SDCBP-207ENST00000520168 C1orf141Q5JVX7 400 aa6.75□□□□□ -1.33
SDCBP-207ENST00000520168 INTS5Q6P9B9 1019 aaKnown RBP6.75□□□□□ -1.33
SDCBP-207ENST00000520168 HACL1Q9UJ83 578 aa6.75□□□□□ -1.33
SDCBP-207ENST00000520168 ABT1Q9ULW3 272 aaKnown RBP6.75□□□□□ -1.33
SDCBP-207ENST00000520168 AKAP11Q9UKA4 1901 aa6.74□□□□□ -1.33
SDCBP-207ENST00000520168 A0A087WZG4 1122 aa6.74□□□□□ -1.33
SDCBP-207ENST00000520168 EPHX2P34913 555 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms