RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 CHMP3Q9Y3E7 222 aa5.46□□□□□ -1.54
SNORA40.14-201ENST00000516543 GRNP28799 593 aaKnown RBP5.45□□□□□ -1.54
SNORA40.14-201ENST00000516543 SEC13P55735 322 aa5.45□□□□□ -1.54
SNORA40.14-201ENST00000516543 DPYDQ12882 1025 aa5.45□□□□□ -1.54
SNORA40.14-201ENST00000516543 KANK4Q5T7N3 995 aaPredicted RBP5.45□□□□□ -1.54
SNORA40.14-201ENST00000516543 IGFLR1Q9H665 355 aa5.45□□□□□ -1.54
SNORA40.14-201ENST00000516543 ANKIB1Q9P2G1 1089 aa5.45□□□□□ -1.54
SNORA40.14-201ENST00000516543 PTK7Q13308 1070 aa5.44□□□□□ -1.54
SNORA40.14-201ENST00000516543 HINFPQ9BQA5 517 aa5.44□□□□□ -1.54
SNORA40.14-201ENST00000516543 PPP1R12CQ9BZL4 782 aa5.44□□□□□ -1.54
SNORA40.14-201ENST00000516543 TPSG1Q9NRR2 321 aa5.44□□□□□ -1.54
SNORA40.14-201ENST00000516543 RSPO4Q2I0M5 234 aaPredicted RBP5.43□□□□□ -1.54
SNORA40.14-201ENST00000516543 PRRT3Q5FWE3 981 aa5.43□□□□□ -1.54
SNORA40.14-201ENST00000516543 STAG2Q8N3U4 1231 aa5.43□□□□□ -1.54
SNORA40.14-201ENST00000516543 NUDT8Q8WV74 236 aa5.43□□□□□ -1.54
SNORA40.14-201ENST00000516543 GSX2Q9BZM3 304 aa5.43□□□□□ -1.54
SNORA40.14-201ENST00000516543 UBE2OQ9C0C9 1292 aaKnown RBP5.43□□□□□ -1.54
SNORA40.14-201ENST00000516543 PRDM6Q9NQX0 595 aa5.43□□□□□ -1.54
SNORA40.14-201ENST00000516543 DMGDHQ9UI17 866 aaKnown RBP5.43□□□□□ -1.54
SNORA40.14-201ENST00000516543 NAGPAQ9UK23 515 aa5.43□□□□□ -1.54
SNORA40.14-201ENST00000516543 RBM19Q9Y4C8 960 aaKnown RBP5.43□□□□□ -1.54
SNORA40.14-201ENST00000516543 NEUROD1Q13562 356 aa5.42□□□□□ -1.54
SNORA40.14-201ENST00000516543 NKAPLQ5M9Q1 402 aa5.42□□□□□ -1.54
SNORA40.14-201ENST00000516543 LARP1Q6PKG0 1096 aaKnown RBP5.42□□□□□ -1.54
SNORA40.14-201ENST00000516543 CALR3Q96L12 384 aaKnown RBP5.42□□□□□ -1.54
SNORA40.14-201ENST00000516543 KLK14Q9P0G3 267 aa5.42□□□□□ -1.54
SNORA40.14-201ENST00000516543 SLC6A14Q9UN76 642 aa5.42□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L15C9J2P7 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L10C9JJH3 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L13C9JLJ4 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L12C9JPN9 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L11C9JVI0 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L21D6R901 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L18D6R9N7 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L22D6RA61 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L17D6RBQ6 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L19D6RCP7 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L20D6RJB6 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 APBA3O96018 575 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 NFKB1P19838 968 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 LMOD1P29536 600 aaPredicted RBP5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 USP17L24Q0WX57 530 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 TRIM28Q13263 835 aaKnown RBP5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 FOXD4L6Q3SYB3 417 aaPredicted RBP5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 TRAPPC3LQ5T215 181 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 SHISA2Q6UWI4 295 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 FOXD4L3Q6VB84 417 aaPredicted RBP5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 ARXQ96QS3 562 aa5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 DNAJB12Q9NXW2 375 aaKnown RBP5.41□□□□□ -1.54
SNORA40.14-201ENST00000516543 A0A0A0MRY4 1105 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 SPDYE3A6NKU9 549 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 TGFBR3LH3BV60 316 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 LILRB5O75023 590 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 SELPP16109 830 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 IGFBP4P22692 258 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 PLAURQ03405 335 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 RTN1Q16799 776 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 CDCA8Q53HL2 280 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 PSAPL1Q6NUJ1 521 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 ANKMY2Q8IV38 441 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 JPH1Q9HDC5 661 aaPredicted RBP5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 ZFATQ9P243 1243 aa5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.4□□□□□ -1.54
SNORA40.14-201ENST00000516543 ZBTB42B2RXF5 422 aa5.39□□□□□ -1.55
SNORA40.14-201ENST00000516543 IDH3AP50213 366 aa5.39□□□□□ -1.55
SNORA40.14-201ENST00000516543 AFF1P51825 1210 aaKnown RBP5.39□□□□□ -1.55
SNORA40.14-201ENST00000516543 DGKZQ13574 1117 aa5.39□□□□□ -1.55
SNORA40.14-201ENST00000516543 CCINQ13939 588 aa5.39□□□□□ -1.55
SNORA40.14-201ENST00000516543 TMEM132AQ24JP5 1023 aa5.39□□□□□ -1.55
SNORA40.14-201ENST00000516543 IER5Q5VY09 327 aa5.39□□□□□ -1.55
SNORA40.14-201ENST00000516543 KRT25Q7Z3Z0 450 aa5.39□□□□□ -1.55
SNORA40.14-201ENST00000516543 QTRT2Q9H974 415 aaKnown RBP5.39□□□□□ -1.55
SNORA40.14-201ENST00000516543 USP20Q9Y2K6 914 aa5.39□□□□□ -1.55
SNORA40.14-201ENST00000516543 FAM196BA6NMK8 535 aa5.38□□□□□ -1.55
SNORA40.14-201ENST00000516543 DYRK3O43781 588 aa5.38□□□□□ -1.55
SNORA40.14-201ENST00000516543 TARSP26639 723 aaKnown RBP5.38□□□□□ -1.55
SNORA40.14-201ENST00000516543 INPP5BP32019 993 aa5.38□□□□□ -1.55
SNORA40.14-201ENST00000516543 MLLT1Q03111 559 aaPredicted RBP5.38□□□□□ -1.55
SNORA40.14-201ENST00000516543 ZMYM1Q5SVZ6 1142 aa5.38□□□□□ -1.55
SNORA40.14-201ENST00000516543 CFAP70Q5T0N1 1121 aa5.38□□□□□ -1.55
SNORA40.14-201ENST00000516543 ILDR2Q71H61 639 aa5.38□□□□□ -1.55
SNORA40.14-201ENST00000516543 PNMA5Q96PV4 448 aa5.38□□□□□ -1.55
SNORA40.14-201ENST00000516543 VRTNQ9H8Y1 702 aa5.38□□□□□ -1.55
SNORA40.14-201ENST00000516543 A6NJR5 290 aa5.37□□□□□ -1.55
SNORA40.14-201ENST00000516543 CPB1P15086 417 aa5.37□□□□□ -1.55
SNORA40.14-201ENST00000516543 WEE1P30291 646 aa5.37□□□□□ -1.55
SNORA40.14-201ENST00000516543 ADGRE1Q14246 886 aa5.37□□□□□ -1.55
SNORA40.14-201ENST00000516543 MBTPS1Q14703 1052 aa5.37□□□□□ -1.55
SNORA40.14-201ENST00000516543 DMRTC2Q8IXT2 367 aaPredicted RBP5.37□□□□□ -1.55
SNORA40.14-201ENST00000516543 IFT43Q96FT9 208 aa5.37□□□□□ -1.55
SNORA40.14-201ENST00000516543 ZNF777Q9ULD5 760 aaPredicted RBP5.37□□□□□ -1.55
SNORA40.14-201ENST00000516543 LRFN2Q9ULH4 789 aa5.37□□□□□ -1.55
SNORA40.14-201ENST00000516543 SASH3O75995 380 aa5.36□□□□□ -1.55
SNORA40.14-201ENST00000516543 GRIK5Q16478 980 aa5.36□□□□□ -1.55
SNORA40.14-201ENST00000516543 HIF1AQ16665 826 aa5.36□□□□□ -1.55
SNORA40.14-201ENST00000516543 FAM35AQ86V20 835 aa5.36□□□□□ -1.55
SNORA40.14-201ENST00000516543 LPIN3Q9BQK8 851 aa5.36□□□□□ -1.55
SNORA40.14-201ENST00000516543 OPLAHO14841 1288 aa5.35□□□□□ -1.55
SNORA40.14-201ENST00000516543 RGS9O75916 674 aaPredicted RBP5.35□□□□□ -1.55
SNORA40.14-201ENST00000516543 MICAL2O94851 1124 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms