RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 FOXC1Q12948 553 aa5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 C4orf17Q53FE4 359 aa5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 PDE12Q6L8Q7 609 aaKnown RBP5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 BICDL1Q6ZP65 573 aa5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 ZNF438Q7Z4V0 828 aa5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 ZNF598Q86UK7 904 aaKnown RBP5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 EMID1Q96A84 441 aaPredicted RBP5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 SRCIN1Q9C0H9 1055 aa5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 ZFAND3Q9H8U3 227 aa5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 CDK11AQ9UQ88 783 aaPredicted RBP5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 BCS1LQ9Y276 419 aa5.66□□□□□ -1.5
RNU6-27P-201ENST00000516146 TTC24A2A3L6 582 aaPredicted RBP5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 A6NHS1 94 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 OPLAHO14841 1288 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 PHACTR2O75167 634 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 CTSHP09668 335 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 TIMP2P16035 220 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 EPB42P16452 691 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 DNAJA1P31689 397 aaKnown RBP5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 ARID5AQ03989 594 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 XKR5Q6UX68 686 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 USP48Q86UV5 1035 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 VPS37DQ86XT2 251 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 MEIOBQ8N635 442 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 CCDC74AQ96AQ1 378 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 SUSD3Q96L08 255 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 TSEN34Q9BSV6 310 aaKnown RBP5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 KLF16Q9BXK1 252 aaPredicted RBP5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 CUEDC1Q9NWM3 386 aaPredicted RBP5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 FAM8A1Q9UBU6 413 aa5.65□□□□□ -1.5
RNU6-27P-201ENST00000516146 SPATA31C2B4DYI2 1134 aa5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 UBAP1LF5GYI3 381 aa5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 TNFRSF21O75509 655 aa5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 UPP2O95045 317 aa5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 GTF2F1P35269 517 aaKnown RBP eCLIP5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 PTPN12Q05209 780 aaKnown RBP5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 DPH6Q7L8W6 267 aa5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 CYP4X1Q8N118 509 aa5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 GMLQ99445 158 aa5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 DNAJC2Q99543 621 aaKnown RBP5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 POLMQ9NP87 494 aaPredicted RBP5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 GGT7Q9UJ14 662 aa5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 DDX41Q9UJV9 622 aaKnown RBP5.64□□□□□ -1.51
RNU6-27P-201ENST00000516146 TNNI2P48788 182 aa5.63□□□□□ -1.51
RNU6-27P-201ENST00000516146 ST13P50502 369 aaKnown RBP5.63□□□□□ -1.51
RNU6-27P-201ENST00000516146 TAF1CQ15572 869 aaPredicted RBP5.63□□□□□ -1.51
RNU6-27P-201ENST00000516146 SOGA3Q5TF21 947 aa5.63□□□□□ -1.51
RNU6-27P-201ENST00000516146 NOP9Q86U38 636 aaKnown RBP5.63□□□□□ -1.51
RNU6-27P-201ENST00000516146 CMTR1Q8N1G2 835 aaKnown RBP5.63□□□□□ -1.51
RNU6-27P-201ENST00000516146 HSH2DQ96JZ2 352 aa5.63□□□□□ -1.51
RNU6-27P-201ENST00000516146 FOXD3Q9UJU5 478 aaPredicted RBP5.63□□□□□ -1.51
RNU6-27P-201ENST00000516146 RTCBQ9Y3I0 505 aaKnown RBP5.63□□□□□ -1.51
RNU6-27P-201ENST00000516146 USP31Q70CQ4 1352 aa5.63□□□□□ -1.51
RNU6-27P-201ENST00000516146 NCLP19338 710 aaKnown RBP5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 INPP5BP32019 993 aa5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 PHKA2P46019 1235 aa5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 ZNF394Q53GI3 561 aa5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 ARSJQ5FYB0 599 aaPredicted RBP5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 WDR44Q5JSH3 913 aa5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 BTLAQ7Z6A9 289 aa5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 ZNF280CQ8ND82 737 aa5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 DHX38Q92620 1227 aaKnown RBP5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 INSM2Q96T92 566 aaPredicted RBP5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 HIRIP3Q9BW71 556 aaPredicted RBP5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 ELP3Q9H9T3 547 aa5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 ZFYVE28Q9HCC9 887 aa5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 PKD2L1Q9P0L9 805 aa5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 DMGDHQ9UI17 866 aaKnown RBP5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 PCDHGB7Q9Y5F8 929 aa5.62□□□□□ -1.51
RNU6-27P-201ENST00000516146 J3QL48 77 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 SPINT1O43278 529 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 GADD45BO75293 160 aaPredicted RBP5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 USP17L7P0C7H9 530 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 IFFO2Q5TF58 517 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 USPL1Q5W0Q7 1092 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 EPS8L3Q8TE67 593 aaKnown RBP5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 C7orf43Q8WVR3 580 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 PMEPA1Q969W9 287 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 OSBPL7Q9BZF2 842 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 LNPKQ9C0E8 428 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 NPHS2Q9NP85 383 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 PPP4R2Q9NY27 417 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 GJA3Q9Y6H8 435 aa5.61□□□□□ -1.51
RNU6-27P-201ENST00000516146 CADPSQ9ULU8 1353 aa5.6□□□□□ -1.51
RNU6-27P-201ENST00000516146 A0A1B0GTH6 734 aa5.6□□□□□ -1.51
RNU6-27P-201ENST00000516146 STK10O94804 968 aaKnown RBP5.6□□□□□ -1.51
RNU6-27P-201ENST00000516146 IRS1P35568 1242 aa5.6□□□□□ -1.51
RNU6-27P-201ENST00000516146 RACK1P63244 317 aaKnown RBP5.6□□□□□ -1.51
RNU6-27P-201ENST00000516146 TRIP4Q15650 581 aaPredicted RBP5.6□□□□□ -1.51
RNU6-27P-201ENST00000516146 PI16Q6UXB8 463 aa5.6□□□□□ -1.51
RNU6-27P-201ENST00000516146 GALNT12Q8IXK2 581 aa5.6□□□□□ -1.51
RNU6-27P-201ENST00000516146 LINC00528Q8N1L1 170 aa5.6□□□□□ -1.51
RNU6-27P-201ENST00000516146 TMA7Q9Y2S6 64 aaKnown RBP5.6□□□□□ -1.51
RNU6-27P-201ENST00000516146 XYLBO75191 536 aa5.59□□□□□ -1.51
RNU6-27P-201ENST00000516146 ATP4AP20648 1035 aa5.59□□□□□ -1.51
RNU6-27P-201ENST00000516146 GSTT1P30711 240 aa5.59□□□□□ -1.51
RNU6-27P-201ENST00000516146 POU4F2Q12837 409 aa5.59□□□□□ -1.51
RNU6-27P-201ENST00000516146 PWP1Q13610 501 aa5.59□□□□□ -1.51
RNU6-27P-201ENST00000516146 MEI1Q5TIA1 1274 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms