RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 SAGE1Q9NXZ1 904 aa4.57□□□□□ -1.68
CHD1-211ENST00000514344 TBC1D2BQ9UPU7 963 aa4.57□□□□□ -1.68
CHD1-211ENST00000514344 FAM155AB1AL88 458 aaPredicted RBP4.57□□□□□ -1.68
CHD1-211ENST00000514344 CYP19A1P11511 503 aaPredicted RBP4.57□□□□□ -1.68
CHD1-211ENST00000514344 STYK1Q6J9G0 422 aa4.57□□□□□ -1.68
CHD1-211ENST00000514344 RGMBQ6NW40 437 aa4.57□□□□□ -1.68
CHD1-211ENST00000514344 ZNF530Q6P9A1 599 aaPredicted RBP4.57□□□□□ -1.68
CHD1-211ENST00000514344 L3MBTL2Q969R5 705 aa4.57□□□□□ -1.68
CHD1-211ENST00000514344 CSRNP1Q96S65 589 aa4.57□□□□□ -1.68
CHD1-211ENST00000514344 TONSLQ96HA7 1378 aa4.57□□□□□ -1.68
CHD1-211ENST00000514344 TBC1D8O95759 1140 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 MYCNP04198 464 aaPredicted RBP4.56□□□□□ -1.68
CHD1-211ENST00000514344 ST5P78524 1137 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 SLC39A6Q13433 755 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 PDZRN3Q9UPQ7 1066 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 COL4A5P29400 1685 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 HSP90AB1P08238 724 aaKnown RBP4.56□□□□□ -1.68
CHD1-211ENST00000514344 PKN2Q16513 984 aaKnown RBP4.56□□□□□ -1.68
CHD1-211ENST00000514344 RTKN2Q8IZC4 609 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 LARGE2Q8N3Y3 721 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 SETDB2Q96T68 719 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 ADARB2Q9NS39 739 aaKnown RBP4.56□□□□□ -1.68
CHD1-211ENST00000514344 PITPNM2Q9BZ72 1349 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 FAM177BA6PVY3 158 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 TCERG1O14776 1098 aaKnown RBP4.56□□□□□ -1.68
CHD1-211ENST00000514344 SLC51AQ86UW1 340 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 GPRC5DQ9NZD1 345 aa4.56□□□□□ -1.68
CHD1-211ENST00000514344 NCAPD2Q15021 1401 aa4.55□□□□□ -1.68
CHD1-211ENST00000514344 EN2P19622 333 aaPredicted RBP4.55□□□□□ -1.68
CHD1-211ENST00000514344 C1orf141Q5JVX7 400 aa4.55□□□□□ -1.68
CHD1-211ENST00000514344 FBXO46Q6PJ61 603 aaPredicted RBP4.55□□□□□ -1.68
CHD1-211ENST00000514344 CDC37L1Q7L3B6 337 aa4.55□□□□□ -1.68
CHD1-211ENST00000514344 USP48Q86UV5 1035 aa4.55□□□□□ -1.68
CHD1-211ENST00000514344 H0YGN5 161 aa4.55□□□□□ -1.68
CHD1-211ENST00000514344 TNNT2P45379 298 aaPredicted RBP4.55□□□□□ -1.68
CHD1-211ENST00000514344 MNX1P50219 401 aaPredicted RBP4.55□□□□□ -1.68
CHD1-211ENST00000514344 HIRAP54198 1017 aaPredicted RBP4.55□□□□□ -1.68
CHD1-211ENST00000514344 CCDC102AQ96A19 550 aa4.55□□□□□ -1.68
CHD1-211ENST00000514344 RBM27Q9P2N5 1060 aaKnown RBP4.55□□□□□ -1.68
CHD1-211ENST00000514344 ARFGEF2Q9Y6D5 1785 aa4.54□□□□□ -1.68
CHD1-211ENST00000514344 SHTN1A0MZ66 631 aa4.54□□□□□ -1.68
CHD1-211ENST00000514344 NPR1P16066 1061 aa4.54□□□□□ -1.68
CHD1-211ENST00000514344 NBPF5PQ86XG9 351 aaPredicted RBP4.54□□□□□ -1.68
CHD1-211ENST00000514344 C2orf69Q8N8R5 385 aa4.54□□□□□ -1.68
CHD1-211ENST00000514344 TRPM4Q8TD43 1214 aa4.54□□□□□ -1.68
CHD1-211ENST00000514344 CARD11Q9BXL7 1154 aa4.54□□□□□ -1.68
CHD1-211ENST00000514344 COL25A1Q9BXS0 654 aaPredicted RBP4.54□□□□□ -1.68
CHD1-211ENST00000514344 GBA2Q9HCG7 927 aaPredicted RBP4.54□□□□□ -1.68
CHD1-211ENST00000514344 BCORQ6W2J9 1755 aa4.54□□□□□ -1.68
CHD1-211ENST00000514344 GMPSP49915 693 aaPredicted RBP4.54□□□□□ -1.68
CHD1-211ENST00000514344 PLEKHO1Q53GL0 409 aaPredicted RBP4.54□□□□□ -1.68
CHD1-211ENST00000514344 NPM2Q86SE8 214 aaKnown RBP4.54□□□□□ -1.68
CHD1-211ENST00000514344 KIF24Q5T7B8 1368 aa4.54□□□□□ -1.68
CHD1-211ENST00000514344 PAPPA2Q9BXP8 1791 aa4.54□□□□□ -1.68
CHD1-211ENST00000514344 MYCP01106 439 aaPredicted RBP4.53□□□□□ -1.68
CHD1-211ENST00000514344 EIF5P55010 431 aaKnown RBP4.53□□□□□ -1.68
CHD1-211ENST00000514344 EIF4A2Q14240 407 aaKnown RBP4.53□□□□□ -1.68
CHD1-211ENST00000514344 KRT26Q7Z3Y9 468 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 NIM1KQ8IY84 436 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 BCL2L13Q9BXK5 485 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 ADM5C9JUS6 153 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 MKRN3Q13064 507 aaKnown RBP4.53□□□□□ -1.68
CHD1-211ENST00000514344 AOC3Q16853 763 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 WASHC2AQ641Q2 1341 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 GPR25O00155 361 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 PPIP5K2O43314 1243 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 RAD17O75943 681 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 SLC10A3P09131 477 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 PIP4K2AP48426 406 aaPredicted RBP4.53□□□□□ -1.68
CHD1-211ENST00000514344 CXCL9Q07325 125 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 MPNDQ8N594 471 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 LRCH3Q96II8 777 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 PSMD1Q99460 953 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 TRIM17Q9Y577 477 aa4.53□□□□□ -1.68
CHD1-211ENST00000514344 POLR2AP24928 1970 aaKnown RBP4.52□□□□□ -1.69
CHD1-211ENST00000514344 ANKRD26Q9UPS8 1709 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 ALDH1B1P30837 517 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 NEUROD1Q13562 356 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 RBM26Q5T8P6 1007 aaKnown RBP4.52□□□□□ -1.69
CHD1-211ENST00000514344 SAMD7Q7Z3H4 446 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 AEBP1Q8IUX7 1158 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 LGR6Q9HBX8 967 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 NPC1L1Q9UHC9 1359 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 STARD3NLO95772 234 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 EGFRP00533 1210 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 GTF2E1P29083 439 aaPredicted RBP4.52□□□□□ -1.69
CHD1-211ENST00000514344 ZC3H15Q8WU90 426 aaKnown RBP4.52□□□□□ -1.69
CHD1-211ENST00000514344 R3HDMLQ9H3Y0 253 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 SLC52A2Q9HAB3 445 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 PGAP2Q9UHJ9 254 aa4.52□□□□□ -1.69
CHD1-211ENST00000514344 CNOT7Q9UIV1 285 aaKnown RBP4.52□□□□□ -1.69
CHD1-211ENST00000514344 SCN7AQ01118 1682 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 A0A087WZG4 1122 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 TBC1D10BQ4KMP7 808 aaPredicted RBP4.51□□□□□ -1.69
CHD1-211ENST00000514344 AMOTQ4VCS5 1084 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 INTS3Q68E01 1043 aaKnown RBP4.51□□□□□ -1.69
CHD1-211ENST00000514344 SIN3AQ96ST3 1273 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 POLKQ9UBT6 870 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 KIF20BQ96Q89 1820 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 SOX1O00570 391 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms