RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 PARNO95453 639 aaKnown RBP6.62□□□□□ -1.35
AP3B1-204ENST00000519295 TRPC1P48995 793 aa6.62□□□□□ -1.35
AP3B1-204ENST00000519295 MKRN3Q13064 507 aaKnown RBP6.62□□□□□ -1.35
AP3B1-204ENST00000519295 MUC3BQ9H195 1237 aa6.62□□□□□ -1.35
AP3B1-204ENST00000519295 RETREG1Q9H6L5 497 aa6.62□□□□□ -1.35
AP3B1-204ENST00000519295 GCP02774 474 aa6.61□□□□□ -1.35
AP3B1-204ENST00000519295 NBR1Q14596 966 aa6.61□□□□□ -1.35
AP3B1-204ENST00000519295 CCDC94Q9BW85 323 aaPredicted RBP6.61□□□□□ -1.35
AP3B1-204ENST00000519295 BTG4Q9NY30 223 aa6.61□□□□□ -1.35
AP3B1-204ENST00000519295 EVC2Q86UK5 1308 aa6.61□□□□□ -1.35
AP3B1-204ENST00000519295 HOXD10P28358 340 aa6.61□□□□□ -1.35
AP3B1-204ENST00000519295 SEZ6LQ9BYH1 1024 aa6.61□□□□□ -1.35
AP3B1-204ENST00000519295 CWC25Q9NXE8 425 aaPredicted RBP6.61□□□□□ -1.35
AP3B1-204ENST00000519295 TRIM52Q96A61 297 aa6.61□□□□□ -1.35
AP3B1-204ENST00000519295 HOXC10Q9NYD6 342 aa6.61□□□□□ -1.35
AP3B1-204ENST00000519295 COL4A1P02462 1669 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 RAB11FIP3O75154 756 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 MAP9Q49MG5 647 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 TMEM132EQ6IEE7 984 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 CCDC172P0C7W6 258 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 RASA3Q14644 834 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 MTHFD1LQ6UB35 978 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 MIGA1Q8NAN2 632 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 RBM27Q9P2N5 1060 aaKnown RBP6.6□□□□□ -1.35
AP3B1-204ENST00000519295 LRRC10BA6NIK2 292 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 AMOTQ4VCS5 1084 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 ATG3Q9NT62 314 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 ZBED9Q6R2W3 1325 aa6.6□□□□□ -1.35
AP3B1-204ENST00000519295 PAX3P23760 479 aa6.59□□□□□ -1.35
AP3B1-204ENST00000519295 ZKSCAN2Q63HK3 967 aa6.59□□□□□ -1.35
AP3B1-204ENST00000519295 GOLIM4O00461 696 aa6.59□□□□□ -1.35
AP3B1-204ENST00000519295 MARCH10Q8NA82 808 aaPredicted RBP6.59□□□□□ -1.35
AP3B1-204ENST00000519295 IPO9Q96P70 1041 aaKnown RBP6.59□□□□□ -1.35
AP3B1-204ENST00000519295 ECM29Q5VYK3 1845 aa6.59□□□□□ -1.35
AP3B1-204ENST00000519295 TIMM44O43615 452 aa6.59□□□□□ -1.35
AP3B1-204ENST00000519295 TPM2P07951 284 aa6.59□□□□□ -1.35
AP3B1-204ENST00000519295 RC3H1Q5TC82 1133 aaKnown RBP6.59□□□□□ -1.35
AP3B1-204ENST00000519295 JMYQ8N9B5 988 aa6.59□□□□□ -1.35
AP3B1-204ENST00000519295 ANP32BQ92688 251 aaKnown RBP6.59□□□□□ -1.35
AP3B1-204ENST00000519295 NUTM2DQ5VT03 806 aaPredicted RBP6.59□□□□□ -1.36
AP3B1-204ENST00000519295 CALR3Q96L12 384 aaKnown RBP6.59□□□□□ -1.36
AP3B1-204ENST00000519295 FAM210AQ96ND0 272 aa6.59□□□□□ -1.36
AP3B1-204ENST00000519295 SENP7Q9BQF6 1050 aa6.59□□□□□ -1.36
AP3B1-204ENST00000519295 APBB1O00213 710 aa6.58□□□□□ -1.36
AP3B1-204ENST00000519295 TBC1D25Q3MII6 688 aa6.58□□□□□ -1.36
AP3B1-204ENST00000519295 IP6K1Q92551 441 aa6.58□□□□□ -1.36
AP3B1-204ENST00000519295 RGS20O76081 388 aa6.58□□□□□ -1.36
AP3B1-204ENST00000519295 BANK1Q8NDB2 785 aa6.58□□□□□ -1.36
AP3B1-204ENST00000519295 MICAL1Q8TDZ2 1067 aa6.58□□□□□ -1.36
AP3B1-204ENST00000519295 GNL3LQ9NVN8 582 aaKnown RBP6.58□□□□□ -1.36
AP3B1-204ENST00000519295 TRPM7Q96QT4 1865 aa6.58□□□□□ -1.36
AP3B1-204ENST00000519295 HDAC1Q13547 482 aaPredicted RBP6.58□□□□□ -1.36
AP3B1-204ENST00000519295 PLPP6Q8IY26 295 aa6.58□□□□□ -1.36
AP3B1-204ENST00000519295 MTFR1LQ9H019 292 aa6.58□□□□□ -1.36
AP3B1-204ENST00000519295 TSPYL2Q9H2G4 693 aaPredicted RBP6.58□□□□□ -1.36
AP3B1-204ENST00000519295 LARGE2Q8N3Y3 721 aa6.57□□□□□ -1.36
AP3B1-204ENST00000519295 NCAPGQ9BPX3 1015 aa6.57□□□□□ -1.36
AP3B1-204ENST00000519295 TEX13AQ9BXU3 409 aaPredicted RBP6.57□□□□□ -1.36
AP3B1-204ENST00000519295 EFCC1Q9HA90 598 aa6.57□□□□□ -1.36
AP3B1-204ENST00000519295 MED4Q9NPJ6 270 aa6.57□□□□□ -1.36
AP3B1-204ENST00000519295 CCDC194A0A1B0GVG4 234 aa6.57□□□□□ -1.36
AP3B1-204ENST00000519295 NAT2P11245 290 aa6.57□□□□□ -1.36
AP3B1-204ENST00000519295 HIRIP3Q9BW71 556 aaPredicted RBP6.57□□□□□ -1.36
AP3B1-204ENST00000519295 ATP10DQ9P241 1426 aa6.57□□□□□ -1.36
AP3B1-204ENST00000519295 EZH2Q15910 746 aaKnown RBP6.57□□□□□ -1.36
AP3B1-204ENST00000519295 GZF1Q9H116 711 aaPredicted RBP6.57□□□□□ -1.36
AP3B1-204ENST00000519295 AXIN2Q9Y2T1 843 aa6.57□□□□□ -1.36
AP3B1-204ENST00000519295 KTN1Q86UP2 1357 aaKnown RBP6.56□□□□□ -1.36
AP3B1-204ENST00000519295 TAF3Q5VWG9 929 aa6.56□□□□□ -1.36
AP3B1-204ENST00000519295 IFNLR1Q8IU57 520 aaPredicted RBP6.56□□□□□ -1.36
AP3B1-204ENST00000519295 ZNF710Q8N1W2 664 aa6.56□□□□□ -1.36
AP3B1-204ENST00000519295 CCDC88AQ3V6T2 1871 aa6.56□□□□□ -1.36
AP3B1-204ENST00000519295 LARP1Q6PKG0 1096 aaKnown RBP6.56□□□□□ -1.36
AP3B1-204ENST00000519295 FAM53CQ9NYF3 392 aa6.56□□□□□ -1.36
AP3B1-204ENST00000519295 RBM46Q8TBY0 533 aaKnown RBP6.56□□□□□ -1.36
AP3B1-204ENST00000519295 NEK9Q8TD19 979 aa6.56□□□□□ -1.36
AP3B1-204ENST00000519295 PNPLA7Q6ZV29 1317 aa6.56□□□□□ -1.36
AP3B1-204ENST00000519295 MYH16Q9H6N6 1097 aa6.55□□□□□ -1.36
AP3B1-204ENST00000519295 FLT4P35916 1363 aa6.55□□□□□ -1.36
AP3B1-204ENST00000519295 NUTM2BA6NNL0 878 aaPredicted RBP6.55□□□□□ -1.36
AP3B1-204ENST00000519295 NUTM2EB1AL46 878 aaPredicted RBP6.55□□□□□ -1.36
AP3B1-204ENST00000519295 ADAMTS2O95450 1211 aa6.55□□□□□ -1.36
AP3B1-204ENST00000519295 SLC15A2Q16348 729 aa6.55□□□□□ -1.36
AP3B1-204ENST00000519295 TMCO4Q5TGY1 634 aa6.55□□□□□ -1.36
AP3B1-204ENST00000519295 C11orf96Q7Z7L8 435 aa6.55□□□□□ -1.36
AP3B1-204ENST00000519295 NUTM2AQ8IVF1 878 aaPredicted RBP6.55□□□□□ -1.36
AP3B1-204ENST00000519295 TNPO1Q92973 898 aaKnown RBP6.55□□□□□ -1.36
AP3B1-204ENST00000519295 DUSP9Q99956 384 aaKnown RBP6.55□□□□□ -1.36
AP3B1-204ENST00000519295 JADE2Q9NQC1 790 aa6.55□□□□□ -1.36
AP3B1-204ENST00000519295 IL16Q14005 1332 aa6.55□□□□□ -1.36
AP3B1-204ENST00000519295 AGBL1Q96MI9 1066 aa6.55□□□□□ -1.36
AP3B1-204ENST00000519295 GINM1Q9NU53 330 aa6.55□□□□□ -1.36
AP3B1-204ENST00000519295 CTAG1AP78358 180 aa6.54□□□□□ -1.36
AP3B1-204ENST00000519295 ELOA2Q8IYF1 753 aaPredicted RBP6.54□□□□□ -1.36
AP3B1-204ENST00000519295 ANKRD13AQ8IZ07 590 aa6.54□□□□□ -1.36
AP3B1-204ENST00000519295 IBTKQ9P2D0 1353 aaPredicted RBP6.54□□□□□ -1.36
AP3B1-204ENST00000519295 PNMA2Q9UL42 364 aa6.54□□□□□ -1.36
AP3B1-204ENST00000519295 U2SURPO15042 1029 aaKnown RBP6.54□□□□□ -1.36
AP3B1-204ENST00000519295 DUSP27Q5VZP5 1158 aa6.54□□□□□ -1.36
AP3B1-204ENST00000519295 CXorf38Q8TB03 319 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms