RNA–Protein interactions for RNA: ENST00000519480.5

MCPH1-203, Transcript of microcephalin 1, humanhuman

TSL 1 (best) BASIC

Gene MCPH1, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-203ENST00000519480 GCC1Q96CN9 775 aa12.42□□□□□ -0.42
MCPH1-203ENST00000519480 PRDM10Q9NQV6 1147 aa12.42□□□□□ -0.42
MCPH1-203ENST00000519480 HMMRO75330 724 aa12.42□□□□□ -0.42
MCPH1-203ENST00000519480 SYNE4Q8N205 404 aa12.42□□□□□ -0.42
MCPH1-203ENST00000519480 CCDC87Q9NVE4 849 aa12.42□□□□□ -0.42
MCPH1-203ENST00000519480 DZIP3Q86Y13 1208 aaKnown RBP12.41□□□□□ -0.42
MCPH1-203ENST00000519480 SMARCC1Q92922 1105 aaPredicted RBP12.41□□□□□ -0.42
MCPH1-203ENST00000519480 NUP188Q5SRE5 1749 aa12.41□□□□□ -0.42
MCPH1-203ENST00000519480 TMED8Q6PL24 325 aaPredicted RBP12.41□□□□□ -0.42
MCPH1-203ENST00000519480 SBF2Q86WG5 1849 aa12.41□□□□□ -0.42
MCPH1-203ENST00000519480 SURF6O75683 361 aaKnown RBP12.41□□□□□ -0.42
MCPH1-203ENST00000519480 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
MCPH1-203ENST00000519480 IL1RAPL2Q9NP60 686 aa12.41□□□□□ -0.42
MCPH1-203ENST00000519480 TSHZ3Q63HK5 1081 aa12.4□□□□□ -0.42
MCPH1-203ENST00000519480 ZNF772Q68DY9 489 aaPredicted RBP12.4□□□□□ -0.42
MCPH1-203ENST00000519480 SIL1Q9H173 461 aa12.4□□□□□ -0.42
MCPH1-203ENST00000519480 CCNL1Q9UK58 526 aaPredicted RBP12.4□□□□□ -0.42
MCPH1-203ENST00000519480 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
MCPH1-203ENST00000519480 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
MCPH1-203ENST00000519480 RBM6P78332 1123 aaKnown RBP12.4□□□□□ -0.42
MCPH1-203ENST00000519480 FAM89AQ96GI7 184 aa12.4□□□□□ -0.42
MCPH1-203ENST00000519480 CWC25Q9NXE8 425 aaPredicted RBP12.4□□□□□ -0.42
MCPH1-203ENST00000519480 RGS17Q9UGC6 210 aaPredicted RBP12.4□□□□□ -0.42
MCPH1-203ENST00000519480 AMIGO3Q86WK7 504 aa12.39□□□□□ -0.43
MCPH1-203ENST00000519480 ZBTB47Q9UFB7 747 aaPredicted RBP12.39□□□□□ -0.43
MCPH1-203ENST00000519480 IL6STP40189 918 aaPredicted RBP12.39□□□□□ -0.43
MCPH1-203ENST00000519480 TCIRG1Q13488 830 aa12.39□□□□□ -0.43
MCPH1-203ENST00000519480 POTEAQ6S8J7 498 aa12.39□□□□□ -0.43
MCPH1-203ENST00000519480 RGPD3A6NKT7 1758 aaPredicted RBP12.39□□□□□ -0.43
MCPH1-203ENST00000519480 RGPD4Q7Z3J3 1758 aa12.39□□□□□ -0.43
MCPH1-203ENST00000519480 EIF5P55010 431 aaKnown RBP12.38□□□□□ -0.43
MCPH1-203ENST00000519480 SSH3Q8TE77 659 aa12.38□□□□□ -0.43
MCPH1-203ENST00000519480 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
MCPH1-203ENST00000519480 OS9Q13438 667 aaPredicted RBP12.38□□□□□ -0.43
MCPH1-203ENST00000519480 C8orf34Q49A92 452 aa12.38□□□□□ -0.43
MCPH1-203ENST00000519480 CNPY4Q8N129 248 aa12.38□□□□□ -0.43
MCPH1-203ENST00000519480 PHF14O94880 888 aa12.38□□□□□ -0.43
MCPH1-203ENST00000519480 RXRBP28702 533 aa12.38□□□□□ -0.43
MCPH1-203ENST00000519480 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
MCPH1-203ENST00000519480 BACH2Q9BYV9 841 aa12.38□□□□□ -0.43
MCPH1-203ENST00000519480 POLA2Q14181 598 aa12.37□□□□□ -0.43
MCPH1-203ENST00000519480 LRRC4BQ9NT99 713 aa12.37□□□□□ -0.43
MCPH1-203ENST00000519480 NUP98P52948 1817 aa12.37□□□□□ -0.43
MCPH1-203ENST00000519480 UTYO14607 1347 aa12.37□□□□□ -0.43
MCPH1-203ENST00000519480 GNPATO15228 680 aa12.37□□□□□ -0.43
MCPH1-203ENST00000519480 CASP7P55210 303 aa12.37□□□□□ -0.43
MCPH1-203ENST00000519480 LMBR1LQ6UX01 489 aa12.37□□□□□ -0.43
MCPH1-203ENST00000519480 PPP4R3CPQ6ZMV5 832 aa12.37□□□□□ -0.43
MCPH1-203ENST00000519480 ISCA1Q9BUE6 129 aa12.37□□□□□ -0.43
MCPH1-203ENST00000519480 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.37□□□□□ -0.43
MCPH1-203ENST00000519480 BICDL1Q6ZP65 573 aa12.36□□□□□ -0.43
MCPH1-203ENST00000519480 FAM196AQ6ZSG2 479 aa12.36□□□□□ -0.43
MCPH1-203ENST00000519480 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
MCPH1-203ENST00000519480 FAM161AQ3B820 660 aa12.36□□□□□ -0.43
MCPH1-203ENST00000519480 NUTM1Q86Y26 1132 aa12.36□□□□□ -0.43
MCPH1-203ENST00000519480 CCDC191Q8NCU4 936 aa12.36□□□□□ -0.43
MCPH1-203ENST00000519480 LRRCC1Q9C099 1032 aa12.36□□□□□ -0.43
MCPH1-203ENST00000519480 COL15A1P39059 1388 aa12.36□□□□□ -0.43
MCPH1-203ENST00000519480 H7C1W4 665 aa12.35□□□□□ -0.43
MCPH1-203ENST00000519480 SEC24BO95487 1268 aa12.35□□□□□ -0.43
MCPH1-203ENST00000519480 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
MCPH1-203ENST00000519480 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
MCPH1-203ENST00000519480 UBN2Q6ZU65 1347 aa12.35□□□□□ -0.43
MCPH1-203ENST00000519480 IBTKQ9P2D0 1353 aaPredicted RBP12.35□□□□□ -0.43
MCPH1-203ENST00000519480 COL5A3P25940 1745 aaPredicted RBP12.35□□□□□ -0.43
MCPH1-203ENST00000519480 NLRP10Q86W26 655 aa12.35□□□□□ -0.43
MCPH1-203ENST00000519480 CAMTA2O94983 1202 aa12.34□□□□□ -0.43
MCPH1-203ENST00000519480 PIAS4Q8N2W9 510 aaPredicted RBP12.34□□□□□ -0.43
MCPH1-203ENST00000519480 ZNF592Q92610 1267 aa12.34□□□□□ -0.43
MCPH1-203ENST00000519480 ZNF594Q96JF6 807 aaPredicted RBP12.34□□□□□ -0.43
MCPH1-203ENST00000519480 FOXO4P98177 505 aa12.34□□□□□ -0.43
MCPH1-203ENST00000519480 TRMT112Q9UI30 125 aaKnown RBP12.34□□□□□ -0.43
MCPH1-203ENST00000519480 RHPN1Q8TCX5 695 aa12.34□□□□□ -0.43
MCPH1-203ENST00000519480 MTX1Q13505 466 aa12.33□□□□□ -0.44
MCPH1-203ENST00000519480 NIP7Q9Y221 180 aaKnown RBP eCLIP12.33□□□□□ -0.44
MCPH1-203ENST00000519480 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.33□□□□□ -0.44
MCPH1-203ENST00000519480 GSPT1P15170 499 aaKnown RBP12.33□□□□□ -0.44
MCPH1-203ENST00000519480 CCDC24Q8N4L8 307 aa12.33□□□□□ -0.44
MCPH1-203ENST00000519480 HCLS1P14317 486 aaPredicted RBP12.32□□□□□ -0.44
MCPH1-203ENST00000519480 SUSD4Q5VX71 490 aa12.32□□□□□ -0.44
MCPH1-203ENST00000519480 USPL1Q5W0Q7 1092 aa12.32□□□□□ -0.44
MCPH1-203ENST00000519480 HDAC5Q9UQL6 1122 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 LY75O60449 1722 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 ERVV-1B6SEH8 477 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 SASH1O94885 1247 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 MAP4K4O95819 1239 aaPredicted RBP12.31□□□□□ -0.44
MCPH1-203ENST00000519480 APBA3O96018 575 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 RFX5P48382 616 aaPredicted RBP12.31□□□□□ -0.44
MCPH1-203ENST00000519480 PTPN12Q05209 780 aaKnown RBP12.31□□□□□ -0.44
MCPH1-203ENST00000519480 G3BP1Q13283 466 aaKnown RBP eCLIP12.31□□□□□ -0.44
MCPH1-203ENST00000519480 ZNF34Q8IZ26 560 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 ZBTB38Q8NAP3 1195 aaPredicted RBP12.31□□□□□ -0.44
MCPH1-203ENST00000519480 AK7Q96M32 723 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 RTCBQ9Y3I0 505 aaKnown RBP12.31□□□□□ -0.44
MCPH1-203ENST00000519480 TAF1LQ8IZX4 1826 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 ANKRD36CQ5JPF3 1778 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 CNTNAP4Q9C0A0 1308 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 HSP90AB3PQ58FF7 597 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 TICAM2Q86XR7 235 aa12.31□□□□□ -0.44
MCPH1-203ENST00000519480 PROM2Q8N271 834 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms