RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 ZPR1O75312 459 aa14.48□□□□□ -0.09
ARFGEF1-202ENST00000517955 NEXNQ0ZGT2 675 aa14.48□□□□□ -0.09
ARFGEF1-202ENST00000517955 TNNQ9UQP3 1299 aa14.48□□□□□ -0.09
ARFGEF1-202ENST00000517955 ZNF330Q9Y3S2 320 aaPredicted RBP14.48□□□□□ -0.09
ARFGEF1-202ENST00000517955 IGKV5-2P06315 115 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 AAMPQ13685 434 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 MVPQ14764 893 aaKnown RBP14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 HLFQ16534 295 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 C20orf194Q5TEA3 1177 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 COL23A1Q86Y22 540 aaPredicted RBP14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 ZNF34Q8IZ26 560 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 TMEM57Q8N5G2 664 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 CCDC191Q8NCU4 936 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 PANK1Q8TE04 598 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 CLUAP1Q96AJ1 413 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 SRCIN1Q9C0H9 1055 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 ZBTB3Q9H5J0 574 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 BCL2L12Q9HB09 334 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 ANKRD36CQ5JPF3 1778 aa14.47□□□□□ -0.09
ARFGEF1-202ENST00000517955 CHMP4BQ9H444 224 aaKnown RBP14.46□□□□□ -0.09
ARFGEF1-202ENST00000517955 DDX19BQ9UMR2 479 aa14.46□□□□□ -0.09
ARFGEF1-202ENST00000517955 UTYO14607 1347 aa14.45□□□□□ -0.1
ARFGEF1-202ENST00000517955 NEURL1BA8MQ27 555 aa14.45□□□□□ -0.1
ARFGEF1-202ENST00000517955 PHF14O94880 888 aa14.45□□□□□ -0.1
ARFGEF1-202ENST00000517955 GYS1P13807 737 aa14.45□□□□□ -0.1
ARFGEF1-202ENST00000517955 PARP10Q53GL7 1025 aa14.45□□□□□ -0.1
ARFGEF1-202ENST00000517955 USPL1Q5W0Q7 1092 aa14.45□□□□□ -0.1
ARFGEF1-202ENST00000517955 SLC4A10Q6U841 1118 aa14.45□□□□□ -0.1
ARFGEF1-202ENST00000517955 SMIM5Q71RC9 77 aa14.45□□□□□ -0.1
ARFGEF1-202ENST00000517955 SLC16A10Q8TF71 515 aa14.45□□□□□ -0.1
ARFGEF1-202ENST00000517955 MYD88Q99836 296 aa14.45□□□□□ -0.1
ARFGEF1-202ENST00000517955 ZBTB7BO15156 539 aaPredicted RBP14.44□□□□□ -0.1
ARFGEF1-202ENST00000517955 MNX1P50219 401 aaPredicted RBP14.44□□□□□ -0.1
ARFGEF1-202ENST00000517955 ERICH6BQ5W0A0 696 aa14.44□□□□□ -0.1
ARFGEF1-202ENST00000517955 NLGN1Q8N2Q7 840 aa14.44□□□□□ -0.1
ARFGEF1-202ENST00000517955 ARXQ96QS3 562 aa14.44□□□□□ -0.1
ARFGEF1-202ENST00000517955 SRP68Q9UHB9 627 aaKnown RBP14.44□□□□□ -0.1
ARFGEF1-202ENST00000517955 TM4SF1P30408 202 aa14.43□□□□□ -0.1
ARFGEF1-202ENST00000517955 GCKRQ14397 625 aa14.43□□□□□ -0.1
ARFGEF1-202ENST00000517955 NLRP10Q86W26 655 aa14.43□□□□□ -0.1
ARFGEF1-202ENST00000517955 USP44Q9H0E7 712 aa14.43□□□□□ -0.1
ARFGEF1-202ENST00000517955 CWC25Q9NXE8 425 aaPredicted RBP14.43□□□□□ -0.1
ARFGEF1-202ENST00000517955 COG6Q9Y2V7 657 aa14.43□□□□□ -0.1
ARFGEF1-202ENST00000517955 CWF19L2Q2TBE0 894 aaKnown RBP14.42□□□□□ -0.1
ARFGEF1-202ENST00000517955 ITPRIPQ8IWB1 547 aa14.42□□□□□ -0.1
ARFGEF1-202ENST00000517955 FBXO3Q9UK99 471 aa14.42□□□□□ -0.1
ARFGEF1-202ENST00000517955 COL24A1Q17RW2 1714 aa14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 AFDNP55196 1824 aaKnown RBP14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 ATP5J2-PTCD1G3V325 749 aa14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 H7C1W4 665 aa14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 GRM8O00222 908 aa14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 GNAI3P08754 354 aa14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 TBC1D9BQ66K14 1250 aa14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 CRBNQ96SW2 442 aa14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 SETDB2Q96T68 719 aa14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 ZBTB40Q9NUA8 1239 aa14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 HDAC5Q9UQL6 1122 aa14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 NIP7Q9Y221 180 aaKnown RBP eCLIP14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 UBN2Q6ZU65 1347 aa14.41□□□□□ -0.1
ARFGEF1-202ENST00000517955 PCCAP05165 728 aaPredicted RBP14.4□□□□□ -0.1
ARFGEF1-202ENST00000517955 NEFLP07196 543 aa14.4□□□□□ -0.1
ARFGEF1-202ENST00000517955 CASP7P55210 303 aa14.4□□□□□ -0.1
ARFGEF1-202ENST00000517955 PPP1R42Q7Z4L9 355 aa14.4□□□□□ -0.1
ARFGEF1-202ENST00000517955 ZBTB38Q8NAP3 1195 aaPredicted RBP14.4□□□□□ -0.1
ARFGEF1-202ENST00000517955 CASZ1Q86V15 1759 aa14.39□□□□□ -0.11
ARFGEF1-202ENST00000517955 CARMIL3Q8ND23 1372 aa14.39□□□□□ -0.11
ARFGEF1-202ENST00000517955 CD44P16070 742 aaKnown RBP14.39□□□□□ -0.11
ARFGEF1-202ENST00000517955 NFIXQ14938 502 aa14.39□□□□□ -0.11
ARFGEF1-202ENST00000517955 NYXQ9GZU5 481 aa14.39□□□□□ -0.11
ARFGEF1-202ENST00000517955 C9orf78Q9NZ63 289 aaPredicted RBP14.39□□□□□ -0.11
ARFGEF1-202ENST00000517955 CDHR2Q9BYE9 1310 aa14.39□□□□□ -0.11
ARFGEF1-202ENST00000517955 NTSR2O95665 410 aa14.38□□□□□ -0.11
ARFGEF1-202ENST00000517955 GPTP24298 496 aa14.38□□□□□ -0.11
ARFGEF1-202ENST00000517955 SLC10A5Q5PT55 438 aa14.38□□□□□ -0.11
ARFGEF1-202ENST00000517955 SUSD4Q5VX71 490 aa14.38□□□□□ -0.11
ARFGEF1-202ENST00000517955 MEIS3Q99687 375 aa14.38□□□□□ -0.11
ARFGEF1-202ENST00000517955 UTP14AQ9BVJ6 771 aaKnown RBP14.38□□□□□ -0.11
ARFGEF1-202ENST00000517955 PLA2G12BQ9BX93 195 aa14.38□□□□□ -0.11
ARFGEF1-202ENST00000517955 NBPF7P0C2Y1 421 aaPredicted RBP14.37□□□□□ -0.11
ARFGEF1-202ENST00000517955 HSP90B1P14625 803 aaKnown RBP14.37□□□□□ -0.11
ARFGEF1-202ENST00000517955 TPTE2Q6XPS3 522 aa14.37□□□□□ -0.11
ARFGEF1-202ENST00000517955 EXOC6Q8TAG9 804 aa14.37□□□□□ -0.11
ARFGEF1-202ENST00000517955 NRXN2Q9P2S2 1712 aa14.37□□□□□ -0.11
ARFGEF1-202ENST00000517955 RIC1Q4ADV7 1423 aa14.36□□□□□ -0.11
ARFGEF1-202ENST00000517955 POLRMTO00411 1230 aaKnown RBP14.36□□□□□ -0.11
ARFGEF1-202ENST00000517955 GNAI2P04899 355 aa14.36□□□□□ -0.11
ARFGEF1-202ENST00000517955 UBTFL1P0CB47 393 aaPredicted RBP14.36□□□□□ -0.11
ARFGEF1-202ENST00000517955 R3HDM1Q15032 1099 aaKnown RBP14.36□□□□□ -0.11
ARFGEF1-202ENST00000517955 TRMT112Q9UI30 125 aaKnown RBP14.36□□□□□ -0.11
ARFGEF1-202ENST00000517955 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
ARFGEF1-202ENST00000517955 DDR1Q08345 913 aa14.35□□□□□ -0.11
ARFGEF1-202ENST00000517955 UBE3BQ7Z3V4 1068 aa14.35□□□□□ -0.11
ARFGEF1-202ENST00000517955 KAZALD1Q96I82 304 aa14.35□□□□□ -0.11
ARFGEF1-202ENST00000517955 PDGFDQ9GZP0 370 aaPredicted RBP14.35□□□□□ -0.11
ARFGEF1-202ENST00000517955 MTFR1LQ9H019 292 aa14.35□□□□□ -0.11
ARFGEF1-202ENST00000517955 SERPINB2P05120 415 aa14.34□□□□□ -0.11
ARFGEF1-202ENST00000517955 IRX6P78412 446 aaPredicted RBP14.34□□□□□ -0.11
ARFGEF1-202ENST00000517955 MTX1Q13505 466 aa14.34□□□□□ -0.11
ARFGEF1-202ENST00000517955 RABL6Q3YEC7 729 aaPredicted RBP14.34□□□□□ -0.11
ARFGEF1-202ENST00000517955 BICDL1Q6ZP65 573 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms