RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 CCDC191Q8NCU4 936 aa21.36■■□□□ 1.01
TSNARE1-205ENST00000520166 FAM89AQ96GI7 184 aa21.36■■□□□ 1.01
TSNARE1-205ENST00000520166 C4AP0C0L4 1744 aa21.36■■□□□ 1.01
TSNARE1-205ENST00000520166 H7C1W4 665 aa21.35■■□□□ 1.01
TSNARE1-205ENST00000520166 ZPR1O75312 459 aa21.35■■□□□ 1.01
TSNARE1-205ENST00000520166 TRIM28Q13263 835 aaKnown RBP21.35■■□□□ 1.01
TSNARE1-205ENST00000520166 UPF1Q92900 1129 aaKnown RBP eCLIP21.35■■□□□ 1.01
TSNARE1-205ENST00000520166 NIP7Q9Y221 180 aaKnown RBP eCLIP21.35■■□□□ 1.01
TSNARE1-205ENST00000520166 USP42Q9H9J4 1324 aaKnown RBP21.35■■□□□ 1.01
TSNARE1-205ENST00000520166 PNMA6EA0A0J9YXQ4 647 aa21.35■■□□□ 1.01
TSNARE1-205ENST00000520166 RGPD3A6NKT7 1758 aaPredicted RBP21.34■■□□□ 1.01
TSNARE1-205ENST00000520166 RGPD4Q7Z3J3 1758 aa21.34■■□□□ 1.01
TSNARE1-205ENST00000520166 SSFA2P28290 1259 aa21.34■■□□□ 1.01
TSNARE1-205ENST00000520166 AAMPQ13685 434 aa21.34■■□□□ 1.01
TSNARE1-205ENST00000520166 PDGFDQ9GZP0 370 aaPredicted RBP21.34■■□□□ 1.01
TSNARE1-205ENST00000520166 BCORQ6W2J9 1755 aa21.34■■□□□ 1.01
TSNARE1-205ENST00000520166 KDM2BQ8NHM5 1336 aa21.34■■□□□ 1.01
TSNARE1-205ENST00000520166 TUBGCP6Q96RT7 1819 aa21.34■■□□□ 1.01
TSNARE1-205ENST00000520166 ANKRD44Q8N8A2 993 aa21.33■■□□□ 1.01
TSNARE1-205ENST00000520166 BICC1Q9H694 974 aaKnown RBP21.33■■□□□ 1.01
TSNARE1-205ENST00000520166 PNPLA7Q6ZV29 1317 aa21.33■■□□□ 1.01
TSNARE1-205ENST00000520166 HSP90AB3PQ58FF7 597 aa21.32■■□□□ 1
TSNARE1-205ENST00000520166 CHMP4BQ9H444 224 aaKnown RBP21.32■■□□□ 1
TSNARE1-205ENST00000520166 MSH5O43196 834 aa21.32■■□□□ 1
TSNARE1-205ENST00000520166 GYS1P13807 737 aa21.32■■□□□ 1
TSNARE1-205ENST00000520166 SLC15A2Q16348 729 aa21.32■■□□□ 1
TSNARE1-205ENST00000520166 CLEC4GQ6UXB4 293 aa21.32■■□□□ 1
TSNARE1-205ENST00000520166 ANKRD36CQ5JPF3 1778 aa21.31■■□□□ 1
TSNARE1-205ENST00000520166 ADRA2BP18089 450 aa21.31■■□□□ 1
TSNARE1-205ENST00000520166 NUTM1Q86Y26 1132 aa21.31■■□□□ 1
TSNARE1-205ENST00000520166 CCDC24Q8N4L8 307 aa21.31■■□□□ 1
TSNARE1-205ENST00000520166 TRMT112Q9UI30 125 aaKnown RBP21.31■■□□□ 1
TSNARE1-205ENST00000520166 SCN7AQ01118 1682 aa21.31■■□□□ 1
TSNARE1-205ENST00000520166 ATP8B2P98198 1209 aa21.3■■□□□ 1
TSNARE1-205ENST00000520166 PPP1R42Q7Z4L9 355 aa21.3■■□□□ 1
TSNARE1-205ENST00000520166 FOXO4P98177 505 aa21.29■■□□□ 1
TSNARE1-205ENST00000520166 HDAC1Q13547 482 aaPredicted RBP21.29■■□□□ 1
TSNARE1-205ENST00000520166 CCDC125Q86Z20 511 aa21.29■■□□□ 1
TSNARE1-205ENST00000520166 ZBTB38Q8NAP3 1195 aaPredicted RBP21.29■■□□□ 1
TSNARE1-205ENST00000520166 ZNF652Q9Y2D9 606 aa21.29■■□□□ 1
TSNARE1-205ENST00000520166 PCCAP05165 728 aaPredicted RBP21.29■■□□□ 1
TSNARE1-205ENST00000520166 NFIXQ14938 502 aa21.29■■□□□ 1
TSNARE1-205ENST00000520166 RWDD1Q9H446 243 aaPredicted RBP21.29■■□□□ 1
TSNARE1-205ENST00000520166 NTSR2O95665 410 aa21.28■■□□□ 1
TSNARE1-205ENST00000520166 RPAP2Q8IXW5 612 aaPredicted RBP21.28■■□□□ 1
TSNARE1-205ENST00000520166 IBTKQ9P2D0 1353 aaPredicted RBP21.27■■□□□ 1
TSNARE1-205ENST00000520166 HCLS1P14317 486 aaPredicted RBP21.27■■□□□ 1
TSNARE1-205ENST00000520166 CCDC85AQ96PX6 553 aaPredicted RBP21.27■■□□□ 1
TSNARE1-205ENST00000520166 UTP14AQ9BVJ6 771 aaKnown RBP21.27■■□□□ 1
TSNARE1-205ENST00000520166 STK32BQ9NY57 414 aa21.27■■□□□ 1
TSNARE1-205ENST00000520166 MSL1Q68DK7 614 aa21.26■□□□□ 0.99
TSNARE1-205ENST00000520166 SRGAP3O43295 1099 aa21.26■□□□□ 0.99
TSNARE1-205ENST00000520166 ERFEQ4G0M1 354 aa21.26■□□□□ 0.99
TSNARE1-205ENST00000520166 KLHDC4Q8TBB5 520 aa21.26■□□□□ 0.99
TSNARE1-205ENST00000520166 SETDB2Q96T68 719 aa21.26■□□□□ 0.99
TSNARE1-205ENST00000520166 IRS4O14654 1257 aaPredicted RBP21.25■□□□□ 0.99
TSNARE1-205ENST00000520166 LMBR1LQ6UX01 489 aa21.25■□□□□ 0.99
TSNARE1-205ENST00000520166 PARP10Q53GL7 1025 aa21.24■□□□□ 0.99
TSNARE1-205ENST00000520166 C3orf67Q6ZVT6 689 aa21.24■□□□□ 0.99
TSNARE1-205ENST00000520166 CENPQQ7L2Z9 268 aaPredicted RBP21.24■□□□□ 0.99
TSNARE1-205ENST00000520166 PA2G4Q9UQ80 394 aaKnown RBP21.24■□□□□ 0.99
TSNARE1-205ENST00000520166 APBB1O00213 710 aa21.24■□□□□ 0.99
TSNARE1-205ENST00000520166 TM4SF1P30408 202 aa21.24■□□□□ 0.99
TSNARE1-205ENST00000520166 DDR1Q08345 913 aa21.24■□□□□ 0.99
TSNARE1-205ENST00000520166 POLA2Q14181 598 aa21.24■□□□□ 0.99
TSNARE1-205ENST00000520166 SSH3Q8TE77 659 aa21.24■□□□□ 0.99
TSNARE1-205ENST00000520166 RABL6Q3YEC7 729 aaPredicted RBP21.23■□□□□ 0.99
TSNARE1-205ENST00000520166 BCL11AQ9H165 835 aa21.23■□□□□ 0.99
TSNARE1-205ENST00000520166 EXOC6BQ9Y2D4 811 aa21.23■□□□□ 0.99
TSNARE1-205ENST00000520166 SH3TC1Q8TE82 1336 aa21.22■□□□□ 0.99
TSNARE1-205ENST00000520166 MTX1Q13505 466 aa21.22■□□□□ 0.99
TSNARE1-205ENST00000520166 RGL2O15211 777 aa21.21■□□□□ 0.99
TSNARE1-205ENST00000520166 NBPF5PQ86XG9 351 aaPredicted RBP21.21■□□□□ 0.99
TSNARE1-205ENST00000520166 SMC5Q8IY18 1101 aa21.21■□□□□ 0.99
TSNARE1-205ENST00000520166 DCTPP1Q9H773 170 aa21.21■□□□□ 0.99
TSNARE1-205ENST00000520166 CHMP3Q9Y3E7 222 aa21.21■□□□□ 0.99
TSNARE1-205ENST00000520166 CDHR2Q9BYE9 1310 aa21.21■□□□□ 0.99
TSNARE1-205ENST00000520166 RFX5P48382 616 aaPredicted RBP21.21■□□□□ 0.99
TSNARE1-205ENST00000520166 ABCC12Q96J65 1359 aa21.21■□□□□ 0.99
TSNARE1-205ENST00000520166 SMARCA5O60264 1052 aaPredicted RBP21.2■□□□□ 0.98
TSNARE1-205ENST00000520166 TTLL11Q8NHH1 800 aa21.2■□□□□ 0.98
TSNARE1-205ENST00000520166 ZNF594Q96JF6 807 aaPredicted RBP21.2■□□□□ 0.98
TSNARE1-205ENST00000520166 PDZRN3Q9UPQ7 1066 aa21.2■□□□□ 0.98
TSNARE1-205ENST00000520166 HMGB2P26583 209 aaKnown RBP21.19■□□□□ 0.98
TSNARE1-205ENST00000520166 FLAD1Q8NFF5 587 aa21.19■□□□□ 0.98
TSNARE1-205ENST00000520166 PLA2G12BQ9BX93 195 aa21.19■□□□□ 0.98
TSNARE1-205ENST00000520166 POLRMTO00411 1230 aaKnown RBP21.18■□□□□ 0.98
TSNARE1-205ENST00000520166 CSF1RP07333 972 aa21.18■□□□□ 0.98
TSNARE1-205ENST00000520166 FAM161AQ3B820 660 aa21.18■□□□□ 0.98
TSNARE1-205ENST00000520166 GREM2Q9H772 168 aa21.18■□□□□ 0.98
TSNARE1-205ENST00000520166 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.18■□□□□ 0.98
TSNARE1-205ENST00000520166 PDE8AO60658 829 aa21.18■□□□□ 0.98
TSNARE1-205ENST00000520166 SERPINB2P05120 415 aa21.18■□□□□ 0.98
TSNARE1-205ENST00000520166 CTSWP56202 376 aa21.18■□□□□ 0.98
TSNARE1-205ENST00000520166 SIL1Q9H173 461 aa21.18■□□□□ 0.98
TSNARE1-205ENST00000520166 COL24A1Q17RW2 1714 aa21.18■□□□□ 0.98
TSNARE1-205ENST00000520166 DDX60Q8IY21 1712 aaKnown RBP21.17■□□□□ 0.98
TSNARE1-205ENST00000520166 HMMRO75330 724 aa21.17■□□□□ 0.98
TSNARE1-205ENST00000520166 SURF6O75683 361 aaKnown RBP21.17■□□□□ 0.98
TSNARE1-205ENST00000520166 GTF2E1P29083 439 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms