RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 KCNH5Q8NCM2 988 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 PIBF1Q8WXW3 757 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 CCDC47Q96A33 483 aaKnown RBP11.98□□□□□ -0.49
SMG7-215ENST00000515829 TTC41PQ6P2S7 1318 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 MAP3K5Q99683 1374 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 NDUFB9Q9Y6M9 179 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 PTCH1Q13635 1447 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 AMOTQ4VCS5 1084 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 KSR2Q6VAB6 950 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 CHST3Q7LGC8 479 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 CEP126Q9P2H0 1117 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 U3KPZ7 1027 aaPredicted RBP11.97□□□□□ -0.49
SMG7-215ENST00000515829 CCDC171Q6TFL3 1326 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 YEATS2Q9ULM3 1422 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 EFCAB6Q5THR3 1501 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 PTH1RQ03431 593 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 TEX35Q5T0J7 233 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 ZDHHC9Q9Y397 364 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 IFIT1P09914 478 aaKnown RBP11.97□□□□□ -0.49
SMG7-215ENST00000515829 SFPQP23246 707 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMG7-215ENST00000515829 IL17REQ8NFR9 667 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 TNRQ92752 1358 aa11.97□□□□□ -0.49
SMG7-215ENST00000515829 PROSER2Q86WR7 435 aaPredicted RBP11.97□□□□□ -0.49
SMG7-215ENST00000515829 CCDC57Q2TAC2 916 aa11.96□□□□□ -0.49
SMG7-215ENST00000515829 CFAP100Q494V2 611 aa11.96□□□□□ -0.49
SMG7-215ENST00000515829 COPS6Q7L5N1 327 aa11.96□□□□□ -0.49
SMG7-215ENST00000515829 CEP89Q96ST8 783 aa11.96□□□□□ -0.49
SMG7-215ENST00000515829 CCDC94Q9BW85 323 aaPredicted RBP11.96□□□□□ -0.49
SMG7-215ENST00000515829 CEP135Q66GS9 1140 aa11.96□□□□□ -0.49
SMG7-215ENST00000515829 CDC37L1Q7L3B6 337 aa11.96□□□□□ -0.49
SMG7-215ENST00000515829 KIF18AQ8NI77 898 aa11.96□□□□□ -0.49
SMG7-215ENST00000515829 XAGE3Q8WTP9 111 aa11.96□□□□□ -0.49
SMG7-215ENST00000515829 C8orf76Q96K31 380 aa11.96□□□□□ -0.49
SMG7-215ENST00000515829 BICC1Q9H694 974 aaKnown RBP11.96□□□□□ -0.49
SMG7-215ENST00000515829 KCNQ3O43525 872 aa11.96□□□□□ -0.5
SMG7-215ENST00000515829 ANKRD20A12PQ8NF67 263 aa11.96□□□□□ -0.5
SMG7-215ENST00000515829 ERICH2A1L162 156 aa11.96□□□□□ -0.5
SMG7-215ENST00000515829 STX1AQ16623 288 aa11.96□□□□□ -0.5
SMG7-215ENST00000515829 METP08581 1390 aa11.96□□□□□ -0.5
SMG7-215ENST00000515829 RNF17Q9BXT8 1623 aaKnown RBP11.95□□□□□ -0.5
SMG7-215ENST00000515829 SKILP12757 684 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 CCDC129Q6ZRS4 1044 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 TMX1Q9H3N1 280 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 OSBPL3Q9H4L5 887 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 ME3Q16798 604 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 TMC6Q7Z403 805 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 MYRIPQ8NFW9 859 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 CNNM1Q9NRU3 951 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 IQSEC2Q5JU85 1478 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 RIOK3O14730 519 aaKnown RBP11.95□□□□□ -0.5
SMG7-215ENST00000515829 IBTKQ9P2D0 1353 aaPredicted RBP11.95□□□□□ -0.5
SMG7-215ENST00000515829 CHD1O14646 1710 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 ADCK5Q3MIX3 580 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 SSH3Q8TE77 659 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 HMG20BQ9P0W2 317 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 SLC27A2O14975 620 aa11.95□□□□□ -0.5
SMG7-215ENST00000515829 IMMTQ16891 758 aaKnown RBP11.95□□□□□ -0.5
SMG7-215ENST00000515829 EDC3Q96F86 508 aaKnown RBP11.95□□□□□ -0.5
SMG7-215ENST00000515829 NPHP3Q7Z494 1330 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 ALDH1L1O75891 902 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 VPS37DQ86XT2 251 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 CCDC82Q8N4S0 544 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 ANKRD24Q8TF21 1146 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 IDH1O75874 414 aaKnown RBP11.94□□□□□ -0.5
SMG7-215ENST00000515829 TERF1P54274 439 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 ANKRD13DQ6ZTN6 518 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 JMYQ8N9B5 988 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 LINS1Q8NG48 757 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 ZBTB3Q9H5J0 574 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 CUL4AQ13619 759 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 CTNNA3Q9UI47 895 aa11.94□□□□□ -0.5
SMG7-215ENST00000515829 CTAGE5O15320 804 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 APOBRQ0VD83 1088 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 AOPEPQ8N6M6 819 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 TBC1D2BQ9UPU7 963 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 IQGAP1P46940 1657 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 NLRP1Q9C000 1473 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 GOLGA8BA8MQT2 603 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 LIG1P18858 919 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 SBNO1A3KN83 1393 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 CCDC144CPQ8IYA2 1237 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 UBXN4Q92575 508 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 ZSCAN16Q9H4T2 348 aaPredicted RBP11.93□□□□□ -0.5
SMG7-215ENST00000515829 JAK2O60674 1132 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 URI1O94763 535 aaPredicted RBP11.93□□□□□ -0.5
SMG7-215ENST00000515829 HMGB1P09429 215 aaKnown RBP11.93□□□□□ -0.5
SMG7-215ENST00000515829 GPS2Q13227 327 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 HSP90AA4PQ58FG1 418 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 AKAP4Q5JQC9 854 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 CGNQ9P2M7 1197 aaKnown RBP11.93□□□□□ -0.5
SMG7-215ENST00000515829 MTMR6Q9Y217 621 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 QRICH2Q9H0J4 1663 aa11.93□□□□□ -0.5
SMG7-215ENST00000515829 NUP133Q8WUM0 1156 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 PCMTD1Q96MG8 357 aaPredicted RBP11.92□□□□□ -0.5
SMG7-215ENST00000515829 CBX8Q9HC52 389 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 STRN4Q9NRL3 753 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 PRR36Q9H6K5 1346 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 TULP4Q9NRJ4 1543 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 GLI2P10070 1586 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 SLC3A2P08195 630 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms