RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 DZIP3Q86Y13 1208 aaKnown RBP13.36□□□□□ -0.27
SH2D4A-202ENST00000518040 ZNF496Q96IT1 587 aaPredicted RBP13.36□□□□□ -0.27
SH2D4A-202ENST00000518040 POLR3GLQ9BT43 218 aa13.36□□□□□ -0.27
SH2D4A-202ENST00000518040 TEFQ10587 303 aa13.35□□□□□ -0.27
SH2D4A-202ENST00000518040 MTHFSDQ2M296 383 aaKnown RBP13.35□□□□□ -0.27
SH2D4A-202ENST00000518040 CST9Q5W186 159 aa13.35□□□□□ -0.27
SH2D4A-202ENST00000518040 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
SH2D4A-202ENST00000518040 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
SH2D4A-202ENST00000518040 LTBP1Q14766 1721 aa13.35□□□□□ -0.27
SH2D4A-202ENST00000518040 PANK3Q9H999 370 aa13.34□□□□□ -0.27
SH2D4A-202ENST00000518040 TSKSQ9UJT2 592 aa13.34□□□□□ -0.27
SH2D4A-202ENST00000518040 BCORQ6W2J9 1755 aa13.34□□□□□ -0.27
SH2D4A-202ENST00000518040 PDE4DIPQ5VU43 2346 aa13.34□□□□□ -0.27
SH2D4A-202ENST00000518040 AOC2O75106 756 aa13.34□□□□□ -0.27
SH2D4A-202ENST00000518040 SAPCD2Q86UD0 394 aa13.34□□□□□ -0.27
SH2D4A-202ENST00000518040 SCNN1DP51172 638 aa13.33□□□□□ -0.28
SH2D4A-202ENST00000518040 PRPF38BQ5VTL8 546 aaKnown RBP13.33□□□□□ -0.28
SH2D4A-202ENST00000518040 A1BGP04217 495 aa13.32□□□□□ -0.28
SH2D4A-202ENST00000518040 HMOX1P09601 288 aa13.31□□□□□ -0.28
SH2D4A-202ENST00000518040 EPS15P42566 896 aa13.31□□□□□ -0.28
SH2D4A-202ENST00000518040 NOGQ13253 232 aa13.31□□□□□ -0.28
SH2D4A-202ENST00000518040 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
SH2D4A-202ENST00000518040 ADARB2Q9NS39 739 aaKnown RBP13.31□□□□□ -0.28
SH2D4A-202ENST00000518040 CASP8AP2Q9UKL3 1982 aa13.31□□□□□ -0.28
SH2D4A-202ENST00000518040 TRAF5O00463 557 aa13.31□□□□□ -0.28
SH2D4A-202ENST00000518040 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.28
SH2D4A-202ENST00000518040 OLFM4Q6UX06 510 aa13.31□□□□□ -0.28
SH2D4A-202ENST00000518040 TNRC18O15417 2968 aaPredicted RBP13.3□□□□□ -0.28
SH2D4A-202ENST00000518040 GNAT3A8MTJ3 354 aa13.3□□□□□ -0.28
SH2D4A-202ENST00000518040 CELF2O95319 508 aaKnown RBP13.3□□□□□ -0.28
SH2D4A-202ENST00000518040 GTF2E1P29083 439 aaPredicted RBP13.3□□□□□ -0.28
SH2D4A-202ENST00000518040 LARGE2Q8N3Y3 721 aa13.3□□□□□ -0.28
SH2D4A-202ENST00000518040 GAS2L2Q8NHY3 880 aa13.3□□□□□ -0.28
SH2D4A-202ENST00000518040 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
SH2D4A-202ENST00000518040 KNSTRNQ9Y448 316 aa13.3□□□□□ -0.28
SH2D4A-202ENST00000518040 SNED1Q8TER0 1413 aa13.29□□□□□ -0.28
SH2D4A-202ENST00000518040 VPS33BQ9H267 617 aa13.29□□□□□ -0.28
SH2D4A-202ENST00000518040 HAX1O00165 279 aa13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 CIAPIN1Q6FI81 312 aa13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 NIM1KQ8IY84 436 aa13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 ZC3H15Q8WU90 426 aaKnown RBP13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 NYXQ9GZU5 481 aa13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 SAGE1Q9NXZ1 904 aa13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 TIMELESSQ9UNS1 1208 aa13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 DIAPH1O60610 1272 aaKnown RBP13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 CRY2Q49AN0 593 aa13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 IL17REQ8NFR9 667 aa13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 GPRC5DQ9NZD1 345 aa13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 PGAP2Q9UHJ9 254 aa13.28□□□□□ -0.28
SH2D4A-202ENST00000518040 CDHR2Q9BYE9 1310 aa13.27□□□□□ -0.28
SH2D4A-202ENST00000518040 TMX4Q9H1E5 349 aaPredicted RBP13.27□□□□□ -0.29
SH2D4A-202ENST00000518040 SIPA1L3O60292 1781 aaPredicted RBP13.26□□□□□ -0.29
SH2D4A-202ENST00000518040 BTBD11A6QL63 1104 aa13.26□□□□□ -0.29
SH2D4A-202ENST00000518040 CDC37L1Q7L3B6 337 aa13.26□□□□□ -0.29
SH2D4A-202ENST00000518040 RPGRQ92834 1020 aaKnown RBP13.26□□□□□ -0.29
SH2D4A-202ENST00000518040 SNRPA1P09661 255 aaKnown RBP13.25□□□□□ -0.29
SH2D4A-202ENST00000518040 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
SH2D4A-202ENST00000518040 HOXA10P31260 410 aaPredicted RBP13.25□□□□□ -0.29
SH2D4A-202ENST00000518040 GCC1Q96CN9 775 aa13.25□□□□□ -0.29
SH2D4A-202ENST00000518040 USP16Q9Y5T5 823 aa13.25□□□□□ -0.29
SH2D4A-202ENST00000518040 KIF7Q2M1P5 1343 aa13.25□□□□□ -0.29
SH2D4A-202ENST00000518040 CEMIPQ8WUJ3 1361 aa13.25□□□□□ -0.29
SH2D4A-202ENST00000518040 COL4A5P29400 1685 aa13.25□□□□□ -0.29
SH2D4A-202ENST00000518040 SOX10P56693 466 aa13.24□□□□□ -0.29
SH2D4A-202ENST00000518040 GLIS2Q9BZE0 524 aaPredicted RBP13.24□□□□□ -0.29
SH2D4A-202ENST00000518040 RIC1Q4ADV7 1423 aa13.24□□□□□ -0.29
SH2D4A-202ENST00000518040 FAM177BA6PVY3 158 aa13.24□□□□□ -0.29
SH2D4A-202ENST00000518040 PPIP5K2O43314 1243 aa13.24□□□□□ -0.29
SH2D4A-202ENST00000518040 SUPT20HQ8NEM7 779 aa13.24□□□□□ -0.29
SH2D4A-202ENST00000518040 RBM17Q96I25 401 aaKnown RBP13.24□□□□□ -0.29
SH2D4A-202ENST00000518040 CRAMP1Q96RY5 1269 aa13.24□□□□□ -0.29
SH2D4A-202ENST00000518040 HUNKP57058 714 aa13.23□□□□□ -0.29
SH2D4A-202ENST00000518040 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
SH2D4A-202ENST00000518040 ZNF408Q9H9D4 720 aa13.23□□□□□ -0.29
SH2D4A-202ENST00000518040 ZNRF3Q9ULT6 936 aa13.23□□□□□ -0.29
SH2D4A-202ENST00000518040 NPC1L1Q9UHC9 1359 aa13.23□□□□□ -0.29
SH2D4A-202ENST00000518040 PPEF1O14829 653 aaPredicted RBP13.22□□□□□ -0.29
SH2D4A-202ENST00000518040 EIF4G2P78344 907 aaKnown RBP eCLIP13.22□□□□□ -0.29
SH2D4A-202ENST00000518040 NBPF15Q8N660 670 aa13.22□□□□□ -0.29
SH2D4A-202ENST00000518040 PIP4K2AP48426 406 aaPredicted RBP13.21□□□□□ -0.29
SH2D4A-202ENST00000518040 CXCL9Q07325 125 aa13.21□□□□□ -0.29
SH2D4A-202ENST00000518040 TNIP1Q15025 636 aa13.21□□□□□ -0.29
SH2D4A-202ENST00000518040 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.29
SH2D4A-202ENST00000518040 ERVV-1B6SEH8 477 aa13.21□□□□□ -0.3
SH2D4A-202ENST00000518040 GMPSP49915 693 aaPredicted RBP13.21□□□□□ -0.3
SH2D4A-202ENST00000518040 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.3
SH2D4A-202ENST00000518040 RGMBQ6NW40 437 aa13.21□□□□□ -0.3
SH2D4A-202ENST00000518040 CTU1Q7Z7A3 348 aaKnown RBP13.21□□□□□ -0.3
SH2D4A-202ENST00000518040 BCL2L13Q9BXK5 485 aa13.21□□□□□ -0.3
SH2D4A-202ENST00000518040 KCNQ3O43525 872 aa13.2□□□□□ -0.3
SH2D4A-202ENST00000518040 PKN2Q16513 984 aaKnown RBP13.2□□□□□ -0.3
SH2D4A-202ENST00000518040 ABCC12Q96J65 1359 aa13.19□□□□□ -0.3
SH2D4A-202ENST00000518040 H7C1D1 291 aa13.19□□□□□ -0.3
SH2D4A-202ENST00000518040 HLFQ16534 295 aa13.19□□□□□ -0.3
SH2D4A-202ENST00000518040 AOC3Q16853 763 aa13.19□□□□□ -0.3
SH2D4A-202ENST00000518040 C2orf69Q8N8R5 385 aa13.19□□□□□ -0.3
SH2D4A-202ENST00000518040 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
SH2D4A-202ENST00000518040 NBPF10Q6P3W6 841 aaKnown RBP13.18□□□□□ -0.3
SH2D4A-202ENST00000518040 NUTM1Q86Y26 1132 aa13.18□□□□□ -0.3
SH2D4A-202ENST00000518040 ZIC5Q96T25 663 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms