RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FRAT1Q92837 279 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P19-201ENST00000517578 ZNF622Q969S3 477 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGB1P19-201ENST00000517578 TRIM11Q96F44 468 aa6.16□□□□□ -1.42
HMGB1P19-201ENST00000517578 MDFIQ99750 246 aa6.16□□□□□ -1.42
HMGB1P19-201ENST00000517578 CHMP4BQ9H444 224 aaKnown RBP6.16□□□□□ -1.42
HMGB1P19-201ENST00000517578 NOP53Q9NZM5 478 aaKnown RBP6.16□□□□□ -1.42
HMGB1P19-201ENST00000517578 NOD1Q9Y239 953 aa6.16□□□□□ -1.42
HMGB1P19-201ENST00000517578 EML1O00423 815 aa6.15□□□□□ -1.42
HMGB1P19-201ENST00000517578 BACH1O14867 736 aa6.15□□□□□ -1.42
HMGB1P19-201ENST00000517578 LAMC2Q13753 1193 aa6.15□□□□□ -1.42
HMGB1P19-201ENST00000517578 TEAD4Q15561 434 aa6.15□□□□□ -1.42
HMGB1P19-201ENST00000517578 NFATC2IPQ8NCF5 419 aa6.15□□□□□ -1.42
HMGB1P19-201ENST00000517578 C7orf43Q8WVR3 580 aa6.15□□□□□ -1.42
HMGB1P19-201ENST00000517578 L3MBTL2Q969R5 705 aa6.15□□□□□ -1.42
HMGB1P19-201ENST00000517578 POLR3GLQ9BT43 218 aa6.15□□□□□ -1.42
HMGB1P19-201ENST00000517578 MARK1Q9P0L2 795 aa6.15□□□□□ -1.42
HMGB1P19-201ENST00000517578 USP17L5A8MUK1 530 aa6.14□□□□□ -1.43
HMGB1P19-201ENST00000517578 LZTS3O60299 673 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P19-201ENST00000517578 ITGB7P26010 798 aa6.14□□□□□ -1.43
HMGB1P19-201ENST00000517578 IRX3P78415 501 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P19-201ENST00000517578 SH3PXD2AQ5TCZ1 1133 aa6.14□□□□□ -1.43
HMGB1P19-201ENST00000517578 BICDL1Q6ZP65 573 aa6.14□□□□□ -1.43
HMGB1P19-201ENST00000517578 UCN2Q96RP3 112 aa6.14□□□□□ -1.43
HMGB1P19-201ENST00000517578 PRR12Q9ULL5 1215 aa6.14□□□□□ -1.43
HMGB1P19-201ENST00000517578 GJA3Q9Y6H8 435 aa6.14□□□□□ -1.43
HMGB1P19-201ENST00000517578 ATP9BO43861 1147 aa6.13□□□□□ -1.43
HMGB1P19-201ENST00000517578 MCCP23508 829 aa6.13□□□□□ -1.43
HMGB1P19-201ENST00000517578 NOS2P35228 1153 aa6.13□□□□□ -1.43
HMGB1P19-201ENST00000517578 PSME1Q06323 249 aa6.13□□□□□ -1.43
HMGB1P19-201ENST00000517578 NFKBIBQ15653 356 aa6.13□□□□□ -1.43
HMGB1P19-201ENST00000517578 TBCELQ5QJ74 424 aa6.13□□□□□ -1.43
HMGB1P19-201ENST00000517578 SYT9Q86SS6 491 aa6.13□□□□□ -1.43
HMGB1P19-201ENST00000517578 SLC9A9Q8IVB4 645 aa6.13□□□□□ -1.43
HMGB1P19-201ENST00000517578 TNS4Q8IZW8 715 aa6.13□□□□□ -1.43
HMGB1P19-201ENST00000517578 TSPYL1Q9H0U9 437 aa6.13□□□□□ -1.43
HMGB1P19-201ENST00000517578 TFIP11Q9UBB9 837 aaKnown RBP6.13□□□□□ -1.43
HMGB1P19-201ENST00000517578 ELOA3CA0A087WX78 387 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 USP17L3A6NCW0 530 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 USP17L4A6NCW7 530 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 ELOA3DA6NLF2 546 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 CLSTN1O94985 981 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 SLC20A2Q08357 652 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 DMTNQ08495 405 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 ELOA3BQ3SY89 546 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 USP17L2Q6R6M4 530 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 LRRC69Q6ZNQ3 347 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 USP17L1Q7RTZ2 530 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 ELOA3Q8NG57 546 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 PLVAPQ9BX97 442 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 KIAA1024Q9UPX6 916 aa6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 CCDC9Q9Y3X0 531 aaKnown RBP6.12□□□□□ -1.43
HMGB1P19-201ENST00000517578 MMP14P50281 582 aa6.11□□□□□ -1.43
HMGB1P19-201ENST00000517578 DNTTIP2Q5QJE6 756 aaKnown RBP6.11□□□□□ -1.43
HMGB1P19-201ENST00000517578 Q8N3U1 123 aa6.11□□□□□ -1.43
HMGB1P19-201ENST00000517578 SECISBP2LQ93073 1101 aaKnown RBP6.11□□□□□ -1.43
HMGB1P19-201ENST00000517578 DNAJC2Q99543 621 aaKnown RBP6.11□□□□□ -1.43
HMGB1P19-201ENST00000517578 SLC30A3Q99726 388 aa6.11□□□□□ -1.43
HMGB1P19-201ENST00000517578 PALM3A6NDB9 673 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P19-201ENST00000517578 ZBTB7BO15156 539 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P19-201ENST00000517578 APPP05067 770 aa6.1□□□□□ -1.43
HMGB1P19-201ENST00000517578 SPATA31C1P0DKV0 1188 aa6.1□□□□□ -1.43
HMGB1P19-201ENST00000517578 SFSWAPQ12872 951 aaKnown RBP6.1□□□□□ -1.43
HMGB1P19-201ENST00000517578 COL9A3Q14050 684 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P19-201ENST00000517578 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P19-201ENST00000517578 CEP120Q8N960 986 aa6.1□□□□□ -1.43
HMGB1P19-201ENST00000517578 MKRN1Q9UHC7 482 aaKnown RBP6.1□□□□□ -1.43
HMGB1P19-201ENST00000517578 GPC6Q9Y625 555 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P19-201ENST00000517578 SERTM1A2A2V5 107 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 ADARB2-AS1A8MUL3 147 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 SIN3BO75182 1162 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 LMOD1P29536 600 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 CLDN10P78369 228 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 SETQ01105 290 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 DOC2BQ14184 412 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 POTEAQ6S8J7 498 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 TICAM2Q86XR7 235 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 TRIM50Q86XT4 487 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 TPCN2Q8NHX9 752 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 TNFRSF25Q93038 417 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 PPP1R12CQ9BZL4 782 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 RRAGDQ9NQL2 400 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 ZNF232Q9UNY5 417 aa6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 MAFBQ9Y5Q3 323 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P19-201ENST00000517578 CCDC102BQ68D86 513 aa6.08□□□□□ -1.44
HMGB1P19-201ENST00000517578 PLEKHM2Q8IWE5 1019 aa6.08□□□□□ -1.44
HMGB1P19-201ENST00000517578 RGS22Q8NE09 1264 aa6.08□□□□□ -1.44
HMGB1P19-201ENST00000517578 RHPN1Q8TCX5 695 aa6.08□□□□□ -1.44
HMGB1P19-201ENST00000517578 TSPAN10Q9H1Z9 355 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P19-201ENST00000517578 YY1AP1Q9H869 796 aa6.08□□□□□ -1.44
HMGB1P19-201ENST00000517578 TMEM51Q9NW97 253 aa6.08□□□□□ -1.44
HMGB1P19-201ENST00000517578 STARD13Q9Y3M8 1113 aa6.08□□□□□ -1.44
HMGB1P19-201ENST00000517578 ARID3CA6NKF2 412 aa6.07□□□□□ -1.44
HMGB1P19-201ENST00000517578 M0R082 166 aa6.07□□□□□ -1.44
HMGB1P19-201ENST00000517578 DYNC1I1O14576 645 aa6.07□□□□□ -1.44
HMGB1P19-201ENST00000517578 ALBP02768 609 aa6.07□□□□□ -1.44
HMGB1P19-201ENST00000517578 RASA1P20936 1047 aa6.07□□□□□ -1.44
HMGB1P19-201ENST00000517578 ALAS2P22557 587 aa6.07□□□□□ -1.44
HMGB1P19-201ENST00000517578 RFX1P22670 979 aa6.07□□□□□ -1.44
HMGB1P19-201ENST00000517578 GATA4P43694 442 aa6.07□□□□□ -1.44
HMGB1P19-201ENST00000517578 MRE11P49959 708 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms