RNA–Protein interactions for RNA: ENST00000517513.5

CASP3-205, Transcript of caspase 3, humanhuman

TSL 5 BASIC

Gene CASP3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-205ENST00000517513 TMX4Q9H1E5 349 aaPredicted RBP17.34■□□□□ 0.37
CASP3-205ENST00000517513 TCERG1O14776 1098 aaKnown RBP17.33■□□□□ 0.36
CASP3-205ENST00000517513 PPEF1O14829 653 aaPredicted RBP17.33■□□□□ 0.36
CASP3-205ENST00000517513 HOXA10P31260 410 aaPredicted RBP17.33■□□□□ 0.36
CASP3-205ENST00000517513 AIMP1Q12904 312 aaKnown RBP17.33■□□□□ 0.36
CASP3-205ENST00000517513 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.36
CASP3-205ENST00000517513 PSMD1Q99460 953 aa17.33■□□□□ 0.36
CASP3-205ENST00000517513 RIC1Q4ADV7 1423 aa17.32■□□□□ 0.36
CASP3-205ENST00000517513 POTEIP0CG38 1075 aa17.32■□□□□ 0.36
CASP3-205ENST00000517513 POTEJP0CG39 1038 aa17.32■□□□□ 0.36
CASP3-205ENST00000517513 PDIA6Q15084 440 aa17.32■□□□□ 0.36
CASP3-205ENST00000517513 HSP90AB3PQ58FF7 597 aa17.32■□□□□ 0.36
CASP3-205ENST00000517513 LDHDQ86WU2 507 aa17.32■□□□□ 0.36
CASP3-205ENST00000517513 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
CASP3-205ENST00000517513 NLRP3Q96P20 1036 aa17.32■□□□□ 0.36
CASP3-205ENST00000517513 TAF1DQ9H5J8 278 aaPredicted RBP17.32■□□□□ 0.36
CASP3-205ENST00000517513 HACL1Q9UJ83 578 aa17.32■□□□□ 0.36
CASP3-205ENST00000517513 FER1L6Q2WGJ9 1857 aa17.31■□□□□ 0.36
CASP3-205ENST00000517513 GRIPAP1Q4V328 841 aa17.31■□□□□ 0.36
CASP3-205ENST00000517513 C3orf67Q6ZVT6 689 aa17.31■□□□□ 0.36
CASP3-205ENST00000517513 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
CASP3-205ENST00000517513 LRP10Q7Z4F1 713 aa17.31■□□□□ 0.36
CASP3-205ENST00000517513 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
CASP3-205ENST00000517513 CLEC11AQ9Y240 323 aa17.31■□□□□ 0.36
CASP3-205ENST00000517513 CHL1O00533 1208 aa17.3■□□□□ 0.36
CASP3-205ENST00000517513 EIF6P56537 245 aaKnown RBP17.3■□□□□ 0.36
CASP3-205ENST00000517513 LARGE2Q8N3Y3 721 aa17.3■□□□□ 0.36
CASP3-205ENST00000517513 ADAMTS8Q9UP79 889 aa17.3■□□□□ 0.36
CASP3-205ENST00000517513 RNF123Q5XPI4 1314 aa17.29■□□□□ 0.36
CASP3-205ENST00000517513 FZD9O00144 591 aa17.29■□□□□ 0.36
CASP3-205ENST00000517513 EPHX2P34913 555 aa17.29■□□□□ 0.36
CASP3-205ENST00000517513 KRT24Q2M2I5 525 aa17.29■□□□□ 0.36
CASP3-205ENST00000517513 HDGFL1Q5TGJ6 251 aa17.29■□□□□ 0.36
CASP3-205ENST00000517513 GPC2Q8N158 579 aa17.29■□□□□ 0.36
CASP3-205ENST00000517513 DDX21Q9NR30 783 aaKnown RBP eCLIP17.29■□□□□ 0.36
CASP3-205ENST00000517513 CREBZFQ9NS37 354 aa17.29■□□□□ 0.36
CASP3-205ENST00000517513 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
CASP3-205ENST00000517513 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
CASP3-205ENST00000517513 ARFGEF2Q9Y6D5 1785 aa17.29■□□□□ 0.36
CASP3-205ENST00000517513 DLG5Q8TDM6 1919 aa17.29■□□□□ 0.36
CASP3-205ENST00000517513 CHPF2Q9P2E5 772 aa17.28■□□□□ 0.36
CASP3-205ENST00000517513 TRMT112Q9UI30 125 aaKnown RBP17.28■□□□□ 0.36
CASP3-205ENST00000517513 HCLS1P14317 486 aaPredicted RBP17.27■□□□□ 0.36
CASP3-205ENST00000517513 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.36
CASP3-205ENST00000517513 SLC10A5Q5PT55 438 aa17.27■□□□□ 0.36
CASP3-205ENST00000517513 PNMA8AQ86V59 439 aaPredicted RBP17.27■□□□□ 0.36
CASP3-205ENST00000517513 NLRP10Q86W26 655 aa17.27■□□□□ 0.36
CASP3-205ENST00000517513 NIM1KQ8IY84 436 aa17.27■□□□□ 0.36
CASP3-205ENST00000517513 PPIP5K2O43314 1243 aa17.26■□□□□ 0.35
CASP3-205ENST00000517513 TCIRG1Q13488 830 aa17.26■□□□□ 0.35
CASP3-205ENST00000517513 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
CASP3-205ENST00000517513 MKRN1Q9UHC7 482 aaKnown RBP17.26■□□□□ 0.35
CASP3-205ENST00000517513 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
CASP3-205ENST00000517513 ABCC4O15439 1325 aa17.25■□□□□ 0.35
CASP3-205ENST00000517513 SH3TC1Q8TE82 1336 aa17.25■□□□□ 0.35
CASP3-205ENST00000517513 CACNA1SQ13698 1873 aa17.25■□□□□ 0.35
CASP3-205ENST00000517513 SNED1Q8TER0 1413 aa17.25■□□□□ 0.35
CASP3-205ENST00000517513 HOXB7P09629 217 aa17.25■□□□□ 0.35
CASP3-205ENST00000517513 DDX46Q7L014 1031 aaKnown RBP17.25■□□□□ 0.35
CASP3-205ENST00000517513 SLC51AQ86UW1 340 aa17.25■□□□□ 0.35
CASP3-205ENST00000517513 HSPA1AP0DMV8 641 aaKnown RBP17.24■□□□□ 0.35
CASP3-205ENST00000517513 HSPA1BP0DMV9 641 aaKnown RBP17.24■□□□□ 0.35
CASP3-205ENST00000517513 SUPT20HQ8NEM7 779 aa17.24■□□□□ 0.35
CASP3-205ENST00000517513 ZNF428Q96B54 188 aa17.24■□□□□ 0.35
CASP3-205ENST00000517513 CFAP44Q96MT7 982 aa17.24■□□□□ 0.35
CASP3-205ENST00000517513 DBF4Q9UBU7 674 aaPredicted RBP17.24■□□□□ 0.35
CASP3-205ENST00000517513 PASKQ96RG2 1323 aa17.23■□□□□ 0.35
CASP3-205ENST00000517513 CCDC88AQ3V6T2 1871 aa17.23■□□□□ 0.35
CASP3-205ENST00000517513 BBOX1O75936 387 aa17.23■□□□□ 0.35
CASP3-205ENST00000517513 AOC3Q16853 763 aa17.23■□□□□ 0.35
CASP3-205ENST00000517513 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
CASP3-205ENST00000517513 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
CASP3-205ENST00000517513 DPP8Q6V1X1 898 aaPredicted RBP17.23■□□□□ 0.35
CASP3-205ENST00000517513 PLBD2Q8NHP8 589 aa17.23■□□□□ 0.35
CASP3-205ENST00000517513 DICER1Q9UPY3 1922 aaKnown RBP17.23■□□□□ 0.35
CASP3-205ENST00000517513 TMEM88BA6NKF7 163 aa17.22■□□□□ 0.35
CASP3-205ENST00000517513 CALD1Q05682 793 aaKnown RBP17.22■□□□□ 0.35
CASP3-205ENST00000517513 COL13A1Q5TAT6 717 aaPredicted RBP17.22■□□□□ 0.35
CASP3-205ENST00000517513 ANKRD13DQ6ZTN6 518 aa17.22■□□□□ 0.35
CASP3-205ENST00000517513 MBIPQ9NS73 344 aa17.22■□□□□ 0.35
CASP3-205ENST00000517513 HYPKQ9NX55 129 aa17.22■□□□□ 0.35
CASP3-205ENST00000517513 APAF1O14727 1248 aa17.21■□□□□ 0.35
CASP3-205ENST00000517513 GRAPQ13588 217 aa17.21■□□□□ 0.35
CASP3-205ENST00000517513 SP8Q8IXZ3 490 aa17.21■□□□□ 0.35
CASP3-205ENST00000517513 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
CASP3-205ENST00000517513 MPNDQ8N594 471 aa17.21■□□□□ 0.35
CASP3-205ENST00000517513 GRAPLQ8TC17 118 aaPredicted RBP17.21■□□□□ 0.35
CASP3-205ENST00000517513 CNTNAP1P78357 1384 aa17.2■□□□□ 0.34
CASP3-205ENST00000517513 NUP98P52948 1817 aa17.2■□□□□ 0.34
CASP3-205ENST00000517513 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
CASP3-205ENST00000517513 ITGBL1O95965 494 aaPredicted RBP17.2■□□□□ 0.34
CASP3-205ENST00000517513 VPS33BQ9H267 617 aa17.2■□□□□ 0.34
CASP3-205ENST00000517513 COL4A5P29400 1685 aa17.2■□□□□ 0.34
CASP3-205ENST00000517513 SCNN1DP51172 638 aa17.19■□□□□ 0.34
CASP3-205ENST00000517513 GNAI1P63096 354 aa17.19■□□□□ 0.34
CASP3-205ENST00000517513 GOLGA2Q08379 1002 aa17.19■□□□□ 0.34
CASP3-205ENST00000517513 TNS4Q8IZW8 715 aa17.19■□□□□ 0.34
CASP3-205ENST00000517513 IFT57Q9NWB7 429 aa17.19■□□□□ 0.34
CASP3-205ENST00000517513 ZNRF3Q9ULT6 936 aa17.19■□□□□ 0.34
CASP3-205ENST00000517513 EPS15P42566 896 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms