RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 FAM200AQ8TCP9 573 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 DNAAF4Q8WXU2 420 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 WASF1Q92558 559 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 DDX11Q96FC9 970 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZFP91Q96JP5 570 aaPredicted RBP2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 PDLIM2Q96JY6 352 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 JAKMIP1Q96N16 626 aaKnown RBP2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 NEK1Q96PY6 1258 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 PSMD1Q99460 953 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 KIF2CQ99661 725 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 MEIS3Q99687 375 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 THUMPD2Q9BTF0 503 aaKnown RBP2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 FSD1Q9BTV5 496 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 TUBB2BQ9BVA1 445 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 SRRTQ9BXP5 876 aaKnown RBP2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 TSPYL1Q9H0U9 437 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 ACBD3Q9H3P7 528 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZSWIM6Q9HCJ5 1215 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 ANO10Q9NW15 660 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 OGFRQ9NZT2 677 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 CWC15Q9P013 229 aaKnown RBP2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 TMEM63CQ9P1W3 806 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 NAP1L2Q9ULW6 460 aaPredicted RBP2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 SPG7Q9UQ90 795 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 TBX22Q9Y458 520 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 LRRFIP2Q9Y608 721 aaKnown RBP2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 ALKQ9UM73 1620 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 DLC1Q96QB1 1528 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 POGZQ7Z3K3 1410 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 ELP1O95163 1332 aa2.42□□□□□ -2.02
RNU1-40P-201ENST00000516816 MROH2AA6NES4 1674 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CLTCQ00610 1675 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 IQSEC2Q5JU85 1478 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CDK12Q9NYV4 1490 aaPredicted RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 SBNO1A3KN83 1393 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 FLT4P35916 1363 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 MSH6P52701 1360 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ERICH2A1L162 156 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 PI4KAP2A4QPH2 592 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 F6X3S4 739 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 FIBPO43427 364 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ATP8B1O43520 1251 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 GIGYF1O75420 1035 aaPredicted RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ERLIN1O75477 346 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZFYP08048 801 aaPredicted RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 TNNT1P13805 278 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 GSPT1P15170 499 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 TATP17735 454 aaPredicted RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CDC25BP30305 580 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 TNNT3P45378 269 aaPredicted RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ME1P48163 572 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 RBM6P78332 1123 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 AKAP17AQ02040 695 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 MKRN3Q13064 507 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 SAFBQ15424 915 aaKnown RBP eCLIP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 STX1AQ16623 288 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 IMMTQ16891 758 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 TSGA10IPQ3SY00 556 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 FOXD4L6Q3SYB3 417 aaPredicted RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 MCMDC2Q4G0Z9 681 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 FILIP1LQ4L180 1135 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 HSP90AB2PQ58FF8 381 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 PPP4R3BQ5MIZ7 849 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 UTP14CQ5TAP6 766 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 JAKMIP3Q5VZ66 844 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 FBXO31Q5XUX0 539 aaPredicted RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CEP135Q66GS9 1140 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CYB5RLQ6IPT4 315 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 PRPF40BQ6NWY9 871 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 LMOD2Q6P5Q4 547 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 FOXD4L3Q6VB84 417 aaPredicted RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ANKRD13DQ6ZTN6 518 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 RALYLQ86SE5 291 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 AACSQ86V21 672 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 NUTM1Q86Y26 1132 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CCDC83Q8IWF9 413 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CEP57L1Q8IYX8 460 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 TMTC2Q8N394 836 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZGPATQ8N5A5 531 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 PI4KAP1Q8N8J0 262 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 SPC24Q8NBT2 197 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 MNS1Q8NEH6 495 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 LINS1Q8NG48 757 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 GPT2Q8TD30 523 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ANKRD24Q8TF21 1146 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 RAPGEF4Q8WZA2 1011 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZNF592Q92610 1267 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 NECTIN2Q92692 538 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 MAP4K1Q92918 833 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 IL17RAQ96F46 866 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 LTV1Q96GA3 475 aaPredicted RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 NEUROD6Q96NK8 337 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 PYM1Q9BRP8 204 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 TEX13AQ9BXU3 409 aaPredicted RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 UPF3BQ9BZI7 483 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 USP44Q9H0E7 712 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 PRM3Q9NNZ6 103 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 IL1RAPL2Q9NP60 686 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms