RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 CSRNP1Q96S65 589 aa3.35□□□□□ -1.87
SNORA40.13-201ENST00000516379 RAPGEFL1Q9UHV5 662 aa3.35□□□□□ -1.87
SNORA40.13-201ENST00000516379 HMX2A2RU54 273 aa3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 TULP1O00294 542 aaPredicted RBP3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 AP1G2O75843 785 aa3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 PRNPP04156 253 aa3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 PLAURQ03405 335 aa3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 TBC1D8BQ0IIM8 1120 aa3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 MSMPQ1L6U9 139 aa3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 C1QL4Q86Z23 238 aa3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 AGGF1Q8N302 714 aaeCLIP3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 SHKBP1Q8TBC3 707 aa3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 BHMTQ93088 406 aa3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 FBXL18Q96ME1 805 aa3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 ANGEL1Q9UNK9 670 aaKnown RBP3.34□□□□□ -1.87
SNORA40.13-201ENST00000516379 EML1O00423 815 aa3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 CDK2AP1O14519 115 aa3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 PSPNO60542 156 aa3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 USP17L8P0C7I0 530 aa3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 GLB1P16278 677 aa3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 BRPF1P55201 1214 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 MTFR1Q15390 333 aa3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 WFDC8Q8IUA0 241 aa3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 LPIN3Q9BQK8 851 aa3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 IGFLR1Q9H665 355 aa3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 DNAJB12Q9NXW2 375 aaKnown RBP3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 PARP3Q9Y6F1 533 aa3.33□□□□□ -1.88
SNORA40.13-201ENST00000516379 TRIM66O15016 1216 aa3.32□□□□□ -1.88
SNORA40.13-201ENST00000516379 ZMYND10O75800 440 aa3.32□□□□□ -1.88
SNORA40.13-201ENST00000516379 CFPP27918 469 aa3.32□□□□□ -1.88
SNORA40.13-201ENST00000516379 GRNP28799 593 aaKnown RBP3.32□□□□□ -1.88
SNORA40.13-201ENST00000516379 GDF10P55107 478 aa3.32□□□□□ -1.88
SNORA40.13-201ENST00000516379 KSR1Q8IVT5 923 aa3.32□□□□□ -1.88
SNORA40.13-201ENST00000516379 BRD7Q9NPI1 651 aa3.32□□□□□ -1.88
SNORA40.13-201ENST00000516379 KCNH4Q9UQ05 1017 aa3.32□□□□□ -1.88
SNORA40.13-201ENST00000516379 TMEM132AQ24JP5 1023 aa3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 TSGA10IPQ3SY00 556 aa3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 SIAH1Q8IUQ4 282 aa3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 TP53INP2Q8IXH6 220 aa3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 ZDHHC1Q8WTX9 485 aa3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 SLC4A9Q96Q91 983 aa3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 RSPH6AQ9H0K4 717 aa3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 LMCD1Q9NZU5 365 aa3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 CABP1Q9NZU7 370 aa3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 FRRS1LQ9P0K9 344 aa3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 PIM2Q9P1W9 311 aa3.31□□□□□ -1.88
SNORA40.13-201ENST00000516379 A6NJY4 79 aa3.3□□□□□ -1.88
SNORA40.13-201ENST00000516379 MESP2Q0VG99 397 aa3.3□□□□□ -1.88
SNORA40.13-201ENST00000516379 USP4Q13107 963 aa3.3□□□□□ -1.88
SNORA40.13-201ENST00000516379 UVSSAQ2YD98 709 aa3.3□□□□□ -1.88
SNORA40.13-201ENST00000516379 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.3□□□□□ -1.88
SNORA40.13-201ENST00000516379 FAM35AQ86V20 835 aa3.3□□□□□ -1.88
SNORA40.13-201ENST00000516379 VSIG10LQ86VR7 867 aa3.3□□□□□ -1.88
SNORA40.13-201ENST00000516379 ZNF592Q92610 1267 aa3.3□□□□□ -1.88
SNORA40.13-201ENST00000516379 TTC9Q92623 222 aa3.3□□□□□ -1.88
SNORA40.13-201ENST00000516379 FAM46AQ96IP4 442 aaKnown RBP3.3□□□□□ -1.88
SNORA40.13-201ENST00000516379 GPC6Q9Y625 555 aaPredicted RBP3.3□□□□□ -1.88
SNORA40.13-201ENST00000516379 WDR64B1ANS9 1081 aa3.29□□□□□ -1.88
SNORA40.13-201ENST00000516379 NR1H3Q13133 447 aa3.29□□□□□ -1.88
SNORA40.13-201ENST00000516379 PERM1Q5SV97 790 aa3.29□□□□□ -1.88
SNORA40.13-201ENST00000516379 BHLHE22Q8NFJ8 381 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.13-201ENST00000516379 MYRFLQ96LU7 910 aa3.29□□□□□ -1.88
SNORA40.13-201ENST00000516379 FAM83CQ9BQN1 747 aa3.29□□□□□ -1.88
SNORA40.13-201ENST00000516379 EFCC1Q9HA90 598 aa3.29□□□□□ -1.88
SNORA40.13-201ENST00000516379 TMEM229AB2RXF0 380 aa3.28□□□□□ -1.88
SNORA40.13-201ENST00000516379 CPB1P15086 417 aa3.28□□□□□ -1.88
SNORA40.13-201ENST00000516379 TYRO3Q06418 890 aa3.28□□□□□ -1.88
SNORA40.13-201ENST00000516379 CLEC10AQ8IUN9 316 aa3.28□□□□□ -1.88
SNORA40.13-201ENST00000516379 PROCA1Q8NCQ7 364 aaPredicted RBP3.28□□□□□ -1.88
SNORA40.13-201ENST00000516379 UTP4Q969X6 686 aaKnown RBP3.28□□□□□ -1.88
SNORA40.13-201ENST00000516379 CEP63Q96MT8 703 aa3.28□□□□□ -1.88
SNORA40.13-201ENST00000516379 TOX2Q96NM4 488 aa3.28□□□□□ -1.88
SNORA40.13-201ENST00000516379 PAK6Q9NQU5 681 aaPredicted RBP3.28□□□□□ -1.88
SNORA40.13-201ENST00000516379 CEP126Q9P2H0 1117 aa3.28□□□□□ -1.88
SNORA40.13-201ENST00000516379 SERTAD1Q9UHV2 236 aa3.28□□□□□ -1.88
SNORA40.13-201ENST00000516379 FOSL1P15407 271 aa3.27□□□□□ -1.89
SNORA40.13-201ENST00000516379 SETDB1Q15047 1291 aa3.27□□□□□ -1.89
SNORA40.13-201ENST00000516379 ECM1Q16610 540 aa3.27□□□□□ -1.89
SNORA40.13-201ENST00000516379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.27□□□□□ -1.89
SNORA40.13-201ENST00000516379 L3MBTL2Q969R5 705 aa3.27□□□□□ -1.89
SNORA40.13-201ENST00000516379 SLC38A3Q99624 504 aa3.27□□□□□ -1.89
SNORA40.13-201ENST00000516379 NEUROD4Q9HD90 331 aa3.27□□□□□ -1.89
SNORA40.13-201ENST00000516379 SFI1A8K8P3 1242 aa3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 ZBTB42B2RXF5 422 aa3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 ZSCAN22P10073 491 aaPredicted RBP3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 TEAD4Q15561 434 aa3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 DBX2Q6ZNG2 339 aa3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 FAM20CQ8IXL6 584 aa3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 PHTF2Q8N3S3 785 aa3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 AGBL5Q8NDL9 886 aa3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 TMEM40Q8WWA1 233 aa3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 FAM84AQ96KN4 292 aa3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 GJD4Q96KN9 370 aaPredicted RBP3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 CEP41Q9BYV8 373 aa3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 GSX2Q9BZM3 304 aa3.26□□□□□ -1.89
SNORA40.13-201ENST00000516379 BIN1O00499 593 aa3.25□□□□□ -1.89
SNORA40.13-201ENST00000516379 WISP1O95388 367 aa3.25□□□□□ -1.89
SNORA40.13-201ENST00000516379 NOS2P35228 1153 aa3.25□□□□□ -1.89
SNORA40.13-201ENST00000516379 SKIV2LQ15477 1246 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms