RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 TRMT112Q9UI30 125 aaKnown RBP28.79■■■□□ 2.2
SKP1-206ENST00000519321 PTPRCP08575 1304 aa28.78■■■□□ 2.2
SKP1-206ENST00000519321 A0A0G2JLW4 131 aa28.78■■■□□ 2.2
SKP1-206ENST00000519321 NUTM1Q86Y26 1132 aa28.78■■■□□ 2.2
SKP1-206ENST00000519321 N4BP2Q86UW6 1770 aaPredicted RBP28.78■■■□□ 2.2
SKP1-206ENST00000519321 RIC1Q4ADV7 1423 aa28.77■■■□□ 2.2
SKP1-206ENST00000519321 ANKRD31Q8N7Z5 1873 aa28.77■■■□□ 2.2
SKP1-206ENST00000519321 BRPF1P55201 1214 aaPredicted RBP28.77■■■□□ 2.2
SKP1-206ENST00000519321 ERFEQ4G0M1 354 aa28.77■■■□□ 2.2
SKP1-206ENST00000519321 C2CD5Q86YS7 1000 aa28.77■■■□□ 2.2
SKP1-206ENST00000519321 SH3TC1Q8TE82 1336 aa28.76■■■□□ 2.19
SKP1-206ENST00000519321 RARSP54136 660 aaKnown RBP28.76■■■□□ 2.19
SKP1-206ENST00000519321 CWC25Q9NXE8 425 aaPredicted RBP28.76■■■□□ 2.19
SKP1-206ENST00000519321 PIM2Q9P1W9 311 aa28.76■■■□□ 2.19
SKP1-206ENST00000519321 CHRNA5P30532 468 aa28.75■■■□□ 2.19
SKP1-206ENST00000519321 SLC10A5Q5PT55 438 aa28.75■■■□□ 2.19
SKP1-206ENST00000519321 BCL2L13Q9BXK5 485 aa28.75■■■□□ 2.19
SKP1-206ENST00000519321 KLRG2A4D1S0 409 aaPredicted RBP28.74■■■□□ 2.19
SKP1-206ENST00000519321 KCNA3P22001 575 aa28.74■■■□□ 2.19
SKP1-206ENST00000519321 GPR162Q16538 588 aa28.74■■■□□ 2.19
SKP1-206ENST00000519321 HSP90B1P14625 803 aaKnown RBP28.73■■■□□ 2.19
SKP1-206ENST00000519321 LINS1Q8NG48 757 aa28.73■■■□□ 2.19
SKP1-206ENST00000519321 ABCC12Q96J65 1359 aa28.73■■■□□ 2.19
SKP1-206ENST00000519321 IGKV5-2P06315 115 aa28.72■■■□□ 2.19
SKP1-206ENST00000519321 PELP1Q8IZL8 1130 aaKnown RBP28.72■■■□□ 2.19
SKP1-206ENST00000519321 ZBTB38Q8NAP3 1195 aaPredicted RBP28.72■■■□□ 2.19
SKP1-206ENST00000519321 DLEC1Q9Y238 1755 aa28.72■■■□□ 2.19
SKP1-206ENST00000519321 NEURL1BA8MQ27 555 aa28.71■■■□□ 2.19
SKP1-206ENST00000519321 F6X3S4 739 aa28.71■■■□□ 2.19
SKP1-206ENST00000519321 MASTLQ96GX5 879 aa28.71■■■□□ 2.19
SKP1-206ENST00000519321 NLRP3Q96P20 1036 aa28.71■■■□□ 2.19
SKP1-206ENST00000519321 KIF16BQ96L93 1317 aa28.7■■■□□ 2.19
SKP1-206ENST00000519321 PCCAP05165 728 aaPredicted RBP28.7■■■□□ 2.18
SKP1-206ENST00000519321 SRGNP10124 158 aa28.7■■■□□ 2.18
SKP1-206ENST00000519321 DALRD3Q5D0E6 543 aaKnown RBP28.7■■■□□ 2.18
SKP1-206ENST00000519321 STYK1Q6J9G0 422 aa28.7■■■□□ 2.18
SKP1-206ENST00000519321 BRCA1P38398 1863 aaKnown RBP28.7■■■□□ 2.18
SKP1-206ENST00000519321 GRIN3BO60391 1043 aa28.69■■■□□ 2.18
SKP1-206ENST00000519321 NPR1P16066 1061 aa28.69■■■□□ 2.18
SKP1-206ENST00000519321 ZNF622Q969S3 477 aaKnown RBP eCLIP28.69■■■□□ 2.18
SKP1-206ENST00000519321 FAM89AQ96GI7 184 aa28.69■■■□□ 2.18
SKP1-206ENST00000519321 CWF19L2Q2TBE0 894 aaKnown RBP28.68■■■□□ 2.18
SKP1-206ENST00000519321 TTLL6Q8N841 843 aa28.68■■■□□ 2.18
SKP1-206ENST00000519321 CNKSR1Q969H4 720 aa28.68■■■□□ 2.18
SKP1-206ENST00000519321 BCS1LQ9Y276 419 aa28.68■■■□□ 2.18
SKP1-206ENST00000519321 CRY2Q49AN0 593 aa28.67■■■□□ 2.18
SKP1-206ENST00000519321 BEND3Q5T5X7 828 aa28.67■■■□□ 2.18
SKP1-206ENST00000519321 YTHDC1Q96MU7 727 aaKnown RBP28.67■■■□□ 2.18
SKP1-206ENST00000519321 COL11A2P13942 1736 aaPredicted RBP28.66■■■□□ 2.18
SKP1-206ENST00000519321 SLC4A10Q6U841 1118 aa28.66■■■□□ 2.18
SKP1-206ENST00000519321 ARHGAP45Q92619 1136 aa28.66■■■□□ 2.18
SKP1-206ENST00000519321 API5Q9BZZ5 524 aaKnown RBP28.66■■■□□ 2.18
SKP1-206ENST00000519321 NOB1Q9ULX3 412 aaKnown RBP28.66■■■□□ 2.18
SKP1-206ENST00000519321 TNRC6CQ9HCJ0 1690 aaKnown RBP28.66■■■□□ 2.18
SKP1-206ENST00000519321 IRS4O14654 1257 aaPredicted RBP28.65■■■□□ 2.18
SKP1-206ENST00000519321 IPO8O15397 1037 aaKnown RBP28.65■■■□□ 2.18
SKP1-206ENST00000519321 ALDH1L1O75891 902 aa28.65■■■□□ 2.18
SKP1-206ENST00000519321 HCLS1P14317 486 aaPredicted RBP28.65■■■□□ 2.18
SKP1-206ENST00000519321 ALDH1B1P30837 517 aa28.65■■■□□ 2.18
SKP1-206ENST00000519321 GCKRQ14397 625 aa28.65■■■□□ 2.18
SKP1-206ENST00000519321 SYNE4Q8N205 404 aa28.65■■■□□ 2.18
SKP1-206ENST00000519321 RPGRQ92834 1020 aaKnown RBP28.65■■■□□ 2.18
SKP1-206ENST00000519321 SRCIN1Q9C0H9 1055 aa28.65■■■□□ 2.18
SKP1-206ENST00000519321 WWC3Q9ULE0 1092 aa28.65■■■□□ 2.18
SKP1-206ENST00000519321 YBX3P16989 372 aaKnown RBP eCLIP28.64■■■□□ 2.181e-12■■□□□ 13.5
SKP1-206ENST00000519321 CDHR2Q9BYE9 1310 aa28.64■■■□□ 2.17
SKP1-206ENST00000519321 RTL5Q5HYW3 569 aaPredicted RBP28.63■■■□□ 2.17
SKP1-206ENST00000519321 HOXA10P31260 410 aaPredicted RBP28.62■■■□□ 2.17
SKP1-206ENST00000519321 RBM17Q96I25 401 aaKnown RBP28.62■■■□□ 2.17
SKP1-206ENST00000519321 LAMB2P55268 1798 aa28.62■■■□□ 2.17
SKP1-206ENST00000519321 DDX60Q8IY21 1712 aaKnown RBP28.61■■■□□ 2.17
SKP1-206ENST00000519321 H7C1W4 665 aa28.61■■■□□ 2.17
SKP1-206ENST00000519321 BCAR3O75815 825 aa28.61■■■□□ 2.17
SKP1-206ENST00000519321 ARFGEF1Q9Y6D6 1849 aa28.61■■■□□ 2.17
SKP1-206ENST00000519321 CRAMP1Q96RY5 1269 aa28.6■■■□□ 2.17
SKP1-206ENST00000519321 PDE8AO60658 829 aa28.59■■■□□ 2.17
SKP1-206ENST00000519321 SF3B3Q15393 1217 aaKnown RBP28.59■■■□□ 2.17
SKP1-206ENST00000519321 UBE3BQ7Z3V4 1068 aa28.59■■■□□ 2.17
SKP1-206ENST00000519321 C3orf67Q6ZVT6 689 aa28.58■■■□□ 2.17
SKP1-206ENST00000519321 C9orf78Q9NZ63 289 aaPredicted RBP28.58■■■□□ 2.17
SKP1-206ENST00000519321 CCT4P50991 539 aaKnown RBP28.57■■■□□ 2.16
SKP1-206ENST00000519321 PRPF40BQ6NWY9 871 aaKnown RBP28.57■■■□□ 2.16
SKP1-206ENST00000519321 DDX46Q7L014 1031 aaKnown RBP28.57■■■□□ 2.16
SKP1-206ENST00000519321 FRAT1Q92837 279 aaPredicted RBP28.57■■■□□ 2.16
SKP1-206ENST00000519321 GRM8O00222 908 aa28.56■■■□□ 2.16
SKP1-206ENST00000519321 SOGA3Q5TF21 947 aa28.56■■■□□ 2.16
SKP1-206ENST00000519321 ATF7IPQ6VMQ6 1270 aa28.56■■■□□ 2.16
SKP1-206ENST00000519321 JARID2Q92833 1246 aaPredicted RBP28.56■■■□□ 2.16
SKP1-206ENST00000519321 ZKSCAN2Q63HK3 967 aa28.55■■■□□ 2.16
SKP1-206ENST00000519321 PLA2G12BQ9BX93 195 aa28.55■■■□□ 2.16
SKP1-206ENST00000519321 CCDC152Q4G0S7 254 aa28.54■■■□□ 2.16
SKP1-206ENST00000519321 CASP7P55210 303 aa28.53■■■□□ 2.16
SKP1-206ENST00000519321 RCAN3Q9UKA8 241 aa28.53■■■□□ 2.16
SKP1-206ENST00000519321 CACNA1SQ13698 1873 aa28.53■■■□□ 2.16
SKP1-206ENST00000519321 SLX4Q8IY92 1834 aa28.52■■■□□ 2.16
SKP1-206ENST00000519321 ABCC4O15439 1325 aa28.51■■■□□ 2.15
SKP1-206ENST00000519321 C21orf2O43822 256 aa28.51■■■□□ 2.15
SKP1-206ENST00000519321 BBOX1O75936 387 aa28.51■■■□□ 2.15
SKP1-206ENST00000519321 TRIM27P14373 513 aa28.51■■■□□ 2.15
SKP1-206ENST00000519321 CTSWP56202 376 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms